Polypterus senegalus (gray bichir): 120530924
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Entry
120530924 CDS
T08668
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120530924 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120530924 (copb2)
Membrane trafficking [BR:
psex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120530924 (copb2)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120530924 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
120530924
NCBI-ProteinID:
XP_039611682
LinkDB
All DBs
Position
1:complement(107134431..107164866)
Genome browser
AA seq
921 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGNIIIKLG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLADKVASAQESNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAVNKCQFGLAQECLHHAQDYGGILLLATASGNAAMVNKLAEGAE
KDGKNNVAFLSYFLQGKLDNCLELLITTGRLPEAAFLARTYLPSQVSRVVKLWRESLGKV
NPKAAESLADPTEYENLFPGLKEAFVAEQYLRETSLQNSRPATDYPLVTPNEERNLMEEA
KHYEPKERTIQESEKNEETMLNVSSEQSQHEADVGSKTEEISTSNIKTDETLQELEDDLD
NLDLEDIDTTDVNLDDDFLDD
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagacttgacataaaacggaagttaacagctcggtctgaccgagtgaagagc
gttgacctacatccaacagagccatggatgctagccagtctctataatggcagtgtgtgc
gtgtggaaccatgaaactcagacacttgtgaagacctttgaggtgtgtgacttgccagtc
cgagcttcgaagtttgttgctagaaagaactgggtcattactggagcagatgacatgcaa
attcgtgtatttaattacaacactttggagagagtacatatgtttgaagcacattcagat
tatatccgttgtatagctgtgcatcccacacaaccctacattctgaccagcagtgatgat
atgctaatcaaactttgggactgggaaaagaaatggtcttgcagtcaggtttttgaggga
cacactcattatgttatgcagattgttattaatcccaaggacaataaccagttcgctagt
gcatctctggacagaactattaaggtttggcagcttggctcctcctctccaaactttacc
ctagaaggtcacgaaaaaggtgtcaactgcatcgattactatagcggtggagataagcca
taccttatttctggagcagatgaccgtcttgtaaaaatctgggattatcagaacaagaca
tgtgtacaaactctggaaggtcatgctcagaatgtgtcttgtgttagtttccatcctgaa
ctccctatcatcatcactggttcagaagatggcactgttcgtatctggcattcaagcact
taccgactggaaagtacactgaactatggtatggagagagtttggtgtgtagctagcctg
cgtggctccaacaatgtggcactaggatatgatgaaggcaacattatcatcaagcttgga
cgtgaggaaccagcaatgtctatggatgccaatggaaaaataatttgggcaaaacactca
gagattcagcaagctaatttaaaagctatgggcgatgctgaaattaaagatggggaaaga
ctgcctttagctgtaaaagacatgggaagctgtgaaatatatccacagacaattcaacat
aatcccaatggcagatttgttgttgtctgcggagatggggaatacatcatctacactgct
atggcattacgaaacaaaagctttggctctgcacaagaatttgcctgggcacatgattca
tcagagtatgcaataagagaaagcaacagtgtagtgaaaatctttaaaaatttcaaagag
aagaaatcttttaaacctgattttggtgctgaaggtatttatggtggatttcttttggga
gtgcgatctgttaatgggttggcattttatgactgggaaaatacagagttaattcgacga
attgaaatccagcctaaacatattttttggtcagactctggagaacttgtctgcattgct
acagaagaatcattttttattttaaaatacttggcagacaaggtggcatctgctcaagaa
tcaaatgagggagttacagaagatggcattgaagatgcttttgaggttcagggtgaaatt
caggaaattgttaagaccggtttatgggttggtgactgcttcatctatactagctctgtg
aacaggctgaattattacgttggtggagaaattgtgacaattgctcatttggacaggact
atgtatcttttgggatatattcctaaggataaccggctatacctgggcgataaggaattg
aatattgtcagctattccctgctagtctctgtactggagtaccagactgcagtgatgcgg
agggactttagtatggctgataaggttcttccaactattcctaaggaacagaggaccaga
gttgctcatttcttggaaaagcagggttttaagcaacaagccctggctgtatcatcagat
ccagagcatcggtttgagcttgcgctacaacttggggagctaaagattgcatatcagctt
gcagtagaagcagagtctgaacagaaatggaaacagttagctgagttggctgtcaataaa
tgccagtttgggcttgcccaagaatgccttcatcatgcccaggattatggtggaatttta
ctcctagcaactgcttctggtaatgctgcaatggtcaacaagctcgcagaaggggccgag
aaagatggcaagaacaatgttgctttcctctcctacttcttgcagggaaagcttgacaat
tgtttagaactgcttattacgacaggacgacttcctgaagctgctttcttggcacgtaca
tatctcccaagtcaagtatcaagggttgttaaactttggcgagagtctctcggtaaagtg
aacccaaaggcagcagaatccttggccgatccaacagaatatgaaaacctttttccaggg
ctgaaggaagcatttgtagcagaacaataccttagggagaccagtcttcaaaactcaaga
ccagctacagactatcctctagtcactccaaatgaagagaggaatttaatggaagaggca
aaacactacgagccaaaagaaagaacaattcaggagtctgaaaagaatgaagaaacaatg
cttaatgtaagcagtgaacaatcgcaacatgaagcagacgtgggctcaaaaacagaggag
atttcaacatcaaatatcaaaacagatgagacattacaagagcttgaagatgacttagat
aatttggatttagaagacattgacacaactgatgtaaacttggatgatgacttcttagat
gactaa
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integrated database retrieval system
