Polypterus senegalus (gray bichir): 120530935
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Entry
120530935 CDS
T08668
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120530935 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120530935 (usp48)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120530935 (usp48)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120530935 (usp48)
Ubiquitin system [BR:
psex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120530935 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Thioredoxin_2
Motif
Other DBs
NCBI-GeneID:
120530935
NCBI-ProteinID:
XP_039611699
LinkDB
All DBs
Position
6:complement(31629825..31693677)
Genome browser
AA seq
1046 aa
AA seq
DB search
MAPRLQLERAAWRWVESVRPEDVTAENIETAYRVLLEGCKRGACRRNCKGNPNCLVGIGE
HIWLGEIDENTFHNIDDPNSERRNKNTFVGLTNLGATCYVNTFLQVWFHNLDMRRAIYLC
QNSRAEELAVDDDTDYEPQEICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQ
EFSKLFLSLLEDTLSKQKNPNVQNIIQQQFCGQCAYITVCNHCGRESQLLSRFYELELNI
QGHKQLSDCVTEFLKEEKLEGDNRYFCENCQSKQNATREIRLLNLPHTLNFQLMRFVFDR
QTGHKKKLNTYIGFPEILDMGPFLDKKDEKCVYELNAVLIHRGVSAYSGHYIAHLRDGRT
NDWYKFNDEEIEKMEGKKLQLGSEEDIEPSKSQTRKPKCIKGYHSSRNAYMLVYKRQVEE
VSHSEPNVQVPDFLQRLVDRDNRKFEEWCHEMAEMRKQSVDKGKAKHEEVKEIYELLPAG
DGQAFEFIPLEWLRKWLDDSTVTKPIDNSKFSCCHGKLHPDKIEDVKRISQKAADIFFNR
YGGGPRLDNSSLCRECVVERCRVLRLKNQLNEDYKVISNMVKIVNNSNQGYWIGKASLRS
WRQLALEQLEEEDDELKHANGKANGESISVLDVGGAGDTKDNDDENLNFNEDILCSHGGL
CTSENERKLVSNDVWNRLKTYFPKAPEFPASQESCPKCKTLERECEESEALNKMIANDQK
MALLNLFQDKNRPSLQKWPTETDHLYIVSLFFVEEWKKFIRRPGRCTPVSSVANGALLCP
HGGLMFTYESMSKGDAKHVAVLWPSEWEIINRFFLVDQTIKLSRTTDKPQQDALHIEFQT
DPDLCLECREGLLFQQQRDLREYTQATVYIRKIVDNTKIMKDAAPELNVSGSEAEDEREV
KIGDNDPDFNQINNGAKRQKLSVPSSGSGTLSSSFISHQKQGIRRSTRHRKVRGEKALIV
SANQTLKELKIQIMHAFSVAPFDQNLSVDGRCLTEDSATLGSLGVVPESVIFLKADEPIA
DYSAMDDVLQVCMPEEGFKGTGLLGH
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcggctgcagctggagagagccgcttggcgttgggtcgaatcagtccgaccc
gaggatgtcacagccgagaatatcgagacggcgtaccgtgtactgttagagggatgcaaa
agaggggcgtgcagaagaaactgcaaaggaaacccaaactgcctagttggtataggcgag
catatatggttaggagaaattgacgagaatacctttcacaacatcgatgatcctaattct
gaaaggagaaacaagaacacttttgtaggtctgacaaatcttggtgcaacctgttatgta
aacacatttttgcaggtgtggtttcacaatctagacatgagacgggcaatatatctgtgt
caaaattccagagcagaagaacttgctgttgacgatgatacagattatgaaccacaagaa
atatgtgaacatcttcagtacctgtttgcattgttgcagaatagtaatcgaagatacata
gacccttctggacttgtaaaagcacttggattagacacgggacaacagcaggatgctcag
gaattttctaagctctttctatccttactggaggacacactttcaaagcagaaaaatcca
aatgtacaaaatatcatacaacaacagttctgtggacagtgtgcctatattactgtgtgt
aaccattgtggcagagaatcacaactcttatccagattctatgaactagagctcaatatt
caaggtcataagcaactatctgactgtgtcactgaatttcttaaggaagaaaagctagaa
ggggacaatcgctatttctgtgagaactgccagagtaaacaaaatgctaccagggaaatt
agactgctaaatttacctcatactttgaactttcaacttatgcgttttgtctttgacaga
caaacgggccacaagaagaaactgaacacatatattggttttcctgaaattttagatatg
ggaccatttctggataaaaaagatgaaaagtgtgtttatgagctgaatgcagtgctgata
cacagaggggttagtgcatactctggccactacatagctcatttacgagatggcagaaca
aatgactggtacaaatttaatgatgaagagattgagaaaatggagggaaaaaaacttcaa
cttggaagtgaagaagatatagaaccttctaaatcccagacacgcaaacctaaatgcatt
aaaggatatcattcttcacggaatgcatatatgttggtttataaacgccaagtggaagaa
gtaagccattctgagcccaatgttcaagttccagactttctgcagaggttagtggatcgg
gataaccgaaagtttgaagagtggtgtcatgaaatggctgaaatgaggaaacagagtgtt
gacaaaggcaaagcaaaacatgaagaggtgaaggagatctacgaattgttacctgctgga
gacggtcaggcttttgagttcattccccttgagtggttgcgaaagtggctagatgattct
actgttacaaagcctattgataactcaaagtttagctgctgtcatggaaaacttcaccca
gataaaattgaagatgttaagcgaatttctcaaaaagctgctgacatcttcttcaacaga
tatggaggtggtcccagattagacaattcttctctttgtagagaatgtgttgtggagcga
tgcagggtcttaagattgaaaaaccagttaaatgaagattacaaagttatttcaaacatg
gtaaaaattgtaaacaatagcaaccagggttattggataggtaaagcttctcttcgaagc
tggaggcagttagcacttgagcagttagaagaggaagatgatgaactaaagcatgcaaat
ggcaaagcaaatggagagagcatttctgtcttagatgttggaggtgcaggagatacaaaa
gataatgatgatgaaaatttaaacttcaatgaagatattctgtgctcacatggtgggctt
tgtacatcagaaaatgagagaaaactggtttctaatgatgtgtggaacagactgaagaca
tattttccgaaagctcctgaatttcctgccagtcaggagtcttgcccaaaatgcaagaca
ttggaaagagagtgtgaagaaagtgaagcattaaacaaaatgatagcaaatgatcagaaa
atggctcttcttaatctttttcaggacaaaaatcgacccagtttacaaaaatggcctacg
gagacagatcacctgtatattgtgtctttgttttttgttgaagaatggaaaaaatttatc
aggaggcctggaagatgcaccccagtgtcatccgttgcaaatggtgctctgctctgtcct
catggtggcttaatgtttacttatgagtccatgtccaaaggagacgcaaaacatgtagct
gtgttatggcccagcgaatgggaaatcattaacagattctttcttgtggatcagacgatt
aaactttccagaactacagacaaacctcaacaagatgctttgcatattgagtttcagact
gacccagatctttgtttagaatgtagggaaggtttgctttttcaacagcaacgcgattta
cgtgaatatacacaagcgacagtgtatatcaggaaaattgtggacaatacaaagataatg
aaagacgctgcaccagagcttaatgtgagtggttcagaagctgaagatgaaagagaagta
aaaataggagataacgatccggattttaaccagattaacaatggagcaaagcgacaaaag
ctatctgtgccatcttcaggatcaggtaccctcagtagttcatttattagtcatcagaaa
caaggaataagaagaagtactcgacatagaaaggttcgaggcgaaaaggcacttattgtt
tcggctaatcagacgctgaaagagcttaagatacagattatgcatgcattttctgtagct
ccatttgatcaaaatctttctgttgacggacgttgtttgactgaagattctgcaaccttg
ggtagtttgggagttgttcccgagtctgttatatttctcaaggctgatgagccaatagcc
gattattcagcaatggatgatgtattgcaagtctgtatgccagaagaaggttttaaagga
actgggcttttaggccattga
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