Polypterus senegalus (gray bichir): 120531167
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Entry
120531167 CDS
T08668
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120531167 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120531167 (xrcc5)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
120531167 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF1623
Motif
Other DBs
NCBI-GeneID:
120531167
NCBI-ProteinID:
XP_039612266
LinkDB
All DBs
Position
6:72141599..72245660
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AA seq
724 aa
AA seq
DB search
MARAGKAAVVLCLDVGFSMSNSPPGAEQPFVQAKKLVEAFVQRQVFSESKDELAVVLFGS
DRTRNSLATDGQYQNIFVMRNLMLPDIELLEEIQNLVQPESQQADILDALVVCMDLLQNE
ICGKKYEKLHIAMFTDLCSSFNSDQLDVIIANLKKGGISLQIFLPFALDADDHAGHRGDA
AESRGPQHSWKGLTQQQKDGLALVKKMMTSLDEDGLEEIYTFSESLEKLTLFKKIERKPM
AWPCQLTIGSSLSIRIVGYKAVTEEKVKKTWSMVEAQTLRKDDVRKETVYCLNDDNETEI
QKDNTIQGYRYGSDIVPFSKVDQEQMKYKADGKCFSVLGFTKESQVLRHQFMGNQVIKVF
APKDDEHAAVALSALIHSLNEMEMVAIVRYVYDRRCNPQVGAAFPFIKDKYECLIYVQLP
YMEDLRLFSFTSLENNRKYTPSGEQLAAVDSLIESMMLVVDKDEEREDIFKVSKIPNPQF
QRLFQCLHHRALNPTAPLPSMEQSLRTALDKPQEVTASCLGSLQQVQRCFPLQEAALKKE
QKTAQDIFGASKEEPDVKKPHLEAGGDFNISELSEGSVTAVGSVDPVRDFRIIIRQKSLP
FNNACNQLINRIDQLLGTKGTQYYIKSIACLQAFREESIKASQVELFNNYLQTLKSNIEE
RALQDFWELLVQDKVSLISKSEVEGSTVSVMESNLFLTTEEKQNDHTESPKDDGGDVDDL
LDMM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggctggaaaggctgctgtggtgctatgcctagatgttggattctccatgagt
aactctccaccaggtgctgagcagccatttgttcaggccaagaagctcgttgaggctttt
gtgcaaagacaagtgttttctgaaagcaaagatgaacttgctgtggtgctgtttgggtct
gataggactaggaattctttggccacagatggtcaatatcagaatatctttgtgatgaga
aatcttatgctaccagacattgaacttttagaagaaattcagaatttggttcagccagaa
tcccagcaagctgacattcttgatgcattggttgtttgtatggatctactgcaaaatgag
atatgtggaaaaaagtatgaaaagctgcacatagcaatgtttactgacctctgcagttca
tttaattcagaccagcttgacgtcattatagccaatttgaagaaggggggcatttctctg
caaatctttttgccttttgctttggatgcagacgaccacgcaggccaccgaggagatgct
gctgaatcaagaggacctcaacattcatggaaagggttaacacagcaacaaaaagatggt
cttgctttggttaagaaaatgatgacttctcttgatgaagatggcttagaagagatctat
acattcagtgagtcactggaaaaattaacgcttttcaagaagattgagaggaagcccatg
gcctggccttgtcagcttacaattggcagctctctttctatccgaattgttggatacaaa
gcagtaacagaagaaaaagtaaagaaaacatggtccatggtggaagctcagactcttcgt
aaagatgatgtgcggaaagagacggtctactgccttaatgacgataatgaaactgagatc
caaaaagacaacaccattcaaggttatcgctatggtagtgacattgtccctttctccaaa
gttgatcaagagcagatgaagtataaagcagatggaaaatgtttctctgttctaggattc
acaaaggaaagccaggttttgcgacaccagtttatgggtaaccaagtgattaaagtgttt
gcaccaaaggatgatgagcatgcagccgtagcactctcagcactgattcattctttgaat
gagatggagatggtagctattgttcgctatgtttatgacagaagatgcaatcctcaggtg
ggggcagccttcccatttatcaaggataaatatgagtgcctgatctatgtacaactgcca
tacatggaggatctcaggctgttttcatttacctcccttgaaaacaatagaaaatatact
ccgtcaggtgagcagttggctgcagtagattctctcattgaatcaatgatgctggtggtt
gataaggatgaagaaagagaagatatttttaaagtcagtaaaataccaaatccgcagttc
caaagactttttcagtgtctgcatcaccgtgcgctgaatcccacagctcctttaccatca
atggagcagtcattgaggacagctctggataaaccacaggaagtgacagccagctgtcta
ggctcactacaacaagttcagcggtgctttcccttgcaagaggctgcactgaaaaaagag
caaaagactgcacaggacatctttggtgccagtaaagaagaaccagatgtgaagaaaccc
catcttgaagcagggggagatttcaacattagtgaactatctgaaggcagtgtaactgca
gtgggcagtgttgatccagttcgagattttcgcattataattcgtcagaaaagccttcct
ttcaacaatgcatgcaatcagctcattaacaggattgaccaacttcttgggaccaaaggc
acacagtattatataaagagcattgcatgccttcaggcctttagagaagaatccattaag
gcttctcaagtagagctattcaataattatcttcaaactctcaagagcaacattgaagaa
agggctttgcaagatttctgggagctcctagttcaagataaagtgtcactaattagtaaa
tctgaagtggaaggcagtacagtatcagtaatggagtcaaatttgttccttactactgaa
gagaaacaaaatgaccacactgaatcacctaaagatgatggaggagatgttgatgatttg
ctggatatgatgtga
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