Polypterus senegalus (gray bichir): 120530931
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Entry
120530931 CDS
T08668
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit beta'-like
KO
K17302
coatomer subunit beta'
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120530931
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120530931
Membrane trafficking [BR:
psex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120530931
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120530931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_LRRK2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
120530931
NCBI-ProteinID:
XP_039611694
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Position
1:107202691..107277333
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AA seq
787 aa
AA seq
DB search
MGFRLDIKQKLIARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFQVCDLPV
RASKFVARKNWVITGADNMQICVFNYYTLERVHMFEAHSDYIRCIAVHPIQPYILSSSDD
MLIKLWDWEKKWCCSQAFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LAGHEKGVNFIDYYSGVDKPYLISGADDRLVKIWDYQNKTCVQTLEGHFQSVSFVSFHPG
LPIIITGSEDGTVRIWHSGTYRLESTLDYGMERVWCVASMRGSSNVALGFDEGNIIIKIG
HEEPAMSMDASGRIIWAKHSKIQQANLKAMGDAEIKDGEQLPLAVKDMGICEIYPQKIQH
NSNGRFVVVCGDGEYIIYTAMVLRNKSFGSAQEFVWAHESSEFAVRESNSVVRIFKNFKE
KKSFKPDIDAKGIHGGFLLGVQSVNCLAFYGWDNTELIQQIEIQPKHIFWSDSGEFVCIA
TEESFFILKYLADKVASAQESNEGVTEDGIEDAFEVQGEIQEIVMTGLWVGDCFIYTSSV
KRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RNFSMAEKVLPTIPKEQRTRVAYFLEKQGFKQQAMAVSSDPEHQFDLALQLGELKIAHQL
AVEAKSEQKWKRVAELAVNKCQFGLAQECLHHAQDYGGILLLATASGNTVMVNRLAEEAE
KDDKNNVAFLSYFLQGKLDKCLELLLKTGRLPEAAFLARSYLPSQVSRVVELWXSISKVN
PNVAESF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcagacttgatattaaacagaagttaatagctcggtctgaccgagtgaagagt
gtcgacctacatccaacagaaccatggatgttagccagtctctataatggcagtgtgtgc
gtgtggaaccatgaaactcagacacttgtgaagacctttcaggtgtgtgacttgcctgtc
agagcttcgaagtttgttgctagaaagaactgggtcattactggagcagataatatgcaa
atttgtgtattcaattactacactttggagagagtacatatgtttgaagcacattcagat
tatatccggtgtatagctgtgcatcctatacaaccctacattctgtctagcagtgatgat
atgctaatcaaactttgggactgggagaagaaatggtgttgcagtcaggcttttgaggga
cacactcattatgttatgcagattgttattaatcccaaggataacaaccagttcgctagt
gcatccctggatagaactattaaggtttggcagcttggctcctcctctccaaattttaca
ctagcaggtcatgaaaaaggtgtcaacttcatcgattactatagtggtgtagacaagcca
tatcttatttctggagcagatgaccgtcttgtaaaaatttgggattatcagaacaagaca
tgtgtacaaactctggaaggtcattttcagagtgtgtcttttgttagcttccatcctgga
ctccctatcatcatcactggttcggaagatggcactgttcgtatctggcattcaggcact
tatcggctggaaagcacactggactatggtatggagagagtttggtgtgtggctagcatg
cgtggctccagcaatgtagccctagggtttgatgaaggcaacattattatcaagattgga
catgaggagccagcaatgtctatggatgccagtggaagaataatttgggccaaacactca
aagatccagcaagctaatttaaaagctatgggtgatgctgaaattaaagatggagaacaa
ctgcctttagctgtaaaagatatgggaatctgtgaaatatatccacagaaaattcaacat
aattccaatggcagatttgttgttgtctgcggagatggggaatacataatctacactgct
atggtattacgaaacaaaagctttggctctgcacaagaatttgtgtgggcacatgaatca
tcagagtttgcagtaagagaaagcaacagtgtagtgagaatctttaaaaatttcaaggaa
aagaaatcctttaaacctgatattgatgccaagggtattcatggtggatttcttttggga
gtgcaatctgttaattgtttggcattttatggctgggacaatacagagttaattcaacaa
attgaaatccagcctaagcatattttttggtcagactctggagaatttgtctgcattgct
acagaagaatcattttttattttaaaatacttggcagacaaggtggcttcagctcaagaa
tcaaatgagggagttacagaagatggcattgaagatgcttttgaggttcagggtgaaatt
caggaaattgttatgacaggtttatgggttggtgactgcttcatctatactagttctgtg
aaaaggctgaattattatgttggtggagaaattgtgacaattgctcatttggacaggact
atgtatcttttgggatatattcctaaagataaccggctgtacctgggagataaggaattg
aatattgtcagctattccctgctagtctctgtactggagtaccagactgcagtgatgcgg
aggaactttagtatggctgagaaggtccttccaactattccaaaggaacagaggaccaga
gttgcttatttcttggaaaagcagggttttaagcaacaagcaatggctgtatcatcagat
ccagagcatcagtttgaccttgcgctgcaacttggggagctaaagattgcacatcagctt
gcagtagaagcaaagtctgaacagaaatggaaacgggtagctgagttggctgtcaataaa
tgccagtttgggcttgcccaagaatgccttcatcatgcccaggattatggtggaatttta
ctcctggcaactgcttctggcaatactgtaatggtcaacagactcgcagaagaagcagaa
aaagatgacaagaacaatgttgcattcctctcctacttcttgcagggaaaacttgacaaa
tgtttagaacttcttcttaaaacaggacgtcttcccgaagctgctttcttggcacgttct
tatctgccaagtcaagtatcaagggttgttgaactttggncaagcatctctaaagtgaac
ccaaatgtcgcagaatccttctaa
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