Polypterus senegalus (gray bichir): 120531452
Help
Entry
120531452 CDS
T08668
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120531452 (nsun5)
Enzymes [BR:
psex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
120531452 (nsun5)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Other ribosome biogenesis factors
120531452 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
120531452
NCBI-ProteinID:
XP_039612811
LinkDB
All DBs
Position
6:116507655..116517773
Genome browser
AA seq
457 aa
AA seq
DB search
MSVYAKAADILERLERNEAAVKTLVYNSGFRNIKQLYALVCNTLKYSDVLEEVISGTSLV
KEKKVKVNIVKVLVYDHLFGRGLKCGGGWKNLIMKHHVRLQASLAKLKVKRKVCQNEDLL
QKSVSENQGRPLPRYARVNTLKTTVEDAIDYLKRDGFTYQGQAKSLEDLGLLSGKNFCSD
LHLPDLLVFPSNTDLHAHFLYQAGHIILQDKASCLPAYLLRPPPGAHVIDACAAPGNKTS
HLAALMSNRGKLFAFDLDPKRLSTMSTLLLRAGVTCQELAHVDFLKVNPEDPKYSQVEYI
LLDPSCSGSGIVGRLNELTDTPASSSEERLQALARFQQLCLAHALRFPCLKRLVYSTCSL
HSQENEDVVAACMQQHEKSFRLVALLPEWPERGRAPLTQCLRASQSKMLTNGFFVAMLEK
KDSEEKAQPHELISSPASAEKRKVATGNAVSKKRRRK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtacgcgaaagccgcggatattctggaaagactggagaggaatgaggcagcg
gtgaagacgctcgtatacaacagtggatttcggaacatcaaacagctgtatgccttagtc
tgcaacacgcttaaatattctgatgttcttgaagaggtcatctctggcaccagtctggtg
aaagaaaaaaaggtcaaagtgaacattgtcaaggtgctggtatatgatcacctatttggc
cggggacttaaatgcgggggtggatggaaaaatctgattatgaagcaccatgtgagattg
caagcatcacttgcaaagcttaaagttaaaaggaaggtctgccaaaatgaagatctcctt
caaaaatcagttagtgaaaatcaaggtaggcctctgccacgttacgcccgtgtcaacact
ctcaaaacaactgtagaagatgcaattgactacctgaaacgagatggctttacctatcaa
gggcaggctaaaagcctggaagaccttgggctactatctggaaagaacttctgttcagat
ttgcaccttccagatctccttgtgttcccaagtaacacagatcttcacgctcacttcctg
taccaagctggccacatcatacttcaagacaaggccagttgccttccagcatacctctta
cgcccgccccctggggcccatgtgattgatgcctgtgccgctcctgggaacaagactagt
catctggctgctcttatgagtaatcgtgggaagctatttgcctttgaccttgatcccaaa
cgactgtctactatgagcacgctcttgcttagggcaggagttacatgtcaggagctggct
catgtggattttctaaaggtcaatccagaggaccccaagtatagtcaagtggaatatatt
ctccttgacccatcatgtagtgggtcaggtattgtaggtcgattgaatgagcttactgat
acccctgcttcatcttcagaggagcgtttgcaagcccttgcgaggttccagcagctgtgc
ctggcacatgctcttcgcttcccttgtttaaaacgtctggtttactcaacatgctcattg
cattctcaagagaatgaggatgttgtagccgcatgtatgcaacagcatgaaaaaagcttc
aggcttgtggcattgctcccagaatggccggaaaggggccgtgctccactaacacaatgt
ctaagagcaagccaaagcaaaatgctcaccaatggcttttttgtggccatgctggaaaag
aaggattctgaagagaaagcgcagcctcatgaactaatctcttctccggcttcggcggaa
aaaaggaaggtggctactggtaacgctgtctccaagaagaggagaaggaaatag
DBGET
integrated database retrieval system
