Polypterus senegalus (gray bichir): 120530360
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Entry
120530360 CDS
T08668
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120530360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120530360
03036 Chromosome and associated proteins [BR:
psex03036
]
120530360
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
120530360
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
120530360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
Glyco_hydro_2_N
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
120530360
NCBI-ProteinID:
XP_039610738
LinkDB
All DBs
Position
5:73001623..73480447
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AA seq
625 aa
AA seq
DB search
MWSWDQYLHEEKAEAVAAKLFTEYQTFPTNKNGFKVGMRLEGVDPLHPSMFCVLSVAEIL
GYRIRLHFDDYSDCYDFWVNADSFGIRPVGWCEKTGHKLHGPKGYKENEFEWSTYLQACN
SPSAPKNLFKNHINSILSSDIQVGMKLEAVDRKNPSLICVASVADIVDDYLLVHFDNWDD
TYDYWCDLSSPHIHPVGWCQKNGRPLTAPQGHPRPERFLWEEYLQETNTLAVPGSVFKQK
KRHGFTSKLKLEAVDKRNPMLIRVATIVDVDDYRIKIHFDGWSSKYDYWVDSDTPDIHPA
GWCQRTGHPLEPPLRPPDLKSHANQGMCPTPGCKGVGHIKGSRFTGHHSAFGCPYSEINM
KKEATLQDRLGGEKQITLVPVHFVSKTKRQFSDDTDQKAKESDAFKNCQESKYNGSSRLR
ARHSAPQHLPSCAMEEDDQSSINTRDLRSQGNKLLTPPVKKSKLQRGLAQSEKYLKTKDE
EDDIDLHSLLRDCNVDSMQQALHQSVFLSAMSTHPGRDLPLCWEQHCKLLPGVAGVEASR
VAQWTVDEVASFVHSLPGCEEQAKLFKEEQIDGKAFLLLTQADIVKIMSVKLGPALKIYN
SILMFKNAEDVLKREAQPGNEEPGM
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtggagctgggaccaatacttgcatgaagagaaagctgaagctgtggcagccaagctg
ttcacagagtatcaaactttccccacaaataaaaatggattcaaagtggggatgagattg
gaaggagttgacccccttcacccatctatgttttgtgtgctctcagttgcagagattctt
ggctatcgcattagacttcattttgatgattactcagactgttatgatttttgggttaat
gctgattcatttggtattcgcccagtagggtggtgtgagaaaactggacacaagcttcat
ggtcctaaaggttataaggaaaatgagtttgagtggtcaacttatttgcaggcttgtaat
tctccttcagcaccaaagaatcttttcaagaaccacattaattcaattttgtcaagtgac
atccaagtaggcatgaagttagaagctgttgaccggaaaaatccatcactgatatgtgtt
gcatcagttgcagacattgtagatgattacttactagtgcactttgacaactgggatgac
acatatgattactggtgtgatcttagcagtccacatatccacccagtaggctggtgtcag
aaaaatggaagacctcttactgcacctcagggccatcctaggccagagcgttttttatgg
gaagaatatttacaagaaacaaatacattagcagttcctggcagtgtgtttaaacagaaa
aaacgtcatgggttcacgtctaaactgaagctagaggctgtggataagcgtaatcccatg
ctaatacgtgttgccaccatagtggatgttgatgattatagaataaagattcactttgat
ggctggagttccaagtatgattattgggttgactcagacactcctgacattcatccagct
ggctggtgccaaaggactggtcacccattagaaccacctcttcggcctccagatttaaaa
tctcatgcaaaccagggtatgtgtccaacgcctggctgtaaaggagtcgggcacattaaa
ggctcacgatttactggacatcacagtgcctttggctgtccttactctgagattaacatg
aaaaaagaagcaactcttcaggatcgtcttgggggagagaaacaaattaccctggtccct
gttcattttgtatcaaaaacgaaacgccagttcagtgatgacacagatcaaaaggcaaag
gaatctgatgcatttaaaaactgtcaagagtccaagtacaatggatccagtcgtttaaga
gcaaggcactctgctcctcaacatctcccaagctgtgccatggaagaagacgaccagtcc
tcaattaatacaagggatcttcgatcacaaggaaataaactgttgactccaccagtgaaa
aagtcaaagctacaaagaggacttgctcagtcggagaagtacctgaaaacaaaagatgaa
gaagatgatattgacttgcacagtctgctcagagactgcaatgtagacagcatgcagcaa
gctctccaccaatctgtcttcttgtcagccatgtctacccacccaggtcgtgacctcccc
ctttgctgggagcaacactgcaagctcctgcctggagtagctggagttgaagctagtcgg
gttgcacagtggactgttgatgaggtggcaagctttgtacactcactccctggttgtgaa
gaacaagcgaagctgttcaaagaagagcaaattgatgggaaagcattccttctgctcact
caagcggacattgtgaaaatcatgagtgtcaaactgggtccggctctgaagatctataac
tccatcctgatgtttaaaaatgccgaagacgttttaaaaagagaggcacagccaggaaat
gaagagcctggcatgtga
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