Polypterus senegalus (gray bichir): 120530293
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Entry
120530293 CDS
T08668
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04136
Autophagy - other
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120530293 (atg13)
04136 Autophagy - other
120530293 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120530293 (atg13)
03029 Mitochondrial biogenesis [BR:
psex03029
]
120530293 (atg13)
Membrane trafficking [BR:
psex04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120530293 (atg13)
Atg1 complex
120530293 (atg13)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120530293 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120530293
NCBI-ProteinID:
XP_039610601
LinkDB
All DBs
Position
1:complement(102216120..102235472)
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AA seq
546 aa
AA seq
DB search
MEADLNLQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALSGQLPGIGRSMCVEVSLKTSEGDSMELETWCLEVNEKCDRDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLAVLGEGFQTVRVGVVGTPI
GTITLSCAYRTNLAFMSTRQFERGAPIMGIIVDHFVDRPFVTVGPMHPCTYRTPAGDEVL
EYPGVEDSQEVCTTSFSTSPPSQCVFSVTKTQLQNPKPAVMDTLKVPMMGLAFSHQLCSS
RLSYQPPTLGSTDLLCPAVLNATHLHQIVNQGKDGGVPLGPVQLPHGTPADHGKISTCNT
ADTTQHVPATPSSSGEETEAMTRSNDTKSSSPTDALEATFIRKVGALVNKPTTQVTTASL
DLPFAAFAPKKFDLEENDIMLHPNDSPPPASPLQGSLHSDGSSGSSGQTQDDFVMVDFKP
AFSKDDLLPMDLGTFYREFQNPPQLSSLSVDVSAQSMAEDLDSLPEKLALYEKNIDEFDA
FVDTLQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctaaatctgcaggataggaaggacctggacaaatttatcaagtttttt
gctctaaagactgtacaggtcattgttcaggctcgacttggagagaagatttgtaccagg
tcatcttcctcccccacaggatcagactggttcaatttagcaataaaagatatcccagaa
gtgacccatgaagccaaaaaagcgctgtctggtcagctgcctggcattggaaggtcaatg
tgtgtggaagtctctcttaaaacttcagagggtgattccatggaactggaaacatggtgt
ttggaggtgaatgagaagtgtgacagagatatcaaagtgtcatacacagtgtacaacagg
ctatctttacttctcaagtctttgcttgccattacccgagttacccctgcatacaagctg
tcaagaaagcagggacatgactatgttattctttacaggatttactttggagaagtacag
ctagcagtgcttggtgagggtttccaaactgtacgggttggagtagttgggacaccaatt
gggaccatcaccttgtcctgtgcatatagaactaatcttgccttcatgtcaaccaggcaa
tttgagcgtggtgcaccaatcatgggaattattgttgatcactttgtagaccggcccttt
gtcactgtaggaccaatgcacccctgtacctacaggaccccagcaggagatgaagtcctg
gagtatcctggtgttgaggactcacaggaagtgtgtacaacatcattctctacctctcct
ccatcacagtgtgtgttctctgttactaagacacagttacagaaccccaaacctgctgtg
atggacactctgaaggtccccatgatggggttggctttttcacaccaactgtgtagctct
cgtctctcctatcagcccccaacacttggatcaacggaccttttatgtcctgccgtgtta
aatgccactcatctacaccagattgtgaatcaaggcaaagatggtggagttccacttggt
cctgtgcaactaccccatggtacacctgctgaccacggaaaaatctcaacatgcaatact
gctgatacgactcaacatgtaccagcaacaccctccagcagtggtgaagaaacagaagca
atgactcggagcaatgacacaaagagcagctctcccactgatgccttagaagcaaccttc
ataagaaaagtaggggcacttgtcaacaaacctaccactcaggtcactacagccagtttg
gaccttccctttgctgcatttgcaccaaagaaatttgacttggaggagaatgacatcatg
ctccaccccaatgattctccacctccagcgtccccacttcagggcagcttgcactcggat
ggctccagtggcagcagcggccagacacaagatgactttgtaatggtggactttaaacct
gccttctccaaggatgacctccttcccatggatctaggtaccttttatcgcgagttccag
aatccacctcagctgagcagcttgtctgtggatgtgagtgcacagtcaatggcagaagat
ttggattctttaccagagaagctggctctatatgagaagaatattgatgagtttgatgct
tttgtagacacccttcaatag
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