Polypterus senegalus (gray bichir): 120530880
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Entry
120530880 CDS
T08668
Symbol
casz1
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120530880 (casz1)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120530880 (casz1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
YddI
Motif
Other DBs
NCBI-GeneID:
120530880
NCBI-ProteinID:
XP_039611542
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All DBs
Position
6:complement(24543488..25144066)
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AA seq
1997 aa
AA seq
DB search
MPCLVARIPTGMHEAVMHRDLRCLADAERTLCTETTSGKSKMAAKRKGGLKLNAICAKLS
RQVVNDCASQQAEGDVLLQESTEREALLFEDLEKPESDFPDGLSHVQDREEDKRRREAIE
KWVNGEYSEDHAFEQQVKKSKKSGTADEGPPEGVYMVQPKGCSDDEDNEEDPEEGQGSQD
GSYHDDRDSEGPAQKEDSYNSSSEPTTRPLPFSSPGEASSLRDYAANTMNEFLGMFGYDD
QQVRDELAKKISFEKLKAATSESSSLSSEEVTRRARFSKYEEYIRKLKAGETLPWPVHAP
KSDDLNCKLGHDKGALLQIASRLQSPEGHILPAESKPVVLPVPPSSSSMQSLASRASKYD
FFIQKLKTGESLRPQNGNTYKRPSKYDLENVKYLHLFKPGEGNPDMGGAIAFKTGKVGRP
SKYDIRNIQKLMPVKTDASLIPQTLSATSSTPVTAGPATVAVSTTGPSATSEQSTNLNFS
NPDYMKSSFSKTDSITTGTVSTVKNGLPAEKTVTEDVNLYQKYIARFSGSQHCGHLHCAY
QYREHYHCLDPECNYQRFTSKQDVIRHYNMHKKRDNSLQHGFMRFSPLDDCSVYYHGCHL
NGKSTHYHCMQVGCNKVYTSTSDVMTHENFHKKNAQLINDGFQRFRATEDCGTVECQFYG
QKTTHFHCRRPGCTFTFKNKCDIEKHKSYHIKDDAYAKDGFKKFYKYEECKYEGCVYSKA
TNHFHCIRAGCGFTFTSTSQMTSHKRKHERRHIRSSGVLGLSSSFLVPKEEPDDSSNDDL
MDFSAISSKNSSLSASPTTQPSSSIPLMLPTPTTTMSSSQAVKPTASLSPASKMSTLLTQ
ALPSTMPVALTLSNPALSASNPFFPIIPRLPLQIPVSATGLICAASSNATSSSSSSNESI
PQSGSASGESTLAITSSSHAATSIVEKISASKGLISPMMARLAAAAFKPAGSVETGNGLQ
GSVARFNLVQVKQEPLDGSTATSQDSLQEKSLDLSKKEQSNESNGHPAPGNTSLLSSLMN
KISQANAGFFNTLNIKSEMENSHVGDGPEAAQFLGQAGKAPLQEKTAEFWKTYLRRFDTE
DFCEATCDFLHKCHFHCLVEDCGALFSTLDGAIKHANFHFRAAVKVKTEPLLNPTGENRV
PSDSSASQHPASAHSGELPTVSPAAIFTSAPSLLTWKQLTGSIPQLPASVPSLGAAASQL
ATTSLENAKPQVKPGFLQFQDNDPCLATDCKYANKFHFHCLFGNCKYVCKTSGKAESHCL
DHINPNNNLMNVRDQFAYYSLQCLCPNQQCEFRMRGHYHCLRPNCCFVTNITTKLPWHIK
KHEKAERRAANGFKYFTKREECGRLGCKYNQVNSHFHCIREGCQFSFLLKHQMTSHARKH
MRRMLGKNFDRVPSQVVTHSHRNDDLHPVANLSMSSVGSHSSLGPGFTSMMDETDDYMDY
MGCGSPTGASSESSNLDRSCSSTPVGNESSSAGLGCLVATTAAVADPSPADPTSTHNAPP
PPLLQPQPPSFPQALLRPPLSSLPYLLSPSCLSYSLLSTTLGAARSVAMPTATPGFSPIL
AAPSPVKSDVPIVQDAAGNTISMPTASGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMM
LEGFRRYDLYEDCKDAGCQFSLKVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLD
DFKRFKSSLSCNFADCQFSGNSTHFHCLRCEFRCTDSTKVTAHRKHHGKQDVINAAGFCQ
FSSSVDCEVLDCKYKLKCSHFHCTYPECKHTVVGMSQMDSHKRKHEKQERGELPSVSPGR
EVAVSTGVNARVPPASPGPADVPGSTANFPASSEYGNQGSISLDSSLNLGTDANSSLFFL
KNAVGIGLNDSLDLSKKVQNDLLVAVNSVPCGTTMQGSQDEATATSGEAEDDLSNEEEMN
AEDDDDDDEDDDDDDEEDDDEEDDGEEDDELNTDSYEDSVPEPESLASEKENGVCFDASS
NHTAASGLPKKDPAAEP
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtctagtagcgaggattcctacaggaatgcatgaagcggtgatgcacagggac
ctgcgctgccttgcagacgctgaaagaactttatgcactgaaacgacctcaggtaaatcc
aagatggctgctaagaggaaaggtggcctaaagctaaatgcaatttgtgccaagctaagc
cggcaagtagtgaatgactgtgcctcccagcaggcagagggggatgtcctcctgcaagag
agcaccgagagggaggccctgctctttgaagatcttgagaaacctgagtctgactttcca
gatgggcttagccatgtgcaggacagagaagaggataagcgtcgaagggaggccattgaa
aaatgggtaaacggggagtactctgaggatcacgccttcgagcaacaggtgaagaagagc
aaaaagagtggaactgctgatgaagggcctccagaaggagtttacatggtacaacccaaa
ggttgtagcgatgatgaggacaatgaggaggacccggaagagggtcagggctcacaggat
ggcagttaccatgatgacagggactccgaggggcctgctcaaaaggaggacagctacaat
tcttccagtgagcccacaacgagaccgttaccattttcttctccaggagaagcctcttct
ctccgtgactatgcagccaacaccatgaatgagttcttgggcatgtttggttatgatgac
cagcaggtgagagatgaactggccaagaagataagcttcgagaagctaaaagctgctacc
tcagagtcttcctccctttcaagtgaggaggttacccggcgggcccgcttctccaagtat
gaagaatacattcgcaagctaaaagctggtgagacattaccttggccagtccatgctccc
aaatccgatgacctgaactgcaagttggggcatgacaaaggggcattgcttcaaatagct
agccgattgcagagccctgagggtcacattctcccagctgaatcaaagcctgtggttctc
cctgtgccacccagctcctcatccatgcagagcctggcctcccgggcttccaaatacgac
ttttttattcagaagttaaaaacaggagaaagcttgcggccgcagaatggcaacacctac
aaacgaccatccaaatatgatttggaaaacgtcaagtacctccacctcttcaagcctggg
gaaggaaacccagacatggggggagccatcgccttcaaaactggaaaggtgggccggcct
tccaagtatgacatccgcaacatacagaaactgatgccagtgaagacggatgccagcctg
attccacagacattgtcagccacatccagcacacccgtgacagccggcccagctactgta
gccgttagcacaacaggtccctctgccacctctgagcagtccaccaacctgaacttcagc
aatcctgattatatgaaatcaagcttctccaagacagactccatcaccacagggacagtg
tccacagtcaagaatggattgccagcggaaaaaacagtcacagaagatgtcaacttatac
cagaaatatattgccaggttttctggcagtcagcactgtggccacctacattgcgcctat
caataccgagaacactaccactgcctggatcccgaatgcaactatcagagattcaccagt
aagcaggatgtcatccgacattacaacatgcacaagaagcgcgacaactcactgcaacac
gggtttatgcgcttcagccctctggatgactgcagcgtttactaccatggctgccacctc
aacggcaagagcacgcactaccactgcatgcaggttggctgtaacaaggtgtacaccagc
acttcagatgtgatgacgcacgaaaactttcacaagaagaacgcacagctcattaacgat
ggcttccagaggttccgagccacagaagactgtggaacagtagagtgccagttctatggg
cagaagacaacgcactttcactgcaggcgtccaggttgtacatttaccttcaaaaacaag
tgtgatatagagaagcacaagagctaccacatcaaggacgatgcgtatgccaaggatgga
ttcaagaagttctacaagtacgaggagtgcaaatatgaaggctgtgtgtatagcaaggca
accaaccacttccactgcattcgggcaggctgtggctttaccttcacgtccacaagtcaa
atgacctcccacaaacgaaagcacgaaagacgacacatccgctcatcgggggtccttggt
ctttcctcatccttccttgtgcccaaggaggaaccagacgattccagcaatgatgacctt
atggacttctcggctattagcagcaagaactctagcctcagtgcttcccccaccactcag
ccatcctctagcatccccctcatgcttccaacaccaactaccaccatgtcgtcctctcag
gcggtcaaacccactgctagtctctctccagccagcaagatgtcaacgcttttaacccaa
gctcttcctagtaccatgccagtcgctctcaccctctccaacccagccttatctgcttca
aatcccttttttcccatcattccccggcttccactacagattcctgtctctgctactggt
ttaatatgtgcagcttcctccaatgccacatcatcgtcatcatcatccaatgaatcgatc
cctcagagtggctcagcatctggcgaatctacattggcgatcacatccagctcacatgcg
gcaacttccatagtggagaagatttccgccagcaagggcctgatatcaccgatgatggcc
agacttgccgcagctgcgttcaagccagcagggagtgtagagacaggaaatgggctgcaa
gggagcgtggccaggtttaatctggttcaggtgaagcaggagcccttagatggaagcaca
gcaacctcccaggattctttgcaggagaaaagtttggatctcagcaaaaaagagcagagt
aatgaatcaaacggacaccctgcaccgggaaatacatctcttttatcctcgcttatgaat
aagatttcgcaggccaatgcgggattcttcaacacactgaacatcaagtcggagatggag
aacagccatgtgggcgacggccctgaagctgctcagtttttggggcaggcggggaaagct
ccgcttcaagagaagacagccgagttctggaagacctacttgaggaggtttgatacagaa
gatttctgcgaagcgacttgtgatttcctacacaaatgtcacttccattgcctcgtggag
gactgtggcgcccttttcagcacattggacggagccattaaacacgcaaacttccatttc
agagccgcagtcaaagtgaaaacagagccgttgctgaacccaactggcgagaacagggtg
ccatctgactcgagcgcctcacagcatcctgcttcagctcacagtggagagctgcctaca
gttagccctgctgccatctttacttctgctccatcgttgctcacgtggaaacaactgact
ggctccattcctcaacttcctgcctccgtaccaagcctgggggctgctgcctcccaacta
gcgaccacctcgttggagaacgccaaaccccaagtgaaaccgggatttctccagttccag
gacaatgacccctgcttggccacagactgcaaatatgcaaacaaatttcacttccattgt
ctttttggaaactgcaaatacgtgtgcaagacgtcaggcaaggctgaatcccactgcctg
gatcacatcaaccccaacaacaacctgatgaatgtccgcgaccagtttgcttactactcc
ctgcagtgtctttgccccaaccagcaatgtgagttccgaatgcgtggacactaccactgt
ctgcggcctaactgctgctttgtcacgaacatcacaaccaagctaccctggcacattaag
aagcatgagaaggcagagcgccgagctgctaatggattcaaatacttcacaaagcgggaa
gagtgtggccgactaggctgcaagtacaaccaggtgaacagccacttccactgcatccgc
gagggctgccagttctccttcctgcttaaacaccagatgacctctcacgcccgcaagcac
atgaggaggatgcttggcaagaattttgaccgggtcccctcacaggtggtaacgcactct
cacagaaatgacgacttacacccagtggcaaatttgtccatgagctcagttggaagccac
agtagcttgggccctggttttacaagcatgatggatgaaacagatgactacatggactac
atgggctgtggcagtccaacaggggcctcgtcagagtcctcaaacctggatcgcagttgc
agtagcactccagtgggcaatgagagctcctcggcaggattaggctgcctggttgctact
actgctgctgttgctgatccttctcctgctgatcctactagtacccacaatgcaccacca
ccgccactgctgcaacctcagcctccatctttcccgcaagccctgctccggcctcctctc
tcatcccttccatacctcctctctccatcttgtctgtcatattctctactcagcacaact
ctcggagcagcaaggagcgttgccatgccgactgccacgccgggtttcagcccaatcctt
gccgctccgtctccagttaaaagtgacgtccccatagtacaggatgctgcagggaacacc
atttctatgcctacagcctctggtgcaaagaaacgcttttggatcatcgaagacatgtca
ccatttggcaagaggcgcaagacagcttcatcaaggaagatgctcgatgaggggatgatg
ttggagggattccgccgctatgacctctatgaggactgcaaggacgcaggctgccaattc
tctcttaaagtcacccactatcactgcacacgagagaactgcggctataagttctgcggg
cgtacgcacatgtacaaacacgcccagcaccacgaccgcgtggacaatttggtcttggac
gactttaagcgattcaagtcctccctcagctgcaactttgccgactgccagttctctgga
aacagcacccacttccactgcctgcgctgtgaattccgctgcacagacagcaccaaagtt
acagcccaccgcaagcaccacggcaagcaagacgtcatcaatgctgctggcttctgccag
tttagctccagtgtggactgtgaagtgttggattgtaaatacaagctcaagtgctcacac
ttccactgcacctacccggaatgcaaacacacggtggtgggcatgtcacagatggactct
cacaagcgcaagcatgagaaacaagagcggggtgagctgccatccgtgtcacccggcaga
gaggtagcagtaagcacaggagtcaatgcaagggtccctcctgcctcaccagggcctgcg
gatgttcctggcagcactgccaacttcccagcttcctctgaatacggcaaccagggatcc
attagccttgacagctcactgaacctgggtaccgatgcaaacagctctctcttcttcttg
aaaaatgccgttggcatcggccttaatgactcgctggacctcagcaaaaaggtccagaat
gacctgctggtagcagttaactctgtcccctgtggcactaccatgcaggggtctcaggac
gaggccaccgcaacatcaggagaggctgaagatgacctgtcgaatgaggaggagatgaat
gccgaggacgatgacgatgatgacgaggacgacgacgacgacgacgaggaggatgacgat
gaggaagatgacggggaggaggatgatgagttaaacacagactcctatgaagattctgtg
cctgagcctgaaagcctggcaagtgagaaagagaacggagtttgcttcgatgcttccagc
aaccacacagctgcttccggcctacctaaaaaggaccctgcagccgagccctag
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integrated database retrieval system
