Polypterus senegalus (gray bichir): 120531291
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Entry
120531291 CDS
T08668
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120531291 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120531291 (rabgef1)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120531291 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
120531291 (rabgef1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PRESAN
Phage_int_SAM_4
Mucin
Motif
Other DBs
NCBI-GeneID:
120531291
NCBI-ProteinID:
XP_039612490
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Position
6:95026301..95119025
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AA seq
491 aa
AA seq
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MSQKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYQRARQKQIQEDWALAER
LQREEEAAYASSQGAQTQPTLAPFSKFEDKKTNVTTRKVTTVKKFFSPSSRAAPKKETQE
AKAPSPSISRQSSVETDKVSRDFIDFLKNLQKPGRDIHKQCRIFLETMANKKEVSAEEQS
EYVQDFYQNVAEKLQVHFKGSSERVERVMDQVEKYIMTRLYKSVFCPETTDDEKKDLAVQ
KRIRALHWVTLQMLCVPVNEDIPEVSDILVKAITDIIEMDSKRVPRDKLACITKCSKHIF
NAIKITKKEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSPEDFERYMSGQASPRRQDQDGYPSHVNNSPSLGQAYQNLERL
SGLGERQERVLEGARRLERDLIEWSDGVAREVQDILDKYPLEICHPASAIDSDNVENDRL
PPPLQPQVFAG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaatcagagcgcagagggattcatgtggaccagtctgaactgctttgcaag
aaaggatgtgggtactacgggaatcctgcctggcaaggtttctgttcaaaatgttggcgt
gaagagtaccagcgtgctcggcagaagcagattcaggaggactgggcacttgccgaaaga
ctgcaaagagaggaggaagcagcctatgccagcagtcagggagcacagactcagccaacc
cttgcccctttttcaaaatttgaagacaagaagacaaatgtaacaactcgtaaagtgact
acagtcaagaagtttttcagcccctcatcgcgagctgcccccaaaaaagagacccaggag
gcaaaagcgccaagtccatctatcagtcgacagtccagtgtggaaacagacaaggtttct
cgtgactttattgacttcctgaaaaacctgcaaaagcctggccgggacatacataagcag
tgtcgtattttccttgaaacaatggctaataagaaggaagtgagtgcagaagagcaatct
gagtatgtacaagatttctatcagaatgtggcagagaagcttcaggtgcattttaaaggt
tcttcagaacgtgtggaacgggttatggatcaagttgaaaaatacatcatgacacgtctg
tacaaaagtgtgttctgccctgaaaccacagatgatgaaaagaaagatctggcagtgcag
aaacgcatcagggctctgcactgggttacgctgcagatgttgtgtgtgccagtcaatgaa
gatattcctgaagtatcagatattttggtgaaggctattacagatataattgagatggac
tcgaagcgtgtgcccagagacaagctggcctgcatcacaaagtgcagcaagcacatcttc
aatgccatcaagatcacaaagaaggaacccgcctcagccgatgactttctaccaaccctt
atctatatagtgctgaaggcaaaccctcctcgcctgcagtccaacattcaatatatcaca
agattttgcaacccaagtcgactcatgacaggagaagatggttactacttcacaaacctg
tgttgtgctgttgccttcatcgagaaactggatgcccagtccctcaatctgagccctgag
gattttgaacgctacatgtctggacaggcatcaccacgcaggcaggaccaagatggctac
ccgagtcatgtgaacaacagtccaagtttgggtcaggcttaccagaaccttgagcggctc
tctgggttgggcgaacgacaagagcgagtgctagagggggcacgccggcttgaaagagac
cttatcgaatggagtgatggagtggctagggaagtgcaagacattctggacaagtaccct
ctggaaatctgtcacccagcatcagccattgactctgataatgtggagaatgatcgattg
ccaccccctctccaacctcaggtcttcgctggctag
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