Polypterus senegalus (gray bichir): 120531030
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Entry
120531030 CDS
T08668
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psex03037
]
120531030 (nphp4)
Cilium and associated proteins [BR:
psex03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
120531030 (nphp4)
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GFIT
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NCBI-GeneID:
120531030
NCBI-ProteinID:
XP_039611926
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Position
6:49079149..49800138
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AA seq
1437 aa
AA seq
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MLRSVNPRSEACFNHFLWVLKKKRIIQPNPRWQLPCQVQQSLPYSLILGPLHGILDNSRV
QNLLSGLQGVQLQVRVTLFDISYRHFFGQTWKSPTKAVKNVSGQMPKVPFNEAIYFHTPL
NHPNIVAVVEIVALAQKKGSSERTISCGFGIVRLFPGQSDSTQHGMTKQEKRLNLFHGTP
RALLNPELLEPTEQSKFLTLIEGAHIKYSFCPHPALEQVMHLLPQNLLVSGSDTIPGVVQ
PVADIADCLREPRLQKNISCYLDKVSLSLYPTLDVFEEELLNLLNADRLTREDTGPDGNA
VVIQERRLHVGVHNGWTFVAKPQVVVVEPVAEGLSRGRSGSFSIRRNSVTQSSSSGQQTM
LLLRSQLHLNEMVKHPAFVITFQLEYVFSTVTGGDIKALASSKTAFMHSIRWAVWSPFEK
PGNSEVCISLQGGPLPNPNNVMVYKTSGSESTTPGVKAVKGGVLKFYFIQQEGHPASPAH
EMSQQKITQSPSQRRITSQLMSSPPETPPGPALSMSQLSTSPQYPKVKDTTRSQYKQLQR
TSKDLPYVTSIVHLEADLSQSAIVPEPSEADQLQELPFAPVQAPVITLGPHISSSSVTMS
RRSLAQFHTSGFPDILDCHNEIAEVTHPSDPVSFDPLQEEGDFLLSNEIVLQFLAFTRLA
QEGQQMDWPKSIYFTFQFYRFPAVTTQRLLLVNPDGSGCSTRDHPPCVLLQVNKDGTICT
GSPGLQLKYMVNPSFLKPGEKRCFIDYIAFHPLQIDVWDADSLLLIGSTSVTLKHLLRQG
RPAVQVTHELDIVSTDYVQDLTAFRNDSLHQASVQPYSVSIIVKGRLNLRLGNVGHLADH
QGSRSDTLPPSTSRVISAYDRTISFPGGSLSSLGLSHLNAKNTCRARRLADIDSELASML
CSRMKEANITLQHISQESDKIHQRKLERMMAVRQLESDKNQSEVKSYIMTRREERIQHLK
DLQLIEAYRERSKTENITSMLSHAITTQHTIYASLGNAQFFEFALKNPFNVQHTITITCK
DPELSVIVDSREWRYFKELTKTLTPLEEDMFYLKGNTLYPQVYLRPKETIYIPFKYQRFS
ADHTVLGQGPAGLPSSQSTDVALRQLLKDVQPKIIKIFFRTEDEKPLAICQVNVENTPHV
IDQTFRFYHPELTFLKKSIRLPPWHTPPGAPAGMSFGEPQVHVRCSDPNVICKTHAMPPG
EPQDVFLKVAAGPSPQIKKFFIIIYTDPWMAVPFQIWQLYIHFLQRIDVSCVIGQTSRLS
LVLRGTQAVRKVRCYTSHPQELQTDPAETFVLPPGAVQDLHVRVCPRREGSKFIYLNVVD
VDYHHLVASWLVCVSSRQPLISKAFEISIPVGGGKGSNKKITYTNPYPTRRAYFLRTNRS
DLLQFKEDAFETGGGESYTIGLRFAPSQCPGVEEILIYINDQEDKNEETFCVKVIYF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcagtgtgaatccaagaagtgaagcttgctttaatcactttttatgggtcctc
aaaaaaaagagaattattcaaccaaatcccagatggcaactaccatgtcaagttcaacag
tctttgccttactctttgattcttgggcctcttcatgggattttggataacagtcgggtg
cagaatctcctgagtgggcttcagggagttcaattacaagttcgtgttactctctttgac
atcagttaccgacacttctttggtcaaacatggaaaagtccgacaaaagcagtgaaaaat
gtatctggacaaatgcccaaagtgccttttaatgaggccatttatttccacacccctctc
aatcatccaaacattgtcgctgttgtggagattgtggctttggcacaaaagaagggttca
tctgagcggaccatatcatgtggttttgggattgtccgtctctttcctggacagtcagac
tcaacccagcatgggatgaccaagcaggagaaaaggttgaatcttttccatgggacacca
agagcactgctaaaccctgaattgcttgagccaactgaacagagtaaatttctgacactg
attgaaggagctcatataaagtactccttctgtccacatccagcactggaacaggtgatg
catctactgccacaaaacctgctggttagtggtagtgacacaatcccaggagtggttcag
cctgtggcagacatagctgactgcctgcgggagccacgtttgcagaaaaacatatcctgc
tacttagacaaggtatccttaagcctataccctacccttgatgtctttgaagaagaatta
ctcaacctccttaatgcagatagactaaccagggaagacactggaccagatgggaatgca
gttgtaattcaggagcggcgactacatgttggtgttcacaatggatggacatttgtggcc
aagccacaggtggtggtagttgagccagtagcagaggggctttcccgtggaaggagtggc
agtttttccattagacgaaactcagttactcagagcagctcttctggtcagcaaacaatg
ctactactaagaagtcagcttcaccttaatgagatggtgaaacaccctgcatttgtgatt
acctttcagcttgaatatgtcttctcaactgtaacaggtggcgacatcaaggcactggca
tcctcgaagactgcctttatgcactccatccgttgggctgtttggagcccgtttgaaaag
cctggaaactcagaggtttgcatcagccttcaaggaggacccctgcccaacccgaacaat
gtaatggtgtacaagacttcaggaagtgaatcaactacccctggggtgaaagcagtcaaa
ggtggtgtgcttaaattttatttcatacagcaagaaggacatccagcaagtcctgctcat
gaaatgtcccagcagaagattactcaatctccatctcagaggcggattacttctcagctt
atgtcttctccaccggagacaccacctggccctgctctctcgatgtctcagctttctaca
tcaccacagtacccgaaggtcaaggataccacgcgatctcaatacaagcagcttcagcga
acttcaaaggaccttccttatgtaactagtattgtccacttggaggcagacctgagtcaa
tctgccattgtgccggaaccctctgaagctgatcaactgcaagagcttccttttgctcct
gttcaagctcctgtcattaccttgggacctcatatttcaagctcaagtgttactatgtcc
aggaggtctctggcacagtttcacacttctggctttcctgacattctggattgtcataat
gagatagcagaagtcacccacccatctgacccagtcagctttgatcctctacaagaagaa
ggagactttcttctgtctaatgagattgtcctgcagtttcttgctttcacaaggcttgca
caggaaggacaacagatggactggcccaaaagcatttattttaccttccagttttatcga
ttccctgcagtaaccacacagaggcttctccttgtgaacccggatggatcaggctgtagc
actcgggaccacccaccctgtgtcctccttcaagttaacaaagatggaacaatttgcaca
ggatcccctggtttgcagttaaagtacatggtcaaccccagcttcctgaagccaggagaa
aaacgctgtttcatagattacattgcctttcacccactacagatagatgtgtgggatgct
gattccctgcttttgataggctctacatctgtcacacttaagcacttactgcgacaaggg
agaccagcagtgcaagtgacccatgagttagacattgtctcaactgactatgttcaggac
ctaacagccttcagaaatgatagcctacaccaggcatctgtccagccctacagtgtgtct
atcattgtcaaggggagactgaatcttcgcttggggaatgttgggcatcttgctgatcac
cagggaagtcgtagtgatacccttccaccatccacctcaagggtcatctctgcttatgat
aggaccatcagctttccagggggaagtctgtcatctcttggcctcagtcacttaaacgca
aagaacacttgtcgagcacggcggcttgctgacattgattcagaactagcatccatgctc
tgcagtcggatgaaagaggcaaatatcactcttcagcacataagccaagaatcagacaag
atccatcagagaaaactagaacggatgatggctgtgcggcagttagagtcagataaaaac
caaagtgaagtgaaatcatacatcatgactcgtcgagaagaacgcattcagcacttgaag
gatttgcagctaattgaagcctatagagaacgtagcaagacagaaaatataaccagcatg
ctgagtcatgccattactacacagcataccatctatgcctcactgggcaatgcacagttt
tttgagtttgccctaaaaaacccttttaacgttcaacatactataacaatcacctgcaaa
gacccagagctaagtgtgattgtggactccagggaatggaggtactttaaggaattgacc
aaaaccctgacacctttggaagaagacatgttttatcttaaaggaaacacactatatccc
caagtctatctccgtcccaaagagaccatctacataccgtttaagtatcaaagattttca
gcagatcacacagtgttaggccaggggccagcaggtcttccatctagtcagagtactgat
gttgcactgaggcagctgctgaaagacgtccagcctaagataattaagatattctttagg
acagaagatgaaaagcccttggcaatctgtcaggtgaatgtggagaatacaccacatgtt
atagaccagactttccgattctaccaccctgagcttacattcctgaaaaaatctatacgc
ctgccaccctggcacaccccacctggtgctccagctgggatgtcgtttggagaaccacag
gtgcatgtgaggtgcagtgacccgaatgtcatttgcaaaacccatgcaatgccccctgga
gagccacaggatgttttcttgaaagttgctgctggtcccagtcctcagattaagaaattc
ttcatcataatatacacagatccatggatggcggtcccttttcagatctggcagttgtat
atacactttctgcagcgtattgatgtcagttgtgttataggacagacaagccgactctct
ctggtactcagaggtactcaggctgtgaggaaagtcaggtgctatacatctcatcctcag
gagctccagactgatccagcagaaacctttgttcttccaccgggtgctgtgcaggatctg
catgtcagagtttgcccccgccgggaaggtagcaagttcatctacttgaatgtagttgat
gtggattatcatcatctggttgcttcctggctggtctgtgtgtcatcaaggcagcctctt
atttctaaggcttttgaaatctctatccctgtgggaggtggaaaggggagcaacaagaaa
attacctacacaaatccatatcccaccaggagagcttactttttacgcacaaaccgctct
gatctgctgcagtttaaggaggatgcctttgagactggagggggggagtcatatactatt
ggactgcgttttgcacccagtcagtgtcccggtgttgaggagattctcatttatatcaat
gatcaagaggataagaatgaggaaaccttctgtgtcaaggtcatctatttctaa
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