Polypterus senegalus (gray bichir): 120531478
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Entry
120531478 CDS
T08668
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120531478 (vps53)
Membrane trafficking [BR:
psex04131
]
Protein recycling
Others
EARP complex
120531478 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
120531478 (vps53)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
FBF1
GrpE
COG3_N
Syndetin_C
Tropomyosin
hAT-like_RNase-H
COG4_N
CREPT
Laminin_II
FUSC
MCPsignal
Med11
Sec8_N
Motif
Other DBs
NCBI-GeneID:
120531478
NCBI-ProteinID:
XP_039612848
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All DBs
Position
6:complement(117990832..118029464)
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AA seq
829 aa
AA seq
DB search
MEEEELEFVDELEAVLHLSPEVQQAIEQVFPSQDPLDRADFNAVEYINSLFPTEQSLANI
DDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIRQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITSLNHLHMLVGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFQKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGSKRPGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGHMFPSEWFMTERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGSTLGDSPGKKPELPPASTNPFLDDENGNEEPAEKEEDIDKPRKPKAQDNPFHGIISK
CFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKSNTEDGGAVLPSCADLFVYYKKCMV
QCSQLSTGEPMIALSTIFQKYLREYAWKILSGNLPKTTSNSGGLTISSLLKEKEGSEVAK
FTHDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLMERINLTGEMDTFSTVISNSIQ
LLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRKYF
TQFCIKFANSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAPA
SYTKIVVKGMTRAEMILKVVMAPHEPPVIFVDNYIKLLADGNPETFQKILDMKGLKRSEQ
SSMLDLFRQRLPTPPSGGDGMPSLSFSTPTPEQESSRIRKLEKLIKKRL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggaattagaatttgtggatgagttggaagcagtgttacacttgtcgccc
gaagttcagcaagcaatagaacaggtttttccaagtcaggatccattagacagagcagac
ttcaatgcagtggagtacatcaactccctttttcccactgaacaatccctggcaaatatt
gatgatgttgttaacaaaatacggttaaaaataaggcggttagacgacaatatcaggaca
gttgtgagaggacaaacaaatgtgggtcaagatgggagacaggcccttgaagaagcacag
aaagcgattagacagctctttggaaaaattaaagatattaaagataaagcggagaaatct
gaacaaatggttaaggaaatcacccgtgatatcaagcagctggaccatgctaagcggcac
ttgaccacatctatcacatctctgaatcatctgcacatgctagttggtggtgttgactca
ctagaggcaatgactcgacggcgccagtatggagaagttgcaaatcttctccagggggtg
gtaaatgtgttggagcacttccagaaatacatgggaattcctcagattcgtcagctctct
gaaagagtgaaagcagcccaaacagaactgggacagcagattttagcagactttgaggaa
gcttttccatcccaaggatcaaagagacctggaggccccagcaatgtcttacgagatgct
tgtcttgtagcaaatgtccttgacccaaggatcaaacaggaaattattaagaagttcata
aaacaacacctctcagaatatcttgttttgtttcaagaaaaccaagatgtggcttggttg
gacaaaattgatcgtcgttatgcttggatcaagaggcagcttgtggattatgaagaaaag
tatggccatatgttcccatctgagtggttcatgactgagcgaattgcagtggagttctgc
cacataaccaggacagaacttgccaagattatgcgaacaagggccaaggagattgaagtg
aagctgctactttttgcaatccagaggacaactaactttgaagggctgctggccaagcgc
ttctccggaagcactctgggtgatagtcctgggaagaagcctgagctgccaccggcttca
acaaacccttttttggatgatgagaatggaaatgaggagccagcagagaaggaggaagat
atcgataagcctcggaaaccaaaggcacaggacaacccttttcatggcataatctccaag
tgctttgagccgcacctctatgtttacattgagtctcaggacaaaaacctaggggagctc
attgatcgttttgtagctgactttaaagcacagggccctccaaagtccaacacagaagat
gggggagcagtgctgcctagttgtgcagatctgtttgtgtattataaaaagtgcatggtc
cagtgttcccagctcagcacaggagaacctatgatagcattatctaccatctttcagaaa
taccttcgtgaatatgcttggaaaattctgtctggaaatttacccaagaccacaagtaac
agtggggggttaacaattagtagtctgttaaaggaaaaagaaggttcagaagttgccaaa
ttcacccatgatgagctttgtctgatttgcagcatcctcagcacagctgaatactgtctg
gccaccacacaacagcttgaagagaaattgaaggagaaagtggacaaagttttaatggaa
aggataaacctgacaggagagatggacactttcagcactgtcatatctaatagcatccag
ttgttggttcaggacctagatgcagcctgtgatccagcattaactgctatgagtaagatg
ccttggcagagtgttgagcatgtgggagaccagagtccatatgtcacatcaattataatg
cacattaagcagaatgtgcctatcatccgggataacctggcatcaacacgaaaatatttt
acacagttttgtatcaagtttgccaactctttcattccaaagttcataaatcacctcttc
aggtgtaaacccatcagtatggttggagcagagcagcttctattggatactcattctctg
aagacagtcctgttggaccttccttctataggatctcaagtggttcgtaaggcacctgcc
agctacacaaagattgttgtgaagggtatgactcgtgctgagatgatacttaaggtggtt
atggcacctcatgaacctccagtcatctttgtggataattacattaaactccttgctgat
ggaaacccagaaacattccaaaagatacttgatatgaagggcctgaaacgcagtgaacag
agcagcatgcttgacctcttccgacagaggcttccaacaccaccttcagggggagatggc
atgccttctttatccttcagcacccctactcctgagcaagaatcatcaaggattcgtaaa
ctagagaaactcatcaaaaagagactgtga
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