Polypterus senegalus (gray bichir): 120530919
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Entry
120530919 CDS
T08668
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
psex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120530919
03015 mRNA surveillance pathway
120530919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120530919
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120530919
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120530919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120530919
NCBI-ProteinID:
XP_039611665
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All DBs
Position
6:30808104..30835906
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AA seq
477 aa
AA seq
DB search
MAANSWALAVDEQEAAAESIGNLHLSEKSKVESNDTAKPEDNVNKTEDDDKDDRAAQSLL
NKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKKQLLDGVYAMGFNRPSKIQENA
LPMMLAVPPQNLIAQSQSGTGKTAAFVLAMLSHVESVNKWPQCLCVSPTYELALQTGKVI
EQMGKFYPEVKLAYAVRGNKLERGMKIQEQIVIGTPGTVLDWCAKLKFIEPKKIRVFVLD
EADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWNFAQRIVPDPNIIKLKREEE
TLDTIKQYYVLCNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQVAL
LSGEMMVEQRAAVIQRFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNET
YLHRIGRTGRFGKRGLAINMVDSKFSMNILNRIEEHFNKKIEKLDTDDIDEIEKIAN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaactcgtgggctctcgctgtagatgaacaagaggctgctgccgagtcgatt
ggcaacttacatctcagtgaaaaatcaaaagttgaatcaaatgatacagcaaaaccagag
gataacgtgaataaaacagaagatgatgacaaagacgacagagcagctcagtctctgcta
aacaaactgattcgcagcaacctggtaaatacaactaaccaagtagaagttcttcaaagg
gatccaaactcaccattgtattctgtcaaatcatttgaagaattaagattaaaaaaacag
ctgttagatggtgtatatgctatgggcttcaacagaccatcaaaaattcaggaaaatgct
ttacctatgatgctcgcagtgccgccacagaatttaattgcacaatctcagtctggtaca
ggaaaaactgccgcttttgtgcttgcaatgttaagtcacgtggagtcagtaaacaaatgg
ccgcagtgcctttgtgtttctccaacttatgaactggcattacagactgggaaagtcatt
gagcaaatggggaagttttacccagaggtgaaacttgcatatgcagtcagaggaaacaaa
ttggaaagaggtatgaaaattcaagaacaaattgtaattggaaccccaggcacagtactt
gactggtgtgccaagttgaaatttattgagccaaagaaaattagagtctttgtactggat
gaagcagatgtcatgattgcaacccagggtcaccaagaccaaagcattcgaattcaaaga
atgttgccaaaagactgccagatgctgcttttttctgctacctttgaagattcagtgtgg
aactttgcacagaggattgtgcctgacccaaacattattaagttaaagcgagaagaggag
actctggatacaatcaagcagtactacgttctttgtaacagcaaagaagagaaattccaa
gccctttgtaacatatatggcgccatcactattgcacaagctatgatattttgccataca
cgaaaaacagcaggctggttagcaggggagctgtccagggaaggtcaccaagtggcacta
ctgagcggtgaaatgatggtagaacagagagccgctgtcattcagcgtttcagggaaggg
aaagagaaagtccttgtgacaaccaatgtgtgtgcaagaggcatagatgtggaacaagtg
tctgttgtcatcaattttgacctgccagtagataaagacgggaaccctgacaatgagaca
tacctgcacaggattgggcgcacaggacgctttggtaaacgaggtctagcgattaacatg
gtggacagcaaatttagcatgaacatcctaaacagaatagaggagcacttcaataaaaaa
atagaaaaattggatacagacgacatagatgaaattgagaagattgccaactaa
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