Polypterus senegalus (gray bichir): 120530994
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Entry
120530994 CDS
T08668
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120530994 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120530994 (hspd1)
03110 Chaperones and folding catalysts [BR:
psex03110
]
120530994 (hspd1)
03029 Mitochondrial biogenesis [BR:
psex03029
]
120530994 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120530994 (hspd1)
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120530994 (hspd1)
Messenger RNA biogenesis [BR:
psex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120530994 (hspd1)
Chaperones and folding catalysts [BR:
psex03110
]
Heat shock proteins
HSP60 / Chaperonin
120530994 (hspd1)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120530994 (hspd1)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120530994 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
120530994 (hspd1)
Exosomal proteins of breast cancer cells
120530994 (hspd1)
Exosomal proteins of colorectal cancer cells
120530994 (hspd1)
Exosomal proteins of bladder cancer cells
120530994 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120530994
NCBI-ProteinID:
XP_039611815
LinkDB
All DBs
Position
6:complement(38790833..38810495)
Genome browser
AA seq
569 aa
AA seq
DB search
MFRLASVMRRTPVLASRLTRFYAKDVKFGAEARALMLQGVDLLADAVAITMGPKGRTVII
EQSWGSPKVTKDGVTVAKAIDLKDKYRNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA
KEGFDKISKGANPVEIRRGVMLAVEAVINELKKQSKPVTTPEEIAQVATISANGDKEIGN
IISDAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQDAYL
LLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAVKAPG
FGDNRKNQLRDMAIATGGAVFGDEALNLTLEDIQPHDFGKVGEVIITKDDTMLLKGKGDK
DAIEKRVQEIVEQLEVTNSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDA
LNATRAAVEEGIVLGGGCALLRCIPALDGIKPANEDQKIGIEIIRRALRIPAMTIAVNAG
VEGSLVVEKILQSSSDIGYDALAGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLSTAEA
VVTELPKEEKEPAMGGGMGGMGGMGGGMF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcttggcaagtgtaatgagacggactcctgtccttgcttcacgcctcacccgc
ttttatgcaaaggatgttaagtttggtgcagaagcaagggctctgatgttgcagggggtt
gatctgttggcagatgcagttgctattaccatggggccaaagggccgaactgtgatcatt
gaacagagctggggaagcccaaaggtaactaaagatggtgtgacagtggccaaagctatt
gatttgaaagataaatatagaaacattggtgccaagctcgttcaggatgtggccaacaat
accaatgaagaggctggtgatggtactaccaccgctacagtactggctagagctattgcc
aaggagggatttgacaagatcagcaagggtgccaatcctgtggagatccgcaggggtgta
atgttggcagtagaagcagtcatcaatgaacttaagaagcagtctaagcctgttaccacc
ccagaggagattgcacaggtagcaacaatatctgcaaatggagataaagaaattggcaat
attatttctgatgcaatgaagaaagtaggccgcaaaggagtcattactgtcaaggatggt
aaaacacttcacgatgagcttgaaatcatagaagggatgaaatttgaccgaggctatatc
tccccatactttattaacacagcgaaaggacagaaatgtgagtttcaggatgcttacctt
ctcttgagtgaaaaaaagatttctagtgtacagtccattgttcctgctcttgaaattgca
aaccagcatcgcaagcctctcgttatagtagcagaagatgtagatggggaagcactcagc
actctagtacttaacagactgaaggtgggactacaggtggtggctgtgaaagcaccaggc
tttggggataaccgaaagaatcaactaagggatatggcaattgctacagggggagctgta
tttggagatgaagcactcaaccttactcttgaagacattcagcctcatgattttggaaag
gttggtgaagttatcataaccaaagatgataccatgcttttgaagggcaaaggagacaaa
gatgctattgagaagcgagtacaggaaattgtggaacagcttgaagtgaccaacagtgaa
tatgagaaagagaagctcaatgaacgcctagctaaactctcagatggtgtggctgtgctc
aaggttggtggaacaagtgatgttgaggtaaatgaaaagaaagacagagtaactgatgca
cttaatgccactcgtgctgcagtggaggagggcattgtccttggtggaggctgcgctctc
ctaagatgtattccggcattggatggtatcaaacctgctaatgaagaccaaaaaattggc
attgaaatcattcgccgtgcactacgcatccctgctatgacgattgctgttaatgcagga
gtggagggttctcttgtggttgagaagattcttcagagttcttcagatattggctatgat
gcacttgctggggaatatgtaaatatggtagaaaaaggcatcattgatcccaccaaggtt
gttcgaactgcactactagatgctgctggggtggcctctctgctttctactgctgaagct
gttgtgactgagctgcctaaagaagaaaaggagcctgccatgggtggaggaatgggtggc
atggggggtatgggaggtggaatgttctaa
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