Polypterus senegalus (gray bichir): 120531243
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Entry
120531243 CDS
T08668
Symbol
lss
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00100
Steroid biosynthesis
psex01100
Metabolic pathways
Module
psex_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120531243 (lss)
Enzymes [BR:
psex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
120531243 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
120531243
NCBI-ProteinID:
XP_039612412
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Position
6:complement(86570770..86622518)
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AA seq
764 aa
AA seq
DB search
MTEGTYLRRRGGPYKTKPATDLRHWRLSNVEGRQCWTFEDDRASAQREQTLLEVHCLGSD
NLARALKGYLDLCRKSNAGFWIREADVLNAEKTFPNYQPASNAQEAALNGMMFYSIIQAE
DGHWTGDYGGPLFLLPGLLITCHVAKIPLPEAWKAEMVRYLRSVQLPDGGWGLHIEDKST
VFGTALNYTALRILGVEPDDPDLIHARSNLHKKGGAVGIPSWGKFWLAILNVYSWDGMNT
LFPEMWLFPPWMPAHPSTLWCHCRQVYLPMSYCYAVRLTAEEDELILSLRQELYIQDYST
VDWPSQRNNIAPCDIYTPHSGLLSLAYIILNIYEKYHSTSLRKKAIDELYEHIKADDRFT
KCISIGPISKTINMLVRWYADGPTSPIFQEHISRISDYLWMGLDGMKMQGTNGSQLWDTA
FAVQAFLEAGAQDKSEFVDTLKHAHEFLRISQIPENPPNYVKYYRQMNKGGFPFSTRDCG
WIVADCTAEGLKSVMLLQEKCPFITNHISQERLYDAVNVLLNMRNSDGGFATYETKRGGR
LLELLNPSEVFGDIMIDYTYVECTSAVVQALRHFQEKFPQHRTQEIKNTLQRGLEYCRNS
QRNDGSWEGSWGVCFTYGTWFGLEAFACMGHIYQNGSACQEVMAACDFLLSKQMEDGGWG
EDFESCEQRKYIQSDQSQIHSTCWALLGLMAVRYPYVHVIEQGIQLLIKRQQPNGDWPQE
NIAGVFNKSCAISYTSYRNVFPIWTLGRFAQHYPSSSLAGKCKV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaggaacttatttaagaaggcgaggtggcccctataaaaccaagccagccaca
gacctgaggcactggaggctttccaatgttgaagggaggcagtgctggacctttgaggat
gaccgggcctctgcacagcgagaacagactttgttggaagtgcactgtttgggaagcgat
aatttagcgagagcactcaaaggctacttagacttgtgcagaaaatcaaatgcaggcttc
tggatacgtgaggcagatgtcctaaatgctgagaagacatttccaaattatcaacctgct
agtaatgcacaagaagcagccctcaatggcatgatgttttacagtatcatacaagccgaa
gatggacactggactggagactacggaggtccactctttttacttccaggtctactgatt
acctgccatgttgcgaagattccactgcctgaagcctggaaggctgagatggtacgctat
ctgcgttctgtccaactcccggatggaggctggggcctgcatattgaagacaagtccaca
gtgtttggcacagccttaaattacactgctctgaggattttaggagttgagcctgatgat
cctgaccttatacatgcccgatccaatcttcacaagaaaggaggagctgttggaattcct
tcatggggtaaattttggctggcaatcctgaatgtttatagttgggatggaatgaacact
cttttcccagaaatgtggctgttccctccctggatgccagcacatccctcaaccctatgg
tgccactgcagacaggtctaccttcccatgagttactgctatgctgtacgacttacagct
gaagaggatgagcttatccttagcttgagacaggagctgtatattcaagactactcaacc
gtcgattggccgtcacagagaaataatattgctccttgtgacatatatactcctcacagt
ggactgctgtcattggcttacatcattctcaacatatatgagaaatatcacagcacatcg
ctaaggaaaaaggctattgatgaactttatgagcatatcaaggctgatgacagattcacc
aaatgcatcagcattgggccgatttccaaaacaattaacatgttagtacgctggtatgca
gatggtcccacatctcctatatttcaggagcacatctctagaatctctgactatctgtgg
atgggccttgatggcatgaaaatgcagggaaccaatggctctcagctctgggataccgcc
tttgctgtacaagcttttcttgaggcaggagctcaggacaaatccgaatttgtagatact
ctcaaacatgcccatgagttcttaagaatttcccagatacctgaaaatccaccaaattat
gtaaagtattatcgtcaaatgaataagggaggctttccctttagcacccgggactgtggg
tggattgttgctgactgcacagctgaagggctgaaatctgtgatgctgcttcaggaaaaa
tgccctttcatcacaaaccacatatctcaggaacggttgtatgatgctgtcaatgtgctg
ctaaacatgagaaactctgatggtggttttgctacttatgagactaaacggggtggcaga
ctattggagcttttaaatccatcagaagtgtttggtgacattatgatagactacacgtat
gtcgaatgcacatctgcagtggtgcaggctctccggcactttcaagagaagttccctcaa
cacagaacacaagaaatcaagaacacattgcaaaggggtctggagtactgcagaaactca
caaagaaatgatggctcatgggaagggagttggggagtatgctttacatatggaacctgg
tttggtctagaagcatttgcttgcatgggtcacatctatcagaatggttctgcctgtcag
gaagtcatggctgcatgtgatttcctgctatctaaacaaatggaggatggtggatggggg
gaagactttgaatcttgtgaacagagaaaatatattcaaagtgaccagtctcagatacac
agtacctgttgggcacttctggggctaatggctgtcagatacccttatgttcatgtgata
gagcaaggaatacaacttttgataaaaagacaacaacctaatggtgactggcctcaggag
aatattgctggtgtattcaacaagagttgtgctatcagctacacctcctatcgcaatgtg
tttcccatctggactctaggacgttttgctcagcactatccttccagctctttggctgga
aaatgcaaagtgtga
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