Polypterus senegalus (gray bichir): 120530247
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Entry
120530247 CDS
T08668
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120530247 (chd7)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120530247 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
120530247
NCBI-ProteinID:
XP_039610501
LinkDB
All DBs
Position
5:45110344..45281601
Genome browser
AA seq
3029 aa
AA seq
DB search
MADPGMMSLFGDDANLFSEGLEGLGDCGFTEGQVNPLGQQLSIDQGYGPLQSSLHHTQQP
PPNQGQPKLSHFDHFSQYEQQKMHLMEQGGRMLGNAPGNGMSSPHSQYHNPPPSVAHSGG
GQIGVYPGLQSERHNQPFVDGGSLWAPRAEPVRASFQQQQPPPPQQPTPSGPQGHVQQMG
PYMARGDFSMQTHNQAPTPPRMNQFSQGPPQEGGRGPQTNHFLGHMPPQQNPNMVGPSMR
HPVQQQPPPQQFHHRPSPAALHPDTVAHSPRFSPSPSQQQQQQQQAVVAGRPQQGLGFGS
RNQTVPSPTVNNSGQYSPYPPYSNLNQGLVNNTGMSPNIGLTSNNAPMSQGSVVPHYPNT
GVGFPAGAPQGLMHQQSMHVNQINSQPMHPSQQQPAQQQQPQGSYGSPPPMSPMKAMSNP
AGTPPPQQVRPGSAGIGLEVGGYPSMPHQPPGAMGLSQRTVGPRSLQQQPPPPQPYMGLS
PSQREMAGALRPTGGLGNNHVEPPGMQDQRLLLGPPQPHPGQQLPPPLPFQKQMTTCHSV
QQPPHLGLHLQSSPPQHPHHQPWAQQHQSPPTPQKVPIPQLSPSDSSIDTHPSDMTHTLG
QNAQMIKCDDQLMLDQKQKKKKKKKVNRINTGDILNDTGAEHFHDGLDLMGAVADGLSEE
KKKKKKPKEKKEPKEPKPPKAPKPPKTPKEPKEKKVKVINPKPKSTKKTSVKKSDQEAST
TKKKDGKRKRESSDNSDLEKTPPPSPEEEDDSGVQKRRSSRQVKRKRYTEDLEFKISEDE
ADDADAAGRKSPSNASQSEQQESLEAEGPVVEKIMSMRMGKKQVESGEVEVEEFYVKFKN
FSYLHCRWADLEELEKDRRIHQKIKRFKAKQSLNKFLSEIDDEPFNPDYVEVDRILDVSH
STENGEPVMHYLVKWCSLPYEDSTWELRQDIEPGKIEEFEKLFAREPEMNRVERPPSSDW
QKSESSREYKNGNALREYQLEGLNWLLFNWYNARNCILADEMGLGKTIQSITFLYEIFLK
GIHGPFLVIAPLSTIPNWEREFHTWTELNVVVYHGSQGSRRMIQTYEMYFRDPQGRIIKG
AYKFHAVITTFEMILTDCPELRNIQWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLT
GTPLQNTVEELFSLLNFLEPERFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKED
VEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGSAGSGNANVPNLLNTMMELR
KCCNHPYLINGAEEKILDEFRETHQSDYPDFHLQAMIQAAGKLVLIDKLLPKLKAGGHRV
LIFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKAS
LKLGLDKAVLQSMSGRENAANGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQ
ILQRRTQTITIESEGKGSTFAKASFVSSGNRTDISLEDPDFWQKWAKKAELDMDVINGRN
NLVIDTPRIRKQTRHFSSVKEDELMEFSELESDSEDKPNPKPRRPQDKSQGYPRSECFRV
EKNLLVYGWGRWTDILSHGRFKRHLMEQDVETICRAVLVYCLNHYKGDENIKSFIWDLIT
PTEDGQTRALQNHSGLSAPVPRGRKGKKVKTQTAQPVVQQADWLVSCNPDALFQDDSYKK
HLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGIDSSEIDIWIPQPFHAELPTDWWNKE
ADKSLLIGVFKHGYEKYNSMRADPALSFLERVGMPDAKAIAAEQRGSDMMTDGADGGDFD
REDEDPEYKPARMPFKDEMDEFANSPLDEKDDVAEPDNTGKCENAELGKLYWPNASSLTT
RLRRLITAYQRSYKREQMRQEAMTKTDRRRRRPREEVRAMEAEREAIITERRQKWTRREE
ADFYRVVSTFGVMFDPGKRRFDWNQFRAFARLDKKTDDSLEKYFYAFVAMCRRVCRMPLK
SDEEPPDPMQLIEPITEERASRTLYRIELLRKIREQVLPHPELDERLKLCQTSLDLPEWW
ENGKHDKDLLLGASKHGVSRTDYHILNDPELSFLEAHRNFAQNKSSSQLGSTSLLCPTPL
LVPTSAPLIKKEDERENASLNLDETRSQGSSEKSDGVASLKAKEEEEQEEKSIEVTTKME
ELENTNSEMKKPLSEDPVTHIDTEPKSLSEKGSEEEDEEKIEDDDKSEESSQAEACVPSR
SKNFDEESNASLSTARDETRDGFYGEDGDASMTHILHERSYSFSFWPKDRVMINRLDNIC
EAVMKGKWPVNRRQLFDFPGLLPGYTPSATDSPLQRRSFAELSMVGQATYSGSEDITLSP
QISKENALNMAVPRQRRRRRRKVEIEAERAAKRRNLMEMVAQLRESHVASESHSKAVDLS
KALREATSSTSNLSSVASKFLLPHASSPTVDAFKTQMELLQAGLSSTPVRHLMNGTLPDG
DLPIKRRRGRRRNVEGLDLLFLGNKRASLNAEDAEVTKAYDDGVPTPPQTQRNIPSPGQL
DPNAHIPVISLEDGTRLVGEDAPKNKDLMEWLRQHPTFTVDMPSYVPKTEDLLLSPFQKP
KQKRHRCRNPNKIDINTLTGDERVPVVNRRNGKKMGGAMAPPMKDLPRWLEENPEFAVAP
DWTDIVKQSGFVPESMFDRLLTGPVIREEGACRRGRRPKSEIAKAAAQAAAATAAAASPG
INPLLMNSLFAGMDLTSLQNLQNLQSLQLAGLMGFPHGLAAAAAAAGSGGDAKHAAAMLP
LMMPGMAGLPNMFGLGGLFNNNIAAATAAASSTASSTGQSEVEDGTSKSEEKKDEEYEDK
ETEKPGETNTDGSVNAAAAAAAAAASAGISNNPLAFNPFLLSTMAPGLFYPSMFLPHGLS
GLTLPGFSQATLAGLQNAIGGSGGEEKVNKDSNPGTKDEDGENALEDSDTDESQNKTAES
SVLEDELAPAEELDSLDGGDEVDEEGTNE
NT seq
9090 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctggaatgatgagcttatttggcgatgatgcaaatctcttcagtgaaggg
ctagaaggtctgggtgattgtggcttcacagagggtcaggtcaaccctttgggacagcag
ctttctattgaccagggatatgggccacttcagtcatctctacatcacacacagcagcca
cctcctaaccaaggacaacccaagttgagccactttgaccattttagccagtatgagcag
cagaagatgcacttgatggaacagggagggcgtatgctggggaatgcccctggaaatgga
atgtcatcccctcattctcagtaccacaatccaccaccatctgttgcccacagtggtggg
gggcagattggagtctacccaggtcttcagagtgaaaggcataatcagccttttgtggat
ggaggttctctgtgggctcccagggctgagcctgtgagagcttcatttcagcaacagcaa
cctccacctccacagcaacctaccccttctggtcctcaaggtcatgtacaacagatgggc
ccatacatggctcgaggggatttctccatgcaaacgcacaaccaggcacccacccctccc
cgaatgaaccagttttctcaaggcccaccacaggaaggaggcagggggccccagactaac
cactttctaggacacatgcccccacaacagaaccccaatatggttggtccatctatgcga
catccagtccaacagcagccgccaccacagcagtttcaccatcgaccttctccagctgct
ctgcaccctgacacggtagcccacagccccaggttttctcccagtccctcccagcagcag
cagcagcagcagcaagcagtagtagctggtagaccacagcaaggtcttggctttggctca
cgaaatcagacagtcccttctccgactgtaaataactcagggcagtattctccataccct
ccatatagcaatctcaatcagggattagtgaataatacaggcatgagtcccaacatcggc
cttaccagcaacaacgcacccatgtctcaagggtctgtggtgcctcattatccaaacaca
ggcgttggatttccagctggagctcctcaggggctcatgcatcaacagtccatgcatgtg
aaccaaatcaattcccagcctatgcatccatctcagcagcaaccggctcaacagcagcag
cctcagggatcctatgggtctccaccaccaatgtctccaatgaaggctatgagcaatcca
gctggtactccacccccacagcaggtgcggcctggcagtgcaggcattggtttagaggta
ggtggctatcccagcatgcctcaccagccaccaggagccatggggttgtcgcaaagaacc
gtgggacccaggagtttgcaacagcagccaccacctccacagccctacatgggcctatcc
cctagccagagggaaatggctggggctttaagacccactggaggtttggggaacaatcac
gttgagccgccaggaatgcaggatcagcggcttctattgggtcccccacagcctcaccct
ggacaacaactgccaccaccactgccttttcagaaacagatgacaacctgccattctgtg
caacagccgccacatctaggtttgcatcttcagagctctcctccccagcaccctcaccat
cagccatgggctcagcaacatcagtctccacctacaccccagaaagtgcctatcccacag
ctttctccatcagattcctccattgatacacatccatcagacatgactcatactcttggc
cagaatgctcagatgattaaatgtgatgaccaactaatgttggaccagaaacaaaagaaa
aagaaaaagaagaaagtgaatcgcataaacacaggggacatcctgaatgatactggcgca
gaacattttcatgatggacttgacctgatgggtgctgtagctgatggattgtctgaagag
aaaaagaaaaagaaaaagccaaaagagaagaaagagcccaaggagccgaaacctcccaaa
gcccccaagcctcccaaaacaccaaaagaacctaaagagaaaaaagtcaaagtaatcaac
cccaaacctaaaagtactaagaaaaccagtgtcaagaaatcggatcaagaggcaagcact
acaaagaaaaaggatgggaaacgcaaaagagagtcctctgacaactcagacctggaaaaa
acgccacctccctcaccagaggaggaggatgattctggtgttcagaagaggcgctcaagc
cggcaagttaaaaggaagagatacacagaggatctggagttcaagatctctgaagatgag
gcagatgatgcagatgctgctggaaggaaatctccatcaaatgcttcacagtcagagcaa
caggagtctcttgaggctgaaggacctgttgttgaaaaaattatgagcatgcgcatgggc
aagaaacaggtggagtctggagaagtggaagttgaagaattctatgtcaaattcaaaaac
ttttcataccttcattgtcgatgggctgatttggaagaacttgagaaagacaggaggatt
catcagaagataaaacggtttaaagccaagcagtccctcaacaaatttctcagtgagatt
gatgacgagccattcaatccagactatgtagaagtggacagaatcttggatgtttctcat
agcactgaaaatggagagcctgtaatgcactatcttgtgaaatggtgctctcttccttat
gaggacagcacttgggaactaaggcaggatattgagcccggaaagattgaggagtttgag
aaactgttcgcaagggagcctgaaatgaatcgtgtggagcgaccaccttctagtgactgg
cagaaatctgagagttcgagggaatataaaaatggcaatgcactcagggaatatcagctg
gaagggcttaattggctgctcttcaactggtacaatgcacgaaactgtattttagcagat
gagatgggtttgggaaagaccattcagtcgatcacatttctgtatgaaatattcttgaaa
ggaattcatggtcctttcttggtaattgcccccctgtccactattcctaactgggaacgg
gagtttcacacgtggacagagctgaatgtggtagtatatcatggaagccagggaagtcga
cggatgatacagacatatgaaatgtattttcgagatcctcagggacgtattataaaggga
gcttataaattccatgctgttatcaccacctttgaaatgatactaactgactgtcctgaa
ctgcgaaatattcagtggagatgtgttgtaattgatgaggcgcataggttaaagaacaga
aattgcaagctgctagaaggtcttaaaatgatggacctggagcataaagttttattaact
gggactcctctgcagaacactgttgaagaactttttagtttattgaatttcttagaacct
gagagatttccatcagaaacaactttcatgcaggagtttggggacttgaaaacagaagaa
caggtacaaaaactccaagccattttaaaaccaatgatgttgcggcggcttaaggaagat
gtcgagaagaacctggcaccaaaggaagagactatcattgaggttgagcttacaaacatt
cagaaaaagtactacagagcaattctagagaagaattttgcctttctctcaaaaggagga
tcagctggcagtggaaacgcaaatgtgccgaaccttttaaacactatgatggagctccga
aaatgctgcaaccatccttaccttattaatggtgctgaagagaagattctggatgaattc
agggagactcaccagtccgactatccagattttcacctccaggcaatgatccaggctgct
ggaaagctcgtactgattgacaagctgctgccaaaactgaaggctggtggccacagggtg
cttatcttttcccagatggtgcgttgcctggacattttggaggactacctcatccagaaa
aggtacccttatgagcgtattgatggaagagttaggggaaacctacgacaagcagctata
gataggttctccaggccggattctgacagatttgtcttcttgctgtgtacaagagcaggt
ggtttgggcataaatctcactgcagcagatacatgcatcatctttgattctgattggaac
cctcaaaatgatttgcaggctcaggcgcgatgtcatagaatcgggcagagcaaagctgtc
aaaatttatcgattaataacccggaattcatatgaaagggaaatgtttgacaaagcaagt
ttgaagctgggcttggataaggctgttttgcagtcaatgagtggaagagaaaatgctgcc
aatggggtgcaacagctttctaagaaagaaatagaagatctccttcgcaaaggggcctat
ggtgcattaatggatgaagaggatgaaggatccaaattttgtgaggaagatatcgatcaa
atccttcagaggcgaacccagactattaccatagagtctgaaggaaaaggttccactttt
gcaaaggccagctttgtatcatctggcaatcgaacagatatatctttggaagatcctgac
ttctggcaaaaatgggctaagaaggcggagctagatatggatgtgattaatggaagaaac
aacctagtcattgatacacccagaatcagaaaacaaacgcggcacttcagctcagttaaa
gaggatgagctaatggagttctcagaactagagagcgattctgaggataagcctaatcca
aagccacgaaggcctcaggacaagtctcaaggttatcctagaagtgagtgctttagagtg
gagaagaatttgcttgtctatggttgggggcgatggactgatatcttgtctcatgggcgg
tttaagcgccatttgatggaacaagatgtggaaaccatctgccgagctgtccttgtctac
tgcctgaatcattacaagggagatgaaaatatcaaaagcttcatttgggacctgatcacc
cctactgaagacgggcagactcgtgcactacagaatcactcagggttgtctgcaccagtg
cccagagggcgtaaaggaaagaaggtgaaaacacagactgcacaacctgttgtgcagcaa
gccgattggcttgtaagctgtaacccagatgcacttttccaggatgacagctacaagaag
cacctgaaacaccattgcaacaaggtcctactgcgggtccgcatgctctactatctcagg
caagaagtaataggtgatcaggcagacaggatcttggagggcatagattcaagtgaaata
gacatttggattccacaaccattccatgctgagctgcctacggattggtggaataaagaa
gccgataaatctctgttgattggagtatttaaacatggttatgaaaagtacaactctatg
cgagcagacccagctctctcttttttagagagggttgggatgcctgatgccaaggccatt
gctgcagaacagagaggatctgacatgatgacagatggtgctgatgggggagactttgat
agagaagatgaagatccagaatacaaacctgccagaatgcctttcaaagatgaaatggat
gaatttgccaactctcctttggatgaaaaagatgatgtggcggagccagataatacaggc
aagtgtgaaaatgcagagttgggtaaactttactggccaaatgcttcatcactgaccacc
aggctaagacggctcattacagcgtatcagcgaagttacaagagggagcagatgaggcaa
gaagccatgacgaagactgatcgaagaagacgtcgtccccgagaagaagtgagagcgatg
gaggcagaaagggaagcaattataacagagcgacgtcaaaaatggactcgtagagaggaa
gcagatttttaccgcgtggtatccacttttggggtcatgtttgacccaggaaaaagaaga
tttgattggaatcagtttcgtgcctttgctcgtttggataagaaaacggatgatagttta
gagaagtacttctatgcgtttgttgctatgtgccgaagagtttgtcgaatgcctttgaag
tctgatgaagaaccaccagaccctatgcagcttattgaaccaatcacagaggagcgtgct
tctagaactctgtaccgcattgaactgttgcgcaaaatacgagagcaagttctaccccac
ccagagctagatgaacgcttgaagttatgccagactagccttgaccttccagagtggtgg
gagaatggaaaacatgacaaggacttgctgctaggtgcatcaaagcatggtgtcagcagg
actgattaccacatattaaatgatcctgaactttctttcttagaagcccataggaacttt
gctcaaaacaaaagcagtagccaactgggcagcacaagtttactctgtccaacaccatta
ttggtccctacttctgctccccttattaaaaaggaagatgagcgggaaaacgcctcacta
aatcttgatgagactagatcacagggatccagtgaaaagagtgatggagttgcatctctt
aaagctaaggaagaggaggagcaggaagaaaagtcaattgaagtgacaaccaaaatggag
gagttggagaacacaaactctgaaatgaaaaagcctttatcagaggacccggtaacccat
attgatacagagccaaagtcattatctgaaaaaggctctgaagaggaggatgaggaaaag
attgaagatgatgataaatctgaggaatcatcccaggctgaagcttgtgtaccatctcgg
agtaagaattttgatgaggagagtaatgcatcattaagcactgcacgtgatgaaacccgt
gatggcttctatggtgaggatggtgatgcctcaatgactcacattcttcatgaaaggtcc
tattccttttcattttggccaaaggaccgagttatgatcaatcgcttggataacatctgt
gaagccgtgatgaagggaaaatggcctgtaaataggcgtcagctgtttgatttcccaggg
ctactccctggatacactccttcagctacagacagccctctgcagaggaggagttttgca
gagctttcaatggtgggccaggccacttatagtggcagtgaagatatcactctttcaccc
cagatttcaaaggaaaatgcacttaatatggctgttcctcggcagcgacggcgacgtaga
aggaaagttgaaattgaagcagagagagcagccaaaaggagaaatctaatggagatggtg
gcccaactgagagaatctcatgtggcctcagagagccacagcaaagctgtggacttgtca
aaagccttgcgagaagcaaccagctctacctcaaacctgtcttctgttgcttccaagttt
ctcttgccccatgcctctagccccactgttgatgcctttaaaactcaaatggagctattg
caagctggtctttctagcactccagtcagacaccttatgaatggcacacttccagatgga
gaccttccaataaagagaaggagaggcagaaggagaaacgtggagggccttgatttgctc
ttcttgggtaacaagagagcttcattaaatgctgaggatgctgaagtgaccaaagcttat
gatgatggagtgcccacccctccgcaaacgcagagaaacattccttctccaggacagttg
gacccaaatgctcatatccctgtcattagtctagaagatgggaccaggcttgttggagaa
gatgctcctaaaaataaggacttgatggaatggcttagacaacacccaacattcactgtt
gatatgccaagttatgtaccaaagactgaagatttgcttctgtcaccgtttcagaagcca
aagcagaagagacatagatgtagaaaccccaacaaaatagatattaacactttgacaggg
gatgagagagtgcctgttgtaaatagaagaaatggaaaaaagatgggtggagctatggcc
cctccaatgaaggatcttcctagatggcttgaagaaaatccagaatttgcagttgctcca
gattggacagatattgttaagcaatctggttttgttccagaatctatgtttgatcgtctt
cttactggtccagtaataagagaagaaggagcgtgtcgtcgaggtagaaggccaaaaagt
gaaattgccaaggcagctgcacaagctgcagcagctacagctgctgctgcctctcctggt
atcaatcctctactgatgaacagcttatttgcaggaatggaccttaccagcttacagaat
cttcagaatttgcagagtttgcagttagctggcttgatgggcttccctcatggtctagca
gctgctgcagctgcagctggtagtggaggggatgctaaacatgcagctgccatgcttccc
ttgatgatgcctggaatggcagggctgcccaacatgtttggactgggaggactctttaac
aataatattgcagcagccacagctgctgcatctagcacagcttcctcaacaggccagagt
gaagtagaagatgggacttcaaaatctgaggaaaaaaaggatgaggagtatgaagataaa
gaaactgagaaacctggcgagacaaatactgatggttcagtgaatgcagctgcagcagcc
gctgcagcagccgctagtgctggaatatctaataatcctctggcctttaatccctttttg
ctatctacgatggctcctggtcttttttacccttcaatgtttcttcctcatggtttgagt
ggccttaccctcccaggattctcacaggccactttggcgggtctacagaatgccattgga
ggcagtggtggggaggagaaggtaaataaagattctaaccctggcaccaaggatgaagat
ggagaaaatgccttggaagacagtgacacagatgagagccagaacaagactgctgaatct
tcagtactggaagatgaacttgctccagctgaagaacttgattctcttgatgggggagat
gaagtagatgaggaagggacaaatgaataa
DBGET
integrated database retrieval system
