Polypterus senegalus (gray bichir): 120530287
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Entry
120530287 CDS
T08668
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120530287 (trpa1b)
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120530287 (trpa1b)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
120530287
NCBI-ProteinID:
XP_039610586
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Position
5:complement(53954064..54052070)
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AA seq
1106 aa
AA seq
DB search
MPCEKEMQNSYECVINEDDSTQVTPDIFKIILSGDASSLQNLIRRDPSCLSSVDASSSRP
IHYAASSGQIQMIHLIVNVTGLAEINANDEKGNTPLHSAVEKDQFESCKTLLELGADPNI
LNSLLMSPLHMAISLRHNQIIQLLVSQNNTDLNLEGDLGNSPVMLACSIDNHDALSTLLL
YGARLCSQNKLGHFAVHAAAFAGSKKCLEIVLKKGEELGYSFEHHLNFTDKSCSSPLHLA
VHGGNIEVIKFCIDNGAKVDLQQNDKSTALHFACSQGAIDVVKLMLSSCKQEDNVINIID
GGHQTPLHKAVIFDHIELVQYLVSKGAGIDNIDCECHTPLLLATSCGAWKSVEFLVLKGA
NVKKKDSAGCNFLHLAIQQPKGLKNLSDSILQRKEVMALLDDKDNEGCSPLHYACKLGVP
DSVNNMLGLKVSISLKSKDKKSPLHFAAAFGRINTCQRLLERMKDTRLLNEGDEKGMTPL
HLAAQNGHTRVVEILLRKGALFLCDHKGWTCFHYAAEEGYTQTMKILLETNIKLMDKADE
DGNTALHLAAREGHAAAVALLLNKGAEINLNKSEGSFLHEAIYRGRKEVAFVAIGSERSH
ETLTTYKPGSVKKVPVLDMIEHLPEAAKMLLDKAIQESDDDVNSENYHINYNFKYLQCPL
SYKKLAEEDKKYTYHPLAAMNTMVRFKRVDLLTHPVCKKYLQMKWVAYGLKAHVLNLVIY
TFGLLPLTTLIVKMRPKTNFTTEDNLRVNNDLKDKENYLLTVCMILVLIMSLYAVGKEIV
QIFQQRCRYFFDYSNGLDWAAAITSLLFVLPMLFNVKDTWHWQFGAVAIFISWLNYLLYM
QRFENFGIYVVMFGEILRTLIRIVLVFFFLILAFALSFYALMIEQRNYRTIPVSVMQTFA
MMLGEISYQDNFLVPFLNGRMAFPPLTFIALVWFLLLVPILLMNLLIGLAVGDIAEVQRN
ACLKRIAMQVDLHTSLEEKLPYWFMRRVDQDIVTVYPNKVCGSKMPFFFNLNAASDLLPK
LESGDCASPIEFELKKQKFRLKDISNILQKQHNLLKLIIEKMEIVSEADEQDDPDLFSYG
NVKRQHLLNKKSKWDSVIKAVHAKKE
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcgaaaaggaaatgcagaattcctatgaatgtgtcattaatgaagatgactct
actcaagttacaccagatatatttaagataatactgagtggagatgcatccagcctgcaa
aacctgattcgtagagacccctcctgcctcagcagcgtggatgcctccagttcaagacct
attcactatgccgcttcaagtggtcaaatacaaatgattcatctgattgtaaatgtaaca
ggccttgcagaaataaatgcaaacgatgaaaaggggaatactcctctacactcagctgtg
gaaaaggatcagtttgagagctgcaaaaccttattagaattaggtgccgacccaaacatt
ctgaattctctcttgatgtcaccattgcatatggctatcagccttagacacaaccaaatt
attcagcttttagtgtcccaaaacaatactgatttgaatcttgaaggagatcttgggaac
tcaccagtgatgttagcttgctctattgacaatcatgacgcattaagcactttgctactg
tatggtgcgcgcctatgcagtcagaataagttgggacactttgctgttcacgcagcagct
tttgcgggatcaaaaaaatgtttggaaatagttcttaaaaaaggtgaagaactaggctat
tcatttgaacatcacttgaatttcactgacaagtcctgtagtagcccacttcacttagct
gttcatggtgggaatattgaagtaataaagttttgtatagacaatggagcaaaagtcgat
ttgcaacagaatgataaatctacagctcttcattttgcatgttctcaaggagctattgat
gttgtcaagctgatgctttcttcatgcaaacaggaagataatgtgatcaatataattgat
ggcggccatcagacaccattgcataaggcggtgatatttgatcacattgagctggttcag
tatttagtatcaaagggagcaggaattgacaatattgattgtgaatgtcacacgccacta
ctccttgcaacatcctgtggagcctggaagagtgttgaatttttagttttaaaaggagca
aacgttaaaaagaaagattctgctgggtgcaacttccttcatttggccattcaacagccc
aaaggactaaagaatctttcagattcaatattacaacgcaaggaagtcatggctctacta
gatgacaaggacaatgaagggtgcagtcccctccactatgcctgcaaacttggtgtccct
gattctgtaaacaacatgctggggttaaaagtgtcaatcagcctaaaatcaaaagataaa
aaatcccctttgcattttgcagctgcgtttggaagaattaatacttgtcaacgcttatta
gaaagaatgaaggacactagacttctaaatgaaggggatgaaaaaggaatgactcctctt
catttggcagctcagaatggacacaccagagttgttgaaatactccttagaaagggtgcc
ttatttctttgtgatcataaaggctggacttgcttccattatgctgcagaggaagggtat
actcaaactatgaagatacttttggaaacaaatatcaaattaatggataaagcagatgaa
gatgggaacacagctcttcatttagcggcacgagaaggacatgctgctgctgtggcttta
ttgctgaacaaaggtgctgaaataaatttaaacaaaagtgaaggttccttccttcatgaa
gcaatatataggggaagaaaagaagtagcgtttgttgctattggaagtgaaagaagccat
gaaactcttaccacttataagcctggctctgtgaagaaggttcctgtgctagacatgatc
gaacacctgccagaagctgctaaaatgcttttggataaagctatacaggaatcagatgat
gatgtcaacagtgaaaactaccatattaattataattttaagtacctacagtgcccattg
tcttataaaaaacttgcagaagaagataaaaaatacacatatcatcctcttgctgcaatg
aatacaatggtccgattcaaacgtgtagatctattgacccaccctgtctgtaaaaaatat
ttgcaaatgaaatgggttgcctatggtttaaaagcacacgttcttaatctggtcatatac
acatttggcctcctgcctcttactacacttattgtaaaaatgcgcccaaaaacaaacttc
actactgaagataacttaagagtgaataatgacctaaaagataaggaaaactacttgctg
actgtctgtatgattttagttttgatcatgagtttatatgctgttggaaaggaaattgtg
caaatatttcagcagcgttgcagatatttttttgactattctaatggactggactgggct
gctgctattacttctttactgtttgttcttcccatgcttttcaatgtcaaggatacgtgg
cactggcaatttggggctgttgcaatttttatatcctggctaaattacctgctgtatatg
caaaggtttgaaaattttgggatttatgtagtcatgtttggagaaatactccgcactctt
attcgaattgttttagtgttcttctttctaatactcgcatttgcactctccttttatgct
ttaatgattgaacagagaaattacagaaccataccagtctctgtaatgcagacatttgct
atgatgctgggtgaaataagctaccaagacaatttcttagtgccattcctaaatggtaga
atggcttttccaccacttacatttattgctttagtttggtttcttcttttggtcccaatt
cttctgatgaacttgctgattggtttggccgttggagatattgcagaggttcagagaaat
gcttgtttgaaaagaattgctatgcaggttgacctacatacaagtcttgaggaaaagctg
ccttactggtttatgcgccgagtggaccaagacattgtcacagtctatcccaacaaagtt
tgtggttcaaagatgccatttttcttcaatttaaatgcagcgtcagatttgctgcctaaa
ctagaatcaggagattgtgcaagccctatagaatttgaattgaaaaagcagaagttcaga
ctgaaagacatctcaaacattttacaaaaacagcataatcttctaaaacttatcattgag
aaaatggaaattgtgtctgaagcagatgaacaagatgatcccgaccttttcagttatggt
aatgtgaagaggcagcatttactcaacaagaagagcaaatgggatagtgtaataaaagct
gtacatgccaaaaaagaataa
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