Polypterus senegalus (gray bichir): 120530732
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Entry
120530732 CDS
T08668
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120530732 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120530732 (clasp1a)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120530732 (clasp1a)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
120530732 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_DAAF5
MMS19_N
ParcG
Paxt-1_C
MMS19_C
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
120530732
NCBI-ProteinID:
XP_039611177
LinkDB
All DBs
Position
6:2188154..2505630
Genome browser
AA seq
1612 aa
AA seq
DB search
MEPNMEYCLAQVMQKDVGRRLQVGQELIDYFSDRQKSSDLEHDQTMLDRLVDGLATSWVN
SSNFKVALLGMDILSALISRLQDRFRTQIGTVLPSLIDRLGDAKDQVRDQDQTLLLKIMD
QAATPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNAYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRADLSKKGLPQSRLNVIFAKFDEVQKSGNMILSSASDK
TFDDEDSIDGNRPSSSSSSSSKAPPSGRKTGSAGTTRRPGSSVGTKSGGKEGAAAGAVDE
EDFIKAFDDVPAVQIYSYRELEDSMNKIREILSDDKHDWEQRVLALKKVRSLLIAGAADY
EGFLQQLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNRFDHGAETIMPTLLNLVP
NSAKVMATSGIAAIRLIIRRTHYPRLIPIMTSNCTSKSVAVRRRCYEFLDLLLQEWQTHS
LERHLSVLTETIKKGIHDADSEARSVARKCYWGFHGHFSREAEQLFHSLESSYQKALQSH
LKNSDSIVSLPQSDRSSSSSQESLNRPLSTKRSPTGSSVSRTSSVSSKSVTTPGSLQRSR
SDIDVNAAASAKSRMTAVPTATPFSSAAALPPGSYASLDGTSAKSEGRVRTRRQSSGSTV
GVSTTPADNRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLAQNYWKPQRVPVTAAST
TEKRSKIPRSQGCSRETSPNRLGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFAPL
ASRRHSRSTSALSSADSLGPSDRFGLSHQTRMSASVNAMRVLNTSTEVEAAVADALLLGD
SRNKRKPVRRRYESPGIYSDDDANSDASSACSERSCGSRNGGIPHYLRQTEDVAEVLNHC
ASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDF
VTIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIV
DQTQTPNLKVKVAILKYIESLAKQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKCAP
DGVSTLHNWVADELPARPSTVPSLPGEGNLEERCKQAAQVVLISLFELNTPEFTMLLGAL
PKTFQDGATKLLHNHLKNSSNSVGSPSNTLGRTPSRHAPSRTSPLTSPTNCSHGGLSPSR
FWGWSADGLSKHPPPPPQTHSIPAPPCHKALRRSYSPSMLDYDTENMNSDEIYSSLRGVT
EAIQSFSYRSQEDLNEPIRRDGKKDDGVGREGIIASPMADIRVGLDTVEGGRTALDNKTS
LLNTPAPRAFSGPRPREYNPYNYTDTINAYDKTALKEAVFDDDVEQFRDVPIDHSDLVAD
LLKELSNHNERVEERKAALLELLKITREDNLAVWDEHFKTILLLLLETLGDKDHSIRALA
LRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKV
LCPIIQTADYPINLAAIKMQTKVIERISKESLHQLLPDIIPGLLQGYDNTESSVRKASVF
CLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaatatggagtactgcttggcacaagtgatgcagaaagatgtggggcggagg
ctgcaagtgggccaggagttgatagactacttctcagaccgacagaagtcgtcagatttg
gaacatgatcagactatgttggataggttggtcgatggccttgccacctcttgggttaac
tccagcaactttaaggtggccttgttaggtatggacattttatctgccttaatctctaga
ctgcaggatcgctttaggactcagattggcacagtcctccctagtttaatagaccgttta
ggagatgcaaaggatcaagtccgtgaccaggatcaaactctgctgctgaaaatcatggac
caagctgctacaccccagtatgtctgggatcgaatgctaggaggattcaagcataagaat
aaccgaactcgagaaggtgtttgtctttgccttattgccacactaaatgcatatggagct
caaggtctaactctaagcaaaattgtgccacatatatgtaatttattaggtgatccaact
agtcaggttcgagatggagcaatgaattgtcttgtggaaatatacagacatgtgggggaa
cgagtgcgagcagaccttagtaaaaagggattgcctcagtccaggttgaatgtaattttt
gctaaatttgacgaggtccaaaaatctgggaacatgatactgtcatcagcctctgataaa
acgtttgatgatgaagactccattgatgggaacaggccgtcatcttccagctcttcatcc
tcgaaagcgccccctagtggaaggaaaacgggcagcgctggaacgacacgccgcccgggg
tcttcagttggcaccaagtcaggaggaaaagaaggagctgctgccggcgcagtcgacgaa
gaggacttcattaaggcctttgacgacgtgccagcggtgcagatctactcgtacagggag
ctcgaggactccatgaacaagatcagagaaatcctgtcagacgacaagcacgactgggag
cagagagtcctggcgctgaagaaagtgcgctctctgctgattgctggtgcggcagattat
gaaggcttcttacaacaactgcgacttttagatggggcttttaaattgtccgctaaagac
ctccggtcacaagtagttcgggaagcctgcatcactctagggcacctttcatcagtttta
gggaacagatttgaccatggtgcggaaacaatcatgccaactctccttaatcttgtccca
aatagtgccaaagtcatggccacgtctggcattgctgctatacggttgattatacgtcgc
acacattatccccgactaatcccaataatgaccagtaattgcacttcaaagtcagtggct
gttagaaggcgctgctatgaatttttagatttacttctgcaagaatggcagacgcactca
ttggagaggcacttgtctgttctgaccgaaacgatcaagaagggcatccatgatgcggat
tctgaagccagatctgtagccagaaaatgttactggggctttcatggccattttagtcga
gaggctgaacaacttttccattctttggaatcttcataccagaaggccttacagtcacat
ttaaaaaattcagacagcatcgtgtccctgccacaatcggaccgatcttcgtccagctca
caggaaagcctcaaccgtccattgtctacaaagagaagtccaactggaagcagtgtgtcc
agaacatcttcagtcagttccaagtcggtgacaactccagggtccctccagcggtcccga
agtgacattgacgtcaatgcagcagcaagtgccaagtcaagaatgacggcggttcccacg
gcgactcccttcagctctgcggctgccttgcctccgggctcgtacgcgtctctagatggt
acttccgctaaatcagagggacgagtgcgcaccagaagacaaagctcgggcagcactgtg
ggggtcagcacaactccggctgacaaccggggccgcagtcgagccaaagtggtgtcccag
tctcaacgatccagatctgctaatcctgccggtgctggcagccgctccagttcccctggc
aaattgctggcccagaattactggaagcctcagagggtgccagtgacagcagcgtctacc
accgagaaaagaagcaaaatccctcgcagccaagggtgcagcagggagacgagtcccaac
agacttggcctagcaaggagcagccgtatcccccggcccagcatgagtcaggggtgcagc
cgcgatacgagccgtgagagcagtcgagatacaagccctgcgaggggcttcgctccactg
gcctcccgacgccactccaggtccaccagcgctctctcgtcggccgattctctcggcccg
tcagatcgatttggtctttcacaccaaaccaggatgtctgcttctgtgaacgccatgagg
gtgctaaacaccagcacagaggtggaggcggcagtggcggatgcactgcttttaggagac
tccaggaataagagaaagcctgtccggagacgatatgaatcaccgggcatctattcagat
gatgacgcaaacagcgacgcgtctagcgcttgttcagagagatcttgtgggtctcgaaat
ggggggatacctcattacctgcggcagactgaagacgtagctgaggtcctaaatcactgt
gccagctccaactggtcggagaggaaggaaggcctcctaggcttacagaacctccttaaa
agccagcggatattaagccgcgtggagctaaaacggctttgtgagatcttcactcgaatg
tttgccgatcctcacagcaagagagtgttcagcatgttcttggagacgctggtcgacttc
gtcacgatccacaaggacgacttgcaagactggctctttgtcttactgactcagctcctg
aaaaagatgggggccgatttgctaggctcagttcaagcgaaggttcaaaaggcactggac
gtcaccagggattccttcccattcgaccagcagtttaacattctgatgagattcatcgtg
gaccagacgcagaccccaaacctaaaggttaaagtggcaatcttgaagtacatcgagtct
cttgctaagcagatggaccctgctgactttgtcaactccagtgaaacacggctggctgtt
tcccgaatcataacttggacaaccgaaccaaagagctcagacgtgagaaagtgcgcccca
gacggagtgtccaccctccacaactgggtggccgacgagttgccagcccggcccagtacc
gtcccctcactgcccggcgaaggaaacctggaggaaaggtgcaagcaggcggcccaggta
gtcctgatttctctgtttgagctgaacactcccgagttcaccatgctcctgggtgccttg
ccaaaaacgtttcaggatggggccaccaaacttctgcacaatcatctcaaaaactctagc
aacagtgtgggctcacccagcaataccctcggacggaccccttcccgacatgcccccagc
aggactagccccttgacttctcccaccaactgttcccatggggggctgtcaccaagtcgc
ttttggggttggagtgctgatgggctgtcaaagcacccgcccccccctcctcagactcac
tccatccccgccccgccctgccacaaggccttgaggcgctcttactctcccagcatgctt
gactatgacacggagaacatgaactctgacgagatctacagctcgctgcgcggcgtgaca
gaagccatccagagtttcagctaccgcagccaggaggatctcaacgagccgattcggcgg
gacggcaagaaagacgacggcgtgggcagggaaggcataatcgcttcccccatggcagac
attcgcgtcggcctggacacggtggaaggtggtaggacggccctggacaacaagacgtct
cttctgaacactccggcgccgcgcgccttctccggaccccgacctcgggagtacaaccct
tacaactacaccgacacaatcaacgcctacgacaagactgccctgaaggaggccgtgttt
gacgacgacgtggagcagtttcgtgacgtccccatagatcactcagacctggtggcggac
ctcctgaaggaactgtccaatcacaacgagcgagtggaggagaggaaagccgccctgttg
gagctcctgaagattacacgggaggacaacctggccgtctgggacgagcacttcaagacc
attctgttgttactgctggagacactgggagacaaggatcattccatcagagcgctggcc
ttgagggtccttaaagaaattctgaggaatcagccagcaagatttaaaaactatgcagaa
ctcacaatcatgaagaccctggaagcgcataaggattctcacaaggaggtcgtgagggcc
gcagaagaggctgcttccaccctggccagctccattcaccctgagcagtgcatcaaagtg
ttgtgtcccatcatccagacagcagactaccccattaacttggctgccattaaaatgcaa
acaaaggtcattgaacgcatttcaaaggagtcgctgcaccagctcctcccggatatcatc
cctggattgttgcagggctatgacaatacggagagcagcgttcgaaaggccagcgtgttt
tgcttggtggccatctattcagtaattggagaagagctcaagcctcaccttgcacaactt
acgggaagcaagatgaaacttttaaacttgtacatcaagcgcgcccagacgaccaacagc
aacagcagctcctcgtcagacgtctccacccacagttag
DBGET
integrated database retrieval system
