Polypterus senegalus (gray bichir): 120531429
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Entry
120531429 CDS
T08668
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120531429 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120531429 (trpv1)
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120531429 (trpv1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
CCDC138_C
Motif
Other DBs
NCBI-GeneID:
120531429
NCBI-ProteinID:
XP_039612777
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Position
6:complement(115288676..115378362)
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AA seq
779 aa
AA seq
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MDQPETTEQFSFTLETEDSPFDPQVTKSPRSKPRKKFASGFGSDDTKAPMDTCYQDEYEE
SAPMVKFNLDFDRKPGSSSSDSTGAAKFDLKTLFDAVASGDVSRLDGLQNYLRKTLKQLT
HSEFKDPVNGKTCLLKALLNLKDGQNDTIDVLLDIAEKGGYLKDFVNAAYTDSYYKGQSA
LHVAIERRNRHYVEMLVQKGADVNARASGKFFQLNEGNGFYFGELPLALAACTNQMDIVK
FLMKNPYEKAKVDATDSIGNTVLHALVTVADNTSVNTKFVTIMYDEILRKGNQLYPKIKL
ESITNNRKLTPLKLAAKTGKLEIFKHIIGREFPEKDCRHLSRKFTEWVYGPVHSCLYDID
SIDSYEKNSVLEILVYGSEIPNRHELLCIEPLNKVLEDKWKKFVSKIFFTNFFFYLIYLI
TFTMIAYYRKEGKPPFHIEKTPMEYLRLAGQLISLAGAVYFFIKGIKDLLKKRTTWQGLI
IDGYYEILFFLQALFFLTATVLYFLGKEEYVACLVLSLALAWVDVLYYTRGFKHLGIYSV
MIQKMILRDMMRFLIVYMVFLIGFSASLVTLIEDSPAKAFVGNGEDSCHNKSYNSIYFTT
QELFKFTIGMGDLEFTEQFNFKHLFYFLLICYIILTYILLLNMLIALMSETVDKISKESK
GIWKLQRAIMIFDLEKSLPRYLKSKLRSGITKDLGSSANEDIRRCFRVETVNWNQWNSNL
GIINEEPGNHDINRTGSPHIGYQRGQSWRNMVPLARELINRQPPTTNEEEMQTFNTTSI
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggatcagccagagactactgagcaattcagctttaccctcgagaccgaagactcccca
tttgaccctcaggtcaccaaaagccccaggagcaagccacgaaaaaagtttgcttctggt
tttgggagtgatgacacaaaggcacccatggatacctgctaccaggatgagtatgaagag
tcagctcctatggtgaaatttaacttggactttgacagaaaacctggaagttctagctct
gacagcacaggagcagcaaaatttgacttgaaaacactatttgatgctgtcgcaagtggt
gatgtgtcccgattggatgggttgcaaaattacctgagaaaaaccttgaaacagctgacc
cattcagaatttaaagatcctgtaaatggtaaaacttgtttactgaaggcacttctaaat
ttaaaagatgggcagaatgatacgattgatgtgctcctggacattgcagaaaaaggaggt
tacctaaaggattttgttaatgctgcatacactgacagttattacaaaggacaatctgcc
cttcatgttgctattgaaagaagaaatagacactatgtcgagatgcttgtccagaaggga
gcagacgtaaatgcaagagccagtgggaagttctttcagttaaatgaaggaaatggattc
tattttggtgagctccccttggcactggctgcctgcaccaaccagatggacattgtgaaa
tttcttatgaagaacccctacgagaaagctaaggttgatgccaccgactccattggaaat
acagtgctgcatgctctggtcacagtagctgacaacacgtcggtcaacaccaagtttgtc
accataatgtatgatgagatactgcggaaagggaatcaactttatccaaaaatcaagctg
gagagcatcacaaacaatcgcaagctcacccctttgaaactggcagcaaagacaggcaag
ctggagatttttaagcacattattggacgagaatttccagaaaaagactgcagacacctg
tcccggaagtttacagaatgggtttatggcccagtacattcctgcctctacgacatcgac
tccattgattcttatgagaaaaactctgttttggaaatccttgtatatggcagtgaaatc
ccgaatcggcatgagctgctgtgcatagaaccactgaataaagtgctggaagacaaatgg
aaaaaatttgtcagcaaaattttcttcacaaatttttttttctacctgatatacctgatc
acattcaccatgattgcctattacagaaaggaggggaagcccccttttcacatcgagaag
acaccaatggagtacctacgtttagctggacagctcatcagtctggcaggagctgtatac
ttctttattaaagggattaaagatttgctgaaaaaacggaccacctggcaaggtttaata
attgatggctactatgaaatcctttttttcctgcaggccttatttttcttgactgccaca
gtgctctactttttaggaaaagaggaatacgtggcctgcctcgtcctgtccctggctctt
gcttgggttgatgtcctttattatactcggggcttcaagcacctaggaatctacagtgtt
atgatacaaaagatgatcttgagagatatgatgcgcttcctgatcgtttacatggtgttc
ctcattggcttttcagcatcattggtgactttaattgaagactccccagctaaagcattt
gtggggaatggtgaggattcctgccacaacaaatcatacaacagcatatatttcactacc
caggagttgttcaagtttacaattggaatgggtgacttggaattcaccgagcagttcaac
ttcaagcacctcttctactttttgctcatttgctatatcattctcacctatatactcctc
ctgaacatgttaattgctcttatgagtgaaactgtggacaagatttcaaaggaaagcaaa
ggcatttggaaactccagagagccattatgatttttgacctggagaaaagcctgcccagg
tatctaaagtcaaagctgaggtctggcatcacaaaggacctgggtagttcagccaatgag
gacatacggagatgtttcagagtcgaaacagtcaactggaaccaatggaactctaatctt
ggcatcatcaatgaagaaccaggcaaccacgacataaacagaacaggaagtccacacatt
ggatatcaaagaggacaaagttggaggaacatggtgcctttggcaagagagctgatcaac
aggcagccaccaactaccaatgaggaagagatgcagacctttaacacaacatccatctaa
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