Polypterus senegalus (gray bichir): 120530187
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Entry
120530187 CDS
T08668
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120530187 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120530187 (stau2)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120530187 (stau2)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120530187 (stau2)
mRNA cycle factors
Stress granule specific factors
120530187 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
120530187
NCBI-ProteinID:
XP_039610363
LinkDB
All DBs
Position
5:30721867..31078810
Genome browser
AA seq
707 aa
AA seq
DB search
MAQVKVQTAANFSASAMSSTGQSSAVVTVGPLSMQPSMNGSVPASTPSCNSPAAGFVDYT
VPAILPASPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLTLGE
QTWEAEGSSIKKAQHLTAAKALAETTLPKPSPRPPKMDSNSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPIPNYRANYNFRGMFNQRYHYPVPKIFYVQLTVGNSEFIGEGRTRQAAR
HSAAMKALQALRNEPIPEKPPQNQNEKNEAMMDNDASKSEISLVFEIALKRNLPVCFEVI
KESGPPHMKSFVTRVTVGEFSAEGEGNSKKLSKKRAAMSVLEELKKLPFLPTIEKPKLHY
KKRPKTILKTGPEYGQGMNPISRLAQIQQARKEKEPEYVLLSERGMPRRREFIMQVKVNN
EVATGTGPNKKIAKRNAAEAMLLQLGYKASTPIQTQTETSENKGWSGQKSSFPEPATNTQ
KGILHLSPDVYQEMEASRNKAGPGNYLTPKDISQGSGCFFSTTSNTAVIARELLLNGTSP
TAEAIGLKGKAPASPCASVQPSQQLDYLARIQGFQVQYNDRQNGKECLTYLTLSPVQMTF
HGIGSSIEASHDQAALRALKQLSEQGLDPVEGTMKVENGSRENQSVPVVLCQNLTFYPSS
SATSEEVPSTTARYIVQQVIHLGEKADNKQTNSGTTAQDCKDSKAVV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagtgaaagtgcagacagcagcaaacttctctgcatctgcaatgtcatctaca
ggacagtcatcagcagtggtgactgtaggtccactcagtatgcaaccctctatgaacgga
tcagttccagcctcaactcccagctgtaacagtcctgcagctgggtttgtggactatact
gttcctgcaattttaccagcttctcctcaggaaaacatggcaaaccccaaagagaaaact
ccaatgtgtctggtaaatgagttagcccgtttcaatcgaattcagccacagtacaagctc
ctaaatgaacgagggccagcacatgctaagatcttcactgtgcagctgacacttggagag
cagacgtgggaggcagaaggaagcagcataaagaaggcacaacatttaacagctgccaaa
gctctggctgaaacgacgctccccaagccatcacctcgaccgcctaaaatggacagtaac
agtaacccaggaagtataaccccaaccgtggagctaaatggccttgcaatgaaaagagga
gaacctgccatctataggccattggatccaaagccaattcccaattacagagccaactat
aacttccgaggaatgttcaatcaaaggtatcattacccagtgcctaagatattttatgtg
cagctgactgtggggaatagtgagtttataggggaaggaaggacacgtcaggctgccaga
cacagtgctgctatgaaagccctccaagcacttcggaacgagcccattcctgaaaagcca
cctcagaaccaaaatgaaaagaatgaagccatgatggacaatgatgccagtaaatctgaa
ataagcctagtatttgaaattgcactgaagcgaaacctacccgtctgttttgaggtgatt
aaagagagtggcccgccccatatgaagagctttgtcactcgagttacagttggagagttt
tctgctgaaggagaagggaacagcaaaaaactttccaaaaagcgagctgcaatgtctgta
cttgaggagctaaaaaaactcccatttcttccaacaatagaaaaacctaaacttcattac
aagaaacgccccaagactatactaaagactggcccagagtatggacaaggtatgaaccca
atcagtcgcctggcccaaattcaacaagcaagaaaagaaaaggaaccagaatatgtgctt
ttatctgaacgaggaatgccccgtcgccgtgaatttatcatgcaggtgaaagtcaacaat
gaagttgctactggcaccggcccaaataagaaaattgcaaaacgcaatgcagcagaagca
atgttactgcagcttggttacaaagcatctactccaatacagactcaaactgagacgtct
gagaacaaaggctggagtggacaaaaatcatcttttcctgaaccagcaacaaacacgcaa
aaaggaatactccatctttctccagatgtctatcaggagatggaagcaagcagaaataaa
gctggtcctggaaattacctgaccccaaaagacattagccaaggttctggctgtttcttt
agcaccaccagcaacacagcagtcattgccagggagctcctgctcaatgggacctcccca
acagctgaagccataggtcttaaaggaaaggcacctgcttcaccctgtgcctctgtacag
ccttctcagcagctggactacttggcaaggattcaaggctttcaggtgcagtataatgat
cgacaaaatggcaaagagtgcttgacctacttaacgctttcacctgtgcagatgactttc
catggcattgggagctccattgaggctagccatgatcaggcagctctaagggccttgaaa
cagctgtcagaacaaggactggacccagtggaaggcacaatgaaggtggaaaacggatca
cgagaaaaccaaagcgttcctgttgtattgtgtcagaatctcacattctacccttcttct
tctgctacttctgaagaagtacccagcaccacagcaagatatatagtacaacaagtgatc
catctgggcgagaaggcagacaataaacagactaactcaggcaccactgctcaggactgc
aaggattcaaaggctgtcgtctag
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