Polypterus senegalus (gray bichir): 120530686
Help
Entry
120530686 CDS
T08668
Symbol
sgpl1
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00600
Sphingolipid metabolism
psex01100
Metabolic pathways
Module
psex_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120530686 (sgpl1)
Enzymes [BR:
psex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
120530686 (sgpl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
Aminotran_1_2
SepSecS
BLH_phosphatase
Motif
Other DBs
NCBI-GeneID:
120530686
NCBI-ProteinID:
XP_039611043
LinkDB
All DBs
Position
1:104155794..104225986
Genome browser
AA seq
571 aa
AA seq
DB search
MSQEKVEVDISNAVAIYVEFFMHYVDKGRRFVNNQCTGLEPWQIIGATVMSTLFILWLHG
FLFQQESLRSRAKKQFFKMIRRVPFIGTAIQKQLNKALHDMATNLFTLKEGMSYITDLPS
KGLSQQEVLQKLNEYTSLAEVQWQSGKVSGTVYSGDEKLTNLLVKVYGDFAWSNPLHPDI
FPGVRKMEAEIVRMACTLFHGSPDSCGSVTSGGTESILMACKAYRDIAVERGVRFPEIVA
PVSAHAAFNKAAHYFGMKMVHVPLDKNTMQVDVKMMKRAISKNTAMLVCSVPQFPHGAID
PVQDIAKLAVKYKIPLHVDACLGGFLIVFMEKANYPLPPFDFRVKGVTSISADTHKYGYA
PKGSSVILYSDKKIRHYQFFVAADWQGGIYASPTIAGSRPGGIIAACWATMMHMGENGYI
EATKKIIKTARYIDTELRKINGIFVFGKPEVSVVAVGSNVFDIFRLSNLLTSKGWNLNTL
QFPSSIHICVTLLHTHAGVAQQFIEDVKNSVSEIMKNPLEKTTGMGAIYGMAQSIPDRSL
VTEISCGFLDCLYSTDTICVDKHMNGSTGLQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagaaaaggttgaagttgatatttcgaatgctgtggctatttatgttgaattt
ttcatgcactatgttgacaagggtcgaagatttgtgaataaccaatgtactggccttgaa
ccatggcagattattggagcaactgtaatgtctacactttttatactctggttacatgga
tttctgtttcaacaagaaagtttaagatccagagctaagaagcagttctttaagatgata
aggagggttccttttattggtactgctatacagaagcagttaaacaaggctctgcatgac
atggcaacaaatctatttacgcttaaagaaggaatgagttatattacagatcttccttcc
aaaggactttcacagcaagaagtcttgcaaaagctcaatgaatatacatctttagcagag
gtacagtggcagagtggaaaagtttcaggtacagtttacagtggagatgagaagctcacc
aatttgttagtaaaggtgtatggagattttgcttggagcaatcctctccatcctgatatc
tttcctggagtacgaaagatggaagctgaaatagttcgaatggcttgtacactatttcat
ggtagtcctgattcttgtggctcggttacttcaggtggaacagaaagcatcctaatggcc
tgcaaggcatacagagacattgctgtagagcgtggagtcaggttccctgaaattgtggct
ccagtcagtgctcatgcagcatttaataaagctgctcattactttggaatgaaaatggtt
catgttcctttggacaaaaataccatgcaggtggatgtaaagatgatgaaacgagcaatc
tcaaaaaacaccgctatgctggtatgttctgttccccagtttccccatggagcaattgac
ccagttcaggatattgcaaagcttgctgtaaaatacaaaattccccttcatgtggatgcg
tgcctgggtggatttttaatagtgtttatggaaaaagcaaactaccccttgccacctttt
gattttcgagtcaagggtgtaacaagcatctcggccgacactcacaagtatggctatgca
ccaaaaggctcatcggtaatactctacagtgacaaaaaaattcggcactaccagtttttt
gtggcagcagactggcagggaggaatttatgcctctccaaccattgctggctcacggcct
gggggaatcattgctgcttgttgggccaccatgatgcacatgggagagaatggatatatt
gaagccacaaagaaaattattaagacagcaagatacatagacactgagttgagaaagatc
aatggaatatttgtttttggaaagcctgaagtttctgtggttgctgttggatctaatgtc
tttgatatctttcgtctatccaatttactcaccagcaagggatggaacttaaacacacta
cagttcccttcaagcattcacatatgtgtgacattattacacacacatgcaggagttgcc
cagcaatttatagaagatgttaagaactcagtaagtgagattatgaaaaatcctctggag
aaaacaactggaatgggtgcaatctatggaatggcacagtcaattcctgatcgttccttg
gtaacagaaatatcctgtggatttctggactgcctatatagtacagacacaatctgtgtg
gataagcacatgaatggctcaactggactccaatga
DBGET
integrated database retrieval system
