Polypterus senegalus (gray bichir): 120531191
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Entry
120531191 CDS
T08668
Symbol
obsl1a
Name
(RefSeq) LOW QUALITY PROTEIN: obscurin-like protein 1a
KO
K19574
obscurin-like protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120531191 (obsl1a)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
120531191 (obsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_4
Ig_6
Ig_5
C2-set_2
V-set_CD47
Izumo-Ig
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
120531191
NCBI-ProteinID:
XP_039612305
LinkDB
All DBs
Position
6:76953640..77082681
Genome browser
AA seq
2521 aa
AA seq
DB search
MDVFGGXPRFLAYPRPLVVPSGTDAVLKCQIAGDPRPTVIWERGNQQLQAAGRYRLFEDG
NVYNLIISKADENDSGQYICKAKNIIGETYAAATLKVQGDAEVRELREENRPSFLIKPLS
ARVGRGEDAVFSCKLWGKPRPEVIWHKDGKKLNDIFESSHFSVSHQDGGWFQLKIFQTRA
PDGGVYTCLARNEFGEALAGAVLLVDAGPGHEEDGVRNGYSNGHWKPHVGNRGARINAIQ
QIEEPLSVSSAKVKMFTVTEGKHAKFRCYVTGKPKPEIMWRKDGKIVISGRRHLLYEDRE
GYFTLKVLYCKQQDSGLYVCAASNTAGQTLSAVHLYVKEPARKFKQPLNDVEVREREQAV
LECEVPDHSVPTTWYLEDRRLHPGAKYDIEQWGTVRRLTIRDIGADDDGIYLCEMADGER
SIAEVSVRGTIVRKLPRKVDVLEGENAAFCVEVEEEEMDVHWFKDGKELRETHQTIIKSF
GKTHFLVFVNASPQDSGLVTFIVGESKTSAHLRVRAIRQCPPSCPIGVQMNTERANAALM
SWVPALDSRKNPPSGYVLERQEAGSHEWLQCLTTDSASAVEILGDSVPSEADYNFRICSF
NKYGRSGHVEFPGFVHLVPVARIQTPLQDALVPVGTDAEFFIELSASVIGTWFLNGTQLQ
ENEKCVIHHYRTQHFLLLKDVQMCDDRSEITFIAYGVRDSAVLSVQAPPVKFSILPETER
DRKVEAGSPIVLYCEVSDQNAAVRWFKDGKELHPQEDLQIQSEGTMRRLILQSADFSHSG
IYSCDVIDDVITFKIEVQAPPVKFSILPETERDRKVEAGSPIVLYCEVSDQNAEVRWFKD
GKELHPQEDLQIQSEGTMRRLILQSADFSHSGIYSCDVIDDVITFKVEVQAPPMKFAALP
EEDCKKVVRTGSPVVLSCEVSDPEAQVCWYKDGEELHQDSNINMQSEGTVRRLIIDSAGA
SHSGVYRCDSTNDAVSFLVDVKAPPVTVAPLSEVDLNKNLEAGSPLVLTCEVSDPSAVVH
WYKDKQELRQEDFEIQSEGTTRRLLIPSTDFSHSGVYSCDAVDAVLTFNVNIEAPPVKFI
PVPEGDLHKTVLESDPVVLYCELSRSDAPVHWYKDGAEIQPGEDMIVQSEGTMRRLIIQA
AKLSDSGVYACHAVDDTMIFKVNIREPPVTIIQPCDDVHLQYNVSDKIVLNCELSRANAA
VHWYKNGHEIPESEGVILESDGCLRKLTILKGRVEDSGEYVCDTNDDSKFYEVSVTEPAV
QIVYPDKSPVDLRFPTAERVLLTCEVSRSNAAVRWYRDGLEVDRSENLILEEEGVYRRLI
LCCASVEDSGEYICDASDDSVTFNVIISEPPVKFLYPDKSSVVKSFVGEPLELQCEVSRP
NAVVCWLKDGMKIEEREGVCIEEDGIFRRLTIQSAHFQDSGKYLCNAKDDVRKFKVKVTE
APVLILRKEELKTEQECLVSDDVILECELSRIDGIVKWYKDGEKIVDNDRICLEEEGTFR
SLVILNAEISDSGEYFCDAQDDSVVFHIKVKEPPVFIVGNTDSPEHHSLIAGDDLVLSCE
LSRPTATVQWYFNGKMLTADSRTRIKSHGTVRQLVISGLTTLDSGNYTCDAGDDKMVTTV
TIQEPALKILNKEDAMEPIEVLENGSVTFYVQLSKEDASVQWLRNWKEINDKRICSSSDG
KSRKLTIRQAQLSDSGVYTCDASTDEVHFTLQVKVAPIKFEHKQEKPEEILAVESKSTVM
SAVLSSEKSVVKWLRHRSQIFDSNKYETRVEGRVHSLIVKNTCKEDCGMYTCISQDDEMV
FVVNVKELPLTFVRGLQHISAYKDDTITLRCELCKPKGDVQWLKDGQEILPSRRTVIKAE
GRERLLTINRATGSDSGEYVCESKDDRTCAQVSVEMPRVVEFIAELHNVTVLEGEDATFK
CMVSPEDAELVWHRNGNVVVPDERCMVSRNGLCHTLVIQNCQLIDNSKVTAEAEGVVSKA
NLQVQEAQVLFTKKLEASIGEEHGEATLEVEVSLESGEVQWMRQGVVIQSSPKFTLNASG
KKRSLTVHNLSISDRGTYRCETLHDRTQGKLMVEPRKISVLKGLADTDTFERETATFEVE
LSHVDVEGVWQKDGIRVKPHNNWRVSTNGKVHSLTLSNLTIEDSGTVTFSGENIKTSARL
LVKELPVIFIKQMEDLRIPDTSSALFECELSRHTAQVKWLKDSEIIKPKKNYRIYSMGRK
RFLQIINCTLEDSGTYTCDAGDCNASAVLEVYEREVQIVQGLKDVVIQEDENAVFVCEIS
VENIKGEWFKNGEKIKPTSTTKIRHEGTKHFLLICNVKPEDSGEIRFVAKETESSACLEV
EELPVHFVKPLRDKTALEKHRVILECTVSNPRSCVRWYRGDNLILPSDHYEICSEGCYRK
LVIHQVTSMDEGTYSVQAGEHQCSARLMVEEQAILVVRQLADVEVTAPETACFECEVSVP
VIKPPQWSLNGQLLQNGNGVRIESLGTIHRLVLKETSSDMSGLVKFTAGKARSSARLNVK
S
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttttggaggtngccctcgcttcctcgcctacccccgcccgctggtagttcca
agtggcacagatgctgtgctaaaatgtcaaattgctggagatcctcgaccaactgtcatt
tgggagagaggtaaccaacagcttcaagctgcaggccgctaccgactttttgaggatggc
aatgtttataatttaatcatctctaaagcagatgagaatgacagtggtcagtacatctgt
aaagccaagaacatcattggagaaacgtatgctgcagctactcttaaggttcaaggtgat
gctgaggtgagagaacttagagaggagaacaggccttctttcctcatcaaaccactctca
gctcgggttggtcggggcgaggatgccgttttctcttgtaaattatggggaaaaccccga
ccagaagtgatatggcataaagatggcaagaaactgaatgacatttttgagagctcacat
ttcagtgtctcacaccaagacggtggctggtttcaactaaaaatatttcagacacgggca
cctgatggcggtgtttacacttgtttggctagaaatgagtttggggaggcactagctggt
gctgtgcttttggtcgatgctggaccaggacatgaagaagatggagttcgcaatggatac
tccaatggccattggaagccacacgtagggaatcgaggggccaggataaatgctattcag
caaattgaggagccactgtcagtaagttcagcaaaagtgaaaatgttcacagtaacggaa
ggcaagcacgccaagttccgatgctatgtcactggaaagccaaaaccagagatcatgtgg
agaaaagatggcaaaatagtgatatctggaagacgacaccttctatatgaagatcgtgag
ggctattttacattaaaagttctctactgcaagcaacaagatagtgggctttatgtctgt
gcagcttccaacacagcagggcagacactcagtgccgtgcacctctatgttaaggagcca
gcaagaaagttcaagcaacccctgaatgatgtggaggtacgtgagcgagaacaggctgtg
ctggaatgcgaagtaccggatcactccgttccaactacttggtacctagaagaccgacga
ctacacccaggtgcaaaatatgacattgagcagtggggcacggtgaggcgtctcaccatt
cgggacattggggcagatgacgatggcatctatctctgtgagatggctgatggggaacgg
agcattgctgaagtatcagtcagaggaaccatcgttcgtaagctcccccggaaagtggac
gttttggaaggtgagaatgctgctttctgtgtggaagtagaagaagaagaaatggatgtc
cactggtttaaagacggaaaagaactgagagagacccaccagacaatcatcaagtcattt
ggcaaaactcacttcctagtttttgtaaatgcatcccctcaagattcgggacttgtcaca
ttcattgtgggtgaatcaaaaacttcagcccatcttcgagtcagagctatccgacagtgc
ccacccagctgtcccattggagtgcagatgaatacagagcgggccaacgcagccttgatg
tcttgggtcccagccctcgactcacggaagaatccgccatcagggtatgtgctggagcga
caggaagccggttcccatgagtggctgcagtgtttgaccactgattctgccagtgccgta
gagatccttggcgatagcgttccctcagaagcagattacaacttccgcatctgcagtttt
aataagtatggcaggagtgggcatgtagaatttcctggatttgttcacttggttccagtt
gcccggattcagactccactacaagatgccctagtacctgtgggcactgatgcagaattt
tttattgagctctctgcttctgtaattggaacctggtttttaaatggaacccagctccaa
gaaaatgagaaatgtgttattcaccactatcgaacacagcatttcctgctcctcaaagat
gtacaaatgtgtgatgacagatcagaaattacttttattgcttacggagtaagggattca
gcagttctttctgtacaagcaccacctgtgaaattttccattttaccagaaacagagcgc
gatagaaaggtcgaggctggcagccccatagtgctgtactgtgaggtctcagaccaaaac
gctgcagttcggtggttcaaggatgggaaagaacttcatccacaagaagaccttcaaatc
caatcagagggcacaatgagaaggctaattcttcagtcagcagatttcagtcattctgga
atatacagctgtgatgtcattgatgatgtcatcacattcaagattgaagttcaagcacca
cctgtgaaattttccattttaccagaaacagagcgcgatagaaaggtcgaggctggcagc
cccatagtgctgtactgtgaggtctcagaccaaaacgctgaagttcggtggttcaaggat
gggaaagaacttcatccacaagaagaccttcaaattcaatcagagggcacaatgagaagg
ctaattcttcagtcagcagatttcagtcattctggaatatacagctgtgatgtcattgat
gatgtcatcacattcaaggttgaagttcaagctccaccaatgaagtttgcggctcttcca
gaagaggactgtaagaaggttgttcgcaccggcagtccagttgttctttcctgtgaggtg
tcagaccctgaggcccaagtgtgctggtacaaagatggagaggaacttcaccaagacagc
aacattaatatgcagtctgaaggaacagtaaggcgcctgatcatcgattctgcaggggcc
tctcattccggagtttaccgctgtgactctactaacgatgcagtgagcttcctcgtcgac
gtcaaagctccaccagtgacggttgcccccctttctgaagtggatctcaacaaaaatctt
gaagcaggaagcccacttgttctgacatgtgaagtgtcagatccgtctgcggtggtacac
tggtacaaagacaaacaagaacttcgacaagaagactttgaaatccaatcagagggcacc
accagaagactgctcatcccatccactgacttctcgcattctggagtatacagctgtgat
gctgtagatgctgtcctcacttttaatgtgaatattgaagcaccacctgtgaaattcatt
cctgttcctgaaggggacctgcacaaaacagtcttggagtcggatcctgttgtgttgtat
tgtgagctctctcgatctgacgctcctgttcactggtacaaagatggggcagaaattcag
ccaggagaagacatgatagtccagtcagaaggaacaatgaggaggctcatcatccaggca
gcaaagctctctgattcaggcgtatatgcctgccacgctgtagacgacaccatgatcttc
aaggtcaacattcgagagcctcctgttacaataattcagccatgtgatgatgtccacttg
cagtacaatgtttcagacaagattgtcttaaattgtgagctgtctcgtgcaaatgcagct
gtacattggtataagaatggtcatgagatcccggaaagtgaaggtgtaatcttggaatct
gatggttgtctacgaaaactgactatccttaagggacgggttgaagattctggagaatat
gtctgtgatactaacgacgactcaaaattttatgaagtttctgtaacagagccagcggtt
cagattgtataccctgataagtctcccgtagatcttagatttccaaccgcagagagggta
ctgctcacctgtgaagtttccagaagtaatgcagcagttcgttggtaccgagatggactt
gaggttgacagaagtgaaaatttaatcttggaagaagaaggagtttacagaagacttatc
ctctgttgcgcatcagttgaggactctggggagtacatctgtgatgcatctgatgactcg
gtgaccttcaatgtcataatttcagaaccaccagtgaaatttttgtatcctgataaatca
tcagtagttaaatcttttgtgggagagccgctggagctgcagtgtgaggtatcgaggcca
aatgcagtagtgtgctggctaaaggatggaatgaaaatcgaggaacgtgaaggggtctgt
attgaggaagatggtattttccgtcgcctgactatacaatcagcacattttcaggattca
gggaagtacttatgcaatgctaaagatgatgtgaggaaattcaaggtgaaggtcactgag
gcaccagtactgatccttagaaaagaagagctaaagactgaacaagagtgtctagtgtca
gatgatgtgatactggaatgtgagctgtcacgaatagatggtattgtaaagtggtataaa
gatggtgagaagatagtcgataatgatcgtatctgcttggaagaagaggggacgtttcgg
tcacttgtcattttaaatgcagaaatctcagattctggagagtacttttgtgatgctcaa
gatgatagtgttgttttccatattaaggtgaaagagccaccagtgttcattgttggaaac
acagacagccctgaacaccacagccttatagcaggagatgacttagtgctgtcctgtgaa
ctgtcgcgccccactgccacagtgcagtggtatttcaatggaaagatgctcacagcggac
tctcggactcgaataaaatcccatgggacagtgcgacaactggtgatctcaggcctcacc
actttagactcaggaaattacacttgtgatgccggagatgacaaaatggtcaccacagta
acaattcaagaacctgccctaaagatcttgaacaaagaagatgccatggagccaatcgaa
gttttagagaatggtagcgttactttttacgtccaactctccaaggaggatgcatcagtg
cagtggctcaggaactggaaagaaatcaatgataagcgaatctgctcaagttctgatggg
aaatctcgcaagttaaccatccgccaggctcagctttcagacagcggtgtgtacacgtgt
gatgccagcactgatgaggtccatttcactctgcaggttaaagtggcccctattaagttt
gaacacaagcaggaaaagccagaagaaattcttgcagtggagtccaagagcactgtgatg
tcggctgtgttgtcaagtgagaagagtgtcgtgaaatggttacggcatcgcagccaaatt
tttgacagcaataaatatgagacgcgcgtagaaggaagagtacacagcctcatagtgaaa
aatacatgcaaagaagactgtggcatgtatacctgcatctctcaggatgatgaaatggtg
tttgttgtcaacgtaaaagagctgccactgacatttgtgcgaggcttacaacacatcagt
gcgtacaaggatgacaccatcactctaagatgtgaactctgcaagcctaaaggggatgtc
caatggctaaaagatggtcaagagatccttcccagcaggcgaactgtaattaaagcagaa
ggtcgtgaacgattgttgaccattaaccgtgcaacgggcagtgactcaggagagtacgtc
tgtgagtcaaaggatgataggacctgtgctcaagtttctgtggaaatgcccagagtggtg
gaattcattgcagagctacataatgttactgtactagaaggggaagatgccacgtttaag
tgcatggtttctccagaagatgctgagctggtttggcacagaaatggcaatgtggttgtt
ccagatgagaggtgcatggtatcacgcaatgggttgtgccacacgttagtcatccagaac
tgtcaactgatagacaactctaaggtgacagctgaggctgagggtgtggtgtcgaaggcg
aatctacaggttcaagaagcacaagtgctgttcaccaagaagttggaagcatcgataggt
gaggaacatggagaagctacgttggaggtggaagtgagcctggagtcaggagaggtgcag
tggatgcgacagggtgtggttatccagtctagtccaaaattcacactgaatgcaagcggc
aagaagcgcagcctcaccgttcacaacctcagcatctctgatcgtggcacgtacagatgt
gagaccttgcatgacagaacacagggcaagctgatggtggagcccaggaagatctcagtc
cttaaaggtctagctgacacagacacttttgaaagggaaaccgcgacatttgaagttgag
ctgtcccatgtggatgtggagggggtctggcagaaggatggaatccgtgtaaaacctcac
aataactggcgggttagcacaaatggaaaagtgcatagcctgaccctttcaaatctaaca
attgaagacagtggtacggtcacgttcagtggagaaaacataaagacatctgcaagactc
ctagtgaaagagctacctgtgatattcataaagcaaatggaggatcttaggattcctgac
acctccagtgcattgtttgaatgtgaactgtccagacacacagcccaggtgaagtggtta
aaggattcagaaatcataaaaccaaaaaaaaactaccgaatctattccatggggagaaag
aggtttcttcagattataaactgcacactcgaagattcggggacttacacctgtgatgca
ggagactgtaatgcatcggctgtattggaagtttatgagcgagaggtgcagattgtacaa
ggtctcaaagatgttgtaattcaagaagatgagaatgctgtgtttgtttgcgaaatctca
gtggagaatataaagggagaatggtttaaaaatggggagaaaatcaagccaaccagtact
accaaaattcgccatgaaggaacaaagcattttcttcttatttgtaatgtaaagccggag
gattccggtgagattagatttgttgcaaaagaaacagagtcttcagcttgcctggaggtt
gaagagctgccagttcactttgtaaaaccactgcgggataaaacagccctagagaagcat
cgtgtgatcctggagtgcacagtgtccaacccacggtcttgtgtgcgctggtatcgagga
gacaatctcatcttaccttctgatcactatgaaatctgtagtgaaggctgttatcgtaaa
cttgtcattcatcaggtgacatccatggatgaaggaacatactccgtccaagcaggagag
caccagtgctctgcacggctgatggtagaagaacaagcgatcttggtggtgaggcagcta
gctgacgtagaggtcaccgccccagagacggcctgtttcgagtgcgaggtgtctgtcccc
gtcatcaagcctccccagtggagtctcaatgggcagcttttgcagaatggaaatggtgtg
cgcatcgagagcttgggcaccattcacaggcttgtattgaaagaaacctcttccgatatg
tctggcctggtcaaattcactgcaggaaaagccagaagtagcgcaagactcaacgtaaag
agctga
DBGET
integrated database retrieval system
