Polypterus senegalus (gray bichir): 120530385
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Entry
120530385 CDS
T08668
Symbol
ambra1a
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1a
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120530385 (ambra1a)
04137 Mitophagy - animal
120530385 (ambra1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120530385 (ambra1a)
03029 Mitochondrial biogenesis [BR:
psex03029
]
120530385 (ambra1a)
Membrane trafficking [BR:
psex04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
120530385 (ambra1a)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
120530385 (ambra1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
120530385
NCBI-ProteinID:
XP_039610797
LinkDB
All DBs
Position
1:complement(102738144..102864165)
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AA seq
1302 aa
AA seq
DB search
MKVNHQKNSVRILSGRERGAQGFGSHRLLQQLVEDKTRWMKWESRKVELPDCPRSTFLLA
FSPDRALLASTHVNHNIYITEVKTGKCIHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEV
RIWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNEIHFWDWSRREPFAVVKTASDM
ERVRLVRFDPLGHSLLTAIVNPSNQQNEDDSEIPMESVEIPHYRQRSFLPSQPVRRTPLL
HNFLHMLSSRSSATQAGEQNQNDDGPTPVDLPVSDSGRYTSSVRNLPPHQGCVQHLGMVC
FCSHCSVVRPSSSSPLPNEEVPSSASADLPAASTFSSARTEPRQDQRNSDRPSAFSSVHS
SSAGNTLRNLSTAPGRRGLTGLMTSPPLVHQQLNTDTSSRLAGTDWTGSMLNIRTESVPP
PRTSASSVSLLSVLRQQEGSSQSPVYTSATEARGFQGPSSSGPTAHGSQHPLGEVNQCGQ
VPMHNVLQCNLSRYFIEYDHMQHIDHSTSSESSQSQQTQELLNNNIDPDRPGPSHYQPPH
SSDNNSGMIRGHLNRCRACHNLLTFNPDTQRWERTGQEPPSTAEENTSLQAPNQAFESLM
GQGQSADRRSFEGNVGVTGGESNFSRQGPTNLQAEQTVGLVYNQETGQWERVFGQSATGR
SGNVTQEALNQEMPEESSDEDSLRRRLLESSLMSFSRHDIPGSRDHPIYPDPARLSPAAY
YAQRMIQYLSRRDNIRQRSLRYQQNRLRPSSESPASNTNNQSVENNEVDFEEFEDNGDRT
RHRIPRNARMTAPSLGRFAPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGD
GQSAVASNIANTTYRLQWWDFTKFDLPEISNAFINVLVPNCKIYNDASCDISADGQLLAV
FIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRIL
LQPTTEHMVAQVFRLHQPHGGETSMRRVFNVLYPMPADQRRHVSINSARWLPEPGLGLAY
GTNKGDLVICRPVASNSGAEYFWDQLNEAIFTVNNNSSNRTTERPGTSRTSWRDRDMGLM
NAIGLQPRHPAPSVTSQGTQTPILQLQNAETQTDRELAAPSTSRATEEEGSEFSSGEDAL
SRIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRGSQTGTDSAGARPTGDSS
PPPTPAPSGDPGSSRCRVLSHTLSLTSQPGEPQNVLPEPSEQPPPLQFAAAFSSEGAGPS
GAGGGHPTDMDDVFENNRTESETVDSSTLSSSSSYLGDPYSR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaccaccagaaaaactctgtgcggatcctctctggaagggagcgtggtgct
caagggtttgggtcacatcgcctcctgcagcagcttgtggaggataaaacccgctggatg
aaatgggaaagccgaaaagtggagctcccagactgccctcgatcgaccttccttctggca
tttagccctgacagagccctgctagcatccacacatgtcaatcataacatctacatcact
gaagttaagactggcaagtgcatccactccttggtaggccatcgacgcacaccctggtgt
gtgaccttccatcccacgattccaggtcttgtggcatctggatgtctggatggggaagtt
cgcatctgggatttgcatggaggcagtgagagctggttcactgaaagcaatgtggctatt
gcatcattggccttccatcccactgcacagctgcttttgattgcaacaaacaatgaaatt
catttctgggactggagtcgcagagagccttttgcagtggtgaaaactgcaagtgacatg
gagcgtgtgaggttggtaaggtttgatccacttggacatagtctgcttacagccattgtc
aacccttccaaccagcagaatgaagatgattcagagattcctatggagagtgtggagata
ccccactatcgccagcgttcctttctgccctctcagccagtgcgtcgtactcctctcttg
cacaattttctgcacatgctgtcttcaagaagctcagcaactcaggcaggggaacagaac
caaaatgatgatgggcccactcctgtggatctgcctgtttcagatagtggccgttatact
tcttctgttaggaacctgcccccacaccaaggctgtgtgcagcaccttggcatggtctgt
ttctgtagccactgctcagtggtacgtccatcgtcttcctctcctcttccgaatgaggag
gttccttcctcagcttctgcagacctccctgctgcctccactttctcctctgctcggaca
gaacctcgacaagatcagcgaaacagtgataggccttcagcttttagcagtgtgcatagc
agctctgctggtaacactttaaggaacctttctactgcacctggccgtagggggcttact
ggacttatgacaagcccacctttagtgcaccagcaattgaacacagacacttctagtcgg
cttgcaggtactgattggacaggaagcatgctgaacattcgcacagaatcagtacctcca
cctagaactagtgcctcttcagtcagcctgctgtctgttttgaggcagcaggagggcagt
tctcagtctcctgtgtacacgtctgcaacagaagctcggggatttcagggtcccagcagt
agtggccctacagctcatggcagccagcatcctctgggagaggtcaatcagtgtggtcag
gtgcccatgcataatgttctccagtgtaacctgagccgctatttcattgagtatgatcac
atgcagcacattgatcatagtacaagtagtgaatctagccagtcccagcaaacccaggag
cttcttaacaataatatagatcctgatcgaccaggtccttctcactatcagcctcctcac
agtagtgacaataactctggcatgattagggggcatttgaaccgctgcagggcctgccat
aacttgcttactttcaacccagatacacaacggtgggaaaggactggccaggagccccct
tctactgctgaagagaacacttcacttcaagcacctaatcaagcatttgagagtttaatg
ggacagggacaatctgctgataggagaagctttgaaggaaatgttggagtcactggggga
gaaagcaacttctctagacagggccctaccaatctgcaggcagaacagactgttgggcta
gtttataatcaagaaactgggcagtgggaacgtgtatttgggcagtcggccacaggccgt
agtggaaatgtaacacaagaggccttaaaccaagaaatgcctgaagaaagctccgatgaa
gattctttgaggaggaggttgttagagtcttcactcatgtctttctctcgacatgacata
cccggatcccgtgaccaccccatttatcctgaccctgcgagactctctcctgctgcctat
tatgcccaacgaatgatccagtacctatcgcgacgtgacaacattcgccaacgctcccta
cgctaccagcagaacaggctgcggccatcttctgagagtcctgccagtaacactaataat
cagtctgtggaaaacaatgaagtggactttgaggaatttgaggacaatggggatcgaacc
agacacagaataccccgcaatgccaggatgactgctccttcactggggcggtttgcccct
cggcgtttccttttaccagagtacctgccatatgctggtattttccatgaaagaggtcag
cctggtttagcaacgcactcatcagtgaatagagtccttgcaggtgctgtaataggagat
gggcaatctgctgtggccagtaacattgccaatacgacctaccgcctgcagtggtgggac
tttacaaagtttgacttgccagaaatcagtaatgcctttatcaacgttttggttccaaac
tgtaagatttacaacgacgcaagctgtgacatctctgctgatgggcagctcctggctgtt
tttattcctagcagccaaaggggtttcccagatgaaggcatcttggctgtgtattcactg
gcaccacacaatctgggagaaatgctgtacaccaagagattcggtcccaatgcaatttct
gttagtttgtctcccatgggccgctatgtgatggtgggactggcatctcgtaggatcctt
ttgcagccgaccacagagcacatggttgcccaggtgttccggttacatcagccacatggt
ggagagacttcaatgaggagagtgttcaacgttctttaccccatgccagcagaccaaaga
aggcatgttagcatcaactctgctcgatggctgccagagccaggtttgggcttggcttat
ggaaccaacaagggagatcttgtgatatgccggccagtagcatcaaattctggggctgag
tacttctgggatcagctgaatgaagcaattttcacagtaaataacaatagctcgaaccgc
accacagagagaccaggtaccagtcgtacttcttggagggacagagacatgggtctgatg
aatgctattggtcttcagccacgacatcctgcgccttcagtaacctcgcagggtactcag
acacccattttacagcttcagaatgcggagacacagacagatcgggagcttgcagcaccg
agcacttcacgagctacagaagaggagggctcagaattcagttcaggagaagatgcacta
tcccgaatccgtcgcctgattgcagaaggtggcatgacagcagttgtgcagagggagcag
agcaccactatggcatccatgggaggttttggcaacaacatcatcgtgagtcacaggatt
catcgcggctcacaaactggaactgattcagcaggagctaggccaacgggagattcgtct
ccacctcccacccctgcaccttctggtgatcctggcagtagccgatgcagagtcctttct
cataccttatcattgactagtcagcctggggaacctcagaatgtccttcctgaacctagc
gagcaaccgcctcctttgcaattcgctgctgctttctcttctgagggagcaggtccctct
ggtgctgggggagggcatcccacggacatggatgatgtttttgagaacaaccgcacagag
agtgagaccgttgactcctcgactctcagtagcagcagcagctatttaggggacccatac
agtcggtaa
DBGET
integrated database retrieval system
