Polypterus senegalus (gray bichir): 120531234
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Entry
120531234 CDS
T08668
Symbol
ttll4
Name
(RefSeq) tubulin polyglutamylase TTLL4 isoform X1
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psex03037
]
120531234 (ttll4)
04812 Cytoskeleton proteins [BR:
psex04812
]
120531234 (ttll4)
Enzymes [BR:
psex01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
120531234 (ttll4)
Cilium and associated proteins [BR:
psex03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
120531234 (ttll4)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
120531234 (ttll4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
HI0933_like
Motif
Other DBs
NCBI-GeneID:
120531234
NCBI-ProteinID:
XP_039612393
LinkDB
All DBs
Position
6:85583373..85652795
Genome browser
AA seq
1093 aa
AA seq
DB search
MASSGLDRSKLSTTSKSNGDASTDAPLTKRSNQFSLRSLEKRFRCTVHPLPPLNYRHGTP
NNVRVLPDRIHVFSGISSHPNYLTNKSTLNGNVASSSQLVTKAAQNSVESSPLFENLCLF
EQAIHRCGPSWRVENLRCGSKILGKRAFSSPQQTLSHSCSASLKGSLTVHSSSTRVTSSC
SQTSRPAVKRNVFMRPTSAKVPHYTTPERNSMWARSSTAVSHCYEIKGNSDGSIRKNEPL
PLFSQSLHFHPDSLQTSLSSKEHEKNGNEILGGLPWQASNMEINPKVSESEKKAWWPEAG
DGPEIMLTEAVRRLAGSGSPKKTGRLNEISGRVQGNIENPIGKWYIQDSPTKGTNKRKIE
SEGLHSLSWGELNCQSATEISKACLTNGDLCNGFAQTNMLSIPGYATEIFSQQSIECSID
VTSRNLQSVQQCDTNMTVVDLEPVSVTSVTTQISAIHLHVGHEASVPETKEDDSAVEGCG
NSPTSQDLSSQLQDCFDDEEELPSSLENECSDDDDSDQSDCSLTDVSSSASSMVVPRNYS
KESVQINTEEKIVKPALVPSLFSNMPSTIYFSTADEIVEVLPSEQRKLLKWKMSTVTPNV
VKLTIARSHFKVTKKSHDWLGCWGHHMKSPGFKVIREYQKLNHFPGSFQIGRKDRLWRNL
SKMQARFGKKEFNFFPQSFVLPQDIKLLKKSWEENGSKQKWIVKPPASARGIGIQVIHKW
SQLPKRRPLLVQKYLHKPYLISGSKFDLRIYVYVTSYDPLRIYMFTDGLVRFASCKYSSS
MKSLSNKFMHLTNYSVNKKNSEYKSNSDESACQGHKWALKALWNYLSQKGVNTDAIWEKI
KDMVIKTIIASDPYVNSLLKMHVRHPYCCHELFGFDIMLDENLKPWVLEVNISPSLHSNS
PLDIKIKGQMIRDLLNLAGFLLPQKEDLSLATHSGGSTSSLSGSVKEKYRHFSELSSDDK
MKRAYYLSQRFADEEFLSSILDVLTPEDIRNLCETEDEYYRRGDFQRVFPSSCSARYLRF
FEQPRYLNILLNQWEQKYYMDKDKGIELLKVFCQKGVHLGDRCDPSHVLQYYWKKANTDF
KMVTKDARIQMLG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagtggacttgaccgctcaaagttgagcactacctctaaatcgaatggtgat
gccagtacagatgcgcctttgactaaacgctctaatcagttctctttgcgctcgctggag
aagaggtttagatgtactgtacaccctctgccacccctgaactatcgccatggaacacct
aataatgtgagagttcttccagatcggatccatgtattctcaggaatttcttcacaccca
aactacctcacaaataaaagcacattaaatggcaatgttgccagtagttcacaattagtt
acaaaggctgcacaaaattccgttgagtcttcaccactttttgaaaacctctgccttttt
gaacaggcaatccatcgctgtgggccttcctggcgtgtggagaatctcaggtgtggatct
aaaattttggggaagagggcattttcctcaccccagcaaactctttcacatagctgttct
gcatctctcaagggaagtcttactgtgcattccagtagcacgcgagttacttcctcgtgt
tctcagacaagtaggcctgcagttaagaggaatgtcttcatgagacctaccagtgcaaaa
gtgcctcactacaccactccagaaagaaacagtatgtgggctcggtcttctactgcagtt
tcgcactgttatgaaattaagggaaacagtgatggaagcataagaaaaaatgagcctctt
ccattatttagtcaatcattgcatttccatccagactcattacagacaagtctttcctca
aaagagcatgaaaaaaatgggaatgaaattcttgggggtcttccctggcaagcttccaac
atggaaattaatcctaaagtttctgaatcagagaagaaagcctggtggcctgaggctggt
gatggtcctgaaatcatgttgactgaagcagttagaaggctggcaggaagtggctctccg
aagaaaactggaaggctgaatgaaattagtggtagggttcaagggaacatagaaaatcct
attggaaaatggtacatacaagacagtccaacaaaaggcactaacaaaaggaagattgaa
tcagaagggttgcattctttgtcttggggagagctgaactgtcagtcagctactgagata
agtaaagcttgccttacaaatggtgacttatgcaatggttttgcacagactaatatgctg
agcattccaggttatgctactgaaatattttcgcaacaaagtattgaatgtagcatagat
gtgacctcaaggaatctccaaagtgtacagcagtgtgacacaaatatgacagtggttgac
ttggagccagtgtccgtcacttccgtaactacacagatctctgcaatacatctgcatgtg
ggtcatgaggcgtctgttcctgagactaaggaagatgattctgctgtagaaggatgtggc
aactctccaacatctcaagatctcagcagccagcttcaggattgttttgatgacgaagaa
gaacttccaagtagccttgaaaatgaatgcagtgatgatgatgatagtgatcagtcagat
tgttctttaacagatgtatcctcctctgcatcctcaatggttgtaccaaggaactacagt
aaagagtctgtccaaataaacacagaggaaaaaattgtgaagcctgctttagtgccaagc
ttattttccaatatgccttctaccatctatttcagcacagcagatgaaatagttgaagtg
ctgccatcagaacagaggaagctgctgaagtggaagatgagtacagttactccaaatgta
gtgaaactgaccatagcaagatcacactttaaagtgactaaaaaaagccatgattggtta
ggctgttggggtcatcacatgaagtctccaggatttaaggtcatcagggagtaccagaag
ttaaatcattttccaggttcctttcaaattgggcggaaagatcgtttgtggcgtaacctt
tccaagatgcaggcacgttttggaaaaaaagaattcaacttcttcccacaatcctttgta
ttgccacaggatataaagctgcttaaaaagtcgtgggaggaaaatggtagcaaacaaaaa
tggattgtgaaaccacctgcatctgccagaggaatagggatccaggtaattcacaaatgg
agtcagctaccaaaaaggagaccccttttagtacagaaatatcttcataaaccctacctc
atcagtggaagcaaatttgatttaaggatatatgtttatgtgacgtcttatgatccactt
cgaatctacatgtttacagatggcttggtccgttttgcaagttgcaagtattcctcttca
atgaagagtctgagcaacaagtttatgcacttaactaactatagtgtgaacaaaaaaaat
tctgagtacaagtccaacagtgatgagagtgcctgtcaaggtcacaaatgggctttgaaa
gcactgtggaactacttgagccaaaaaggagtcaacactgatgcaatatgggaaaaaatt
aaggacatggtgataaaaactattatcgcgtcagatccttatgtaaacagcttgcttaag
atgcatgtgcgtcatccatattgctgccatgaactttttgggtttgacatcatgttagat
gaaaatcttaagccctgggtcttggaggttaacatatctcccagccttcactccaattcg
ccattggacataaagataaaggggcagatgatcagagatttgttaaaccttgcaggattt
ttgctacctcagaaagaagatttgagtttggcaactcattcaggtggctcaacaagcagc
ttatctggaagtgtaaaagagaaatacaggcatttttctgaactttcatcagatgacaaa
atgaagagagcttactacttaagccagagatttgcagatgaggagttcttatctagtatc
ctagatgttttaactcctgaagatattcggaatctttgtgaaactgaagatgagtattac
cggagaggtgattttcaacgtgtttttccttcatcttgttctgctcgttatctcagattt
tttgaacagccacgatacctaaatattcttttgaaccaatgggaacagaaatactatatg
gataaagacaaaggtattgaactattgaaagttttctgtcaaaaaggagttcacttggga
gatagatgtgacccttcgcatgtgttacaatactattggaagaaggcaaatactgatttc
aagatggtgacaaaagatgctcggatacagatgctcggatga
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