Polypterus senegalus (gray bichir): 120530303
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Entry
120530303 CDS
T08668
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120530303 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120530303 (taf4b)
03036 Chromosome and associated proteins [BR:
psex03036
]
120530303 (taf4b)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120530303 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
120530303 (taf4b)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120530303 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
120530303
NCBI-ProteinID:
XP_039610620
LinkDB
All DBs
Position
5:complement(60581851..60926302)
Genome browser
AA seq
759 aa
AA seq
DB search
MLNMSACSANPIYIENANSTSTTESNQQRDGEVGTARGDAQPPEFKERDPGKEKSESGAL
DNPQPVSIGSELEGRISDASSCLPSIETPPAVSMANSQLLNVPSTSVTSIKNTHLLSASK
AGTSTPTLSLASVLLPAASTAPATRMGTVTQTPGRNPVITVPRFATSVQNGTPRPTQTTT
IQLPANFQIPQGMVLIRSDNGQLMLVSQQALAQAQAQGVGLIRPAVATSTPIIRTPAPQA
TGASIVRKPVPSTAVKTNFLHSCPVTPAQRLSQEKQVLGTTVSAVTSSTIKTVTVAGTPS
ENCTTKLQRHSPPITEGAKAAMAVQGALSSEVLENVKKCKNFLITLVKLASSGTHSVEMA
KNVKELVQNLLDGKLEAEEFTNRLYTELKSSPQPYLVPFLKRSLPAVRQLTPDSQLFIQQ
CVLQTPQSAIASSASILITQQNTKPVMINSRILQPSCSLSTTVKQSQPEKPVSLVIQQQK
GNVIKSTVATTIPQITTQSVNKVPPATQTCLHATGTVVKQTYLPPPKLVKVQLKNSFREN
LGSTFRDEDDINDVASMAGVNLNEENARILATNSELVGSVIRSCRDEPFLQTPTLQKKIL
ELGMRHGIIEVNPDVLNLVSHATLERLRELVEKLTVIAQHRALSYKDDDRYKLQNETRSQ
LKFLEQLDRLEKQRKDEEEREMLLRAAKSRSNKEDPEQLRLKQKAKEMQQLELAQIQQRD
ANITALAAIGPRKSDHLSLYPMVVLQRLAVEFPPVFLSQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacatgagcgcttgttcagcaaacccaatttatatcgaaaacgccaattcgact
tctacaacagagagcaaccaacagcgggacggagaagttgggactgcacgcggtgatgcg
caacctcccgagttcaaagagcgggatcctggaaaagagaagtctgaaagtggagccctt
gacaatccacagcccgtatcgataggttcagaactagaaggtcgtatttcggatgcgtct
tcatgtctgccctccatcgaaacaccgcctgcggtttcaatggccaacagtcagcttcta
aatgtccccagtacctctgtcacaagtatcaagaacacccacctcctttctgccagtaaa
gcagggacgagtacgccgaccctcagccttgcgtctgttttgctacctgccgcttctacg
gcgccagccaccagaatgggcacggtcactcagactcctggtagaaatccagtcataact
gttcccagatttgcaacatccgtacagaacgggacgcccagacccacacagaccacgact
atacaactgcctgcgaattttcagatcccacaaggaatggttctcatcagaagtgacaat
ggacagctgatgttggtatcgcagcaagcattagctcaagcacaggctcagggtgtggga
cttataagacctgcagttgctaccagcacccctataatcagaacacctgcaccacaggct
actggagcttcaattgtcagaaagccagttccttcaacagctgtaaaaaccaattttctc
cacagttgtccagttactccagctcaaagattgtcacaagaaaagcaggtattgggaact
accgtttcagctgttacctcatcaacaataaaaactgtgactgttgctggaacaccatct
gaaaactgcaccactaaacttcagaggcactctccaccaataacagagggagctaaagca
gcaatggccgtacagggtgcactttcttctgaggttttggaaaatgtaaagaagtgcaag
aatttccttatcacactagttaaactcgcgtccagtggaacacattctgttgaaatggca
aaaaatgttaaggagctggtacagaatttgctggatggaaaattggaagcagaggaattt
acaaaccgattgtacactgaactaaagtcctctccgcagccctaccttgtgcctttttta
aagagaagcttaccagcagttcgccagctaactccagattcacagctcttcattcagcaa
tgtgtactgcagacacctcagtcagcaattgcttcttcagcatcaattctcataacccaa
caaaatactaagccagttatgatcaatagcagaatcttgcagcctagctgttccctttcc
actactgtgaaacagtcacagcctgaaaagccagtcagtttggttattcagcagcagaaa
ggaaatgttataaaatccactgttgcaactactatccctcagataactacacaatctgtg
aacaaagttccacctgcaacacagacatgtctccatgcaacaggtactgttgtcaaacag
acataccttcctcctcctaagcttgtcaaagtgcagcttaagaacagctttagggagaat
cttgggagcacattcagagatgaagatgacatcaatgatgtggcttctatggcaggagtg
aacctaaatgaggagaatgctcgcatcttggcaacaaattctgaacttgtgggctcagta
ataagatcttgtagagatgaaccattccttcaaacaccaaccttgcaaaagaaaatattg
gaactgggtatgagacatggaattatagaagtaaatccggatgtcctaaatcttgtgtct
catgctactcttgaacgcttgcgggaacttgtggaaaaactcacagtaattgcacaacat
cgtgcactatcatacaaggatgatgatcgatataaactgcaaaatgaaactcgatctcag
ttaaaattcttggaacagttggatcgtttagaaaaacaaagaaaagatgaggaggagaga
gagatgcttttgcgtgctgcaaagagccgctccaataaagaagatccagagcaactgaga
ttgaaacagaaagctaaagagatgcagcagctggaattggcacagatacagcagagagat
gcaaatataacggcacttgcagctattggacctagaaagagcgaccatttgagtctttat
cctatggttgtactacagaggctggcagtggaattccccccagtgtttctcagtcagtaa
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