Polypterus senegalus (gray bichir): 120531414
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Entry
120531414 CDS
T08668
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120531414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120531414
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120531414
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120531414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-RING_Vps41
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120531414
NCBI-ProteinID:
XP_039612747
LinkDB
All DBs
Position
6:113492360..113917399
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AA seq
798 aa
AA seq
DB search
MTGPQRPLAGLWPWLLMAALQVVLGQTGLELAAAESERSPQKAVLKVTLLRAERAGESLT
LEGVFAGASETGPAQGQLMQSHPLSLCNTSDDEQQEHLFISFVKLESQDRDPHPCLTLLK
KARLALHRGAQAVIFDITDDASAADQLRETDDLLQKPVVLVQAKNAATLMELVNNNQEAM
VKIEPKKEPDNWAHNDVVILFTVVSTVLIIILVFACRLKCKANPNQDSINQQTVRAISRL
ETRIYRSPCRARNQRSKSNWDSASSSNSTPVCAICLEEFIDGQDLRVISCCHEFHKECVD
PWLLQQRTCPLCMYNIMEAESPPVPMVDGMQASRSQRILFFQQYPSHARLHQHSTAIPMQ
PYPRTPTGPGAQAVHYYVTPPMEPNAVRCMSSRPTRAPLQRCPYQPIESLQPRQHRTVYL
RPPSHLEQYYQHRPCFGQNRSAYPAPRSTFKPRNHSIPARSGGHSRQDDGSCSGGSYRTE
RSGYLADGPGSDSSSGPCHGSSSDSVLNCTDISLQGVYGSWSTFRSSLSSDYDPFVFCGQ
GRSDRETGGGGDGGGGGIEQGARPRSLDSIVNWTGLCPEEQVFSHVHYHRHRHHHYGQGC
QKSHLGHGPARNSDGELCAAITSADCWQARPLEAHHCPPANSSPVQCPAPSLVQCPPAAA
NQIDSSVKRLEQGNRPTVESCQDTSTSLLNSYGVNSRHHWRKQSLDPEKSMHFHEGADVH
EDCSIHIHYGHDSGYCCSADIQPVAPVPLVLDSTAGPHFTWQQQQQQQPLSESAASGNQQ
RELRNGGLEGQAPTENYL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtccgcagcggccactggccgggctctggccgtggctgctaatggcggccctt
caggtagtgctcgggcagaccgggctggagctggcggctgccgagtcggaacgctccccg
cagaaggctgtcctcaaggtgacactgctgagagctgagcgggcgggggagtcgctcacc
ttggagggggtgttcgcgggggccagcgagacgggtccagcccaaggccagctcatgcag
tcccatccattgtccctgtgcaacacgagtgatgatgagcagcaagagcacttgtttatc
agctttgtcaagctggagagtcaagacagagacccacatccttgcctcactctccttaaa
aaggctcggctggcattgcaccgcggggctcaggcggtcatttttgacatcactgatgat
gcaagtgcagctgaccagcttcgtgagactgatgaccttttacagaagccagtggtactg
gtccaagctaagaatgctgccaccttgatggagcttgttaacaacaaccaggaagccatg
gtgaaaattgagccaaagaaggagccagacaactgggcacacaacgatgttgtaattctg
ttcactgtagtttcaactgtcttgattatcattctggtctttgcctgtcgtttaaagtgt
aaagcaaatccaaatcaggattctattaatcaacaaactgtccgtgcgatcagccgcctg
gaaactcgcatatataggtcaccatgccgtgcaagaaatcagcgatccaagagcaactgg
gattctgcaagcagcagtaactccacgcctgtttgtgccatctgcttggaggagttcatt
gatggacaagacctgagagtcatttcatgctgtcatgaattccataaggagtgtgtggac
ccatggctgctacaacaacgtacatgtccactttgcatgtacaatattatggaagcagag
tcacctcctgtccctatggttgatgggatgcaggcaagccgtagccagaggattctgttt
ttccagcaatatcccagtcatgctcgattacaccaacattcaactgccattcccatgcaa
ccctatcccagaactccaacaggaccaggtgctcaagcagtccactactacgttactcct
cctatggagcccaacgctgtaaggtgcatgtctagtcggcctacccgagcaccactgcag
cggtgtccttatcagcccatagaaagtctgcagcctaggcagcaccgaactgtatacctg
aggcccccatcacatttggagcagtattaccagcatagaccttgctttggccagaacaga
tctgcttatccagctccacgaagcactttcaaaccccgaaaccacagcattcctgcaaga
agtggaggacacagtcgacaagatgatggaagctgttcagggggtagctaccgaacagaa
agaagtggctacctggccgatgggcccggaagtgattctagctcagggccttgccatggc
tcatcgagtgattctgttcttaactgcacagatatcagcctccagggtgtctatgggagc
tggtcaacatttcgtagctctttgagcagtgattatgatccatttgttttctgtggtcaa
ggacgatcagatagggaaacagggggaggtggagatggtggcggtggaggaattgagcaa
ggagcaagaccaagatccttggattccatagttaactggacaggcctttgccctgaggaa
caagtattcagtcacgttcattaccacaggcatcggcaccatcactatgggcagggatgt
caaaagagccaccttggtcatggaccagcgaggaactctgacggagagctgtgtgctgca
attacttctgctgactgttggcaagccaggcctcttgaagctcaccactgcccaccagca
aatagctctcctgttcagtgccctgcaccatctttggtgcagtgtccaccagcagcagcc
aaccagatagactcttcagtaaaaagacttgaacaaggtaacagaccgacagtagaaagc
tgtcaagatactagcacgtccttgttgaacagctatggtgtcaatagtagacaccattgg
agaaaacagagcctcgatccagaaaaatctatgcatttccacgaaggtgcagatgtgcat
gaagactgtagcatccacattcactatggccatgactctggctattgctgttctgcagac
attcagcccgtggcaccggtaccactggtattggactctactgcaggaccccattttacg
tggcagcagcaacaacaacaacagcctttgtcagaatctgcagcgtcgggtaaccagcaa
agagaactcagaaatggaggattggaaggccaggcacccacagagaattatttgtaa
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