Polypterus senegalus (gray bichir): 120531527
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Entry
120531527 CDS
T08668
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04142
Lysosome
psex04144
Endocytosis
psex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120531527
04142 Lysosome
120531527
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120531527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120531527
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120531527
Membrane trafficking [BR:
psex04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120531527
Exosome [BR:
psex04147
]
Exosomal proteins
Proteins found in most exosomes
120531527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
120531527
NCBI-ProteinID:
XP_039612945
LinkDB
All DBs
Position
6:122861028..123027218
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDLNDPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISTKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASV
LQESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VVQAANHSGNWEDLVKYLQMARKKARESYVETELIFALAKTNRLAELEEFVNGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNFF
TKVKQLPLVKPYLRSVQNHNNKAVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQ
EEKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LDASESLRKEEEQATETQPIVYGQAQLMLTAGPSVAVPPQQAYGYGYTAPAYGQPPAQPT
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatacttcccatccgcttccaggagcacctgcagcttcaaaacttgggaatt
aatcctgcaaacattggatttagcaccttaaccatggagtcagataaatttatctgcatc
cgagagaaagtgggtgaacaggcccaagttgtcatcattgatttgaatgatcccaacaat
cctattcgacgtcccatctctgctgacagtgccatcatgaatcctgccagcaaagtcatt
gcattaaaagacgctgcaaaaacacttcaaatttttaatatcgaaatgaagagtaagatg
aaagcccacaccatgacggatgatgtcacattctggaagtggatctcacttaatacggta
gcacttgtaactgacaacgcagtttatcactggagcatggaaggagattcacagccagtg
aaaatgtttgaccgacattctagccttgctggctgccagatcatcaattaccgcactgat
gctaaacagaagtggctgttgcttattgggatttctgcacagcaaaatcgagttgttggt
gcaatgcagctatattctgttgatcgtaaagtttcccagcccattgagggtcatgctgca
gcctttgctcaatttaaaatggaaggcaatgctgaagagtctaccctcttttgctttgct
gtaagaggacaagctggaggaaagttgcacatcattgaggtgggcacacctcctacagga
aaccagccttttccaaagaaagctgttgatgtcttttttccaccagaggctcagaacgat
ttccctgttgcaatgcagataagcaccaagcaagatgttgtgtttttaattaccaaatat
ggttatattcatctatatgacctggaaactggcacctgtatttatatgaacagaattagt
ggagagaccatctttgttactgctcctcatgaagccacctctggaatcattggtgtgaac
agaaagggacaggtcttgtcagtatgtgtagaagaggagaatattataccttacattact
aatgtgctgcagaatccagaccttgcactccgcatggctgtccgaaacaacttggctggg
gctgaggaactatttgctcgcaagtttaacaacctctttgcccagggaaactattctgag
gcagctaaagtggcagcaaatgcaccaaagggaatacttcgcactcctgatactattaga
cgtttccaaagtgtccctgcacagcctggacagacttcacctttgcttcagtactttgga
atcttgcttgatcagggacagctaaataaattcgagtctctagaactctgccgtccagtt
cttcagcagggtcgaaagcagctgctggaaaaatggctgaaagaagacaaactggaatgc
tcagaagaacttggtgatcttgtgaaatctgtagacccaactcttgctcttagtgtctat
ctcagagcaaatgttcccaacaaagttatccagtgctttgctgaaactggacagttccaa
aaaattgtcctttatgcaaaaaaggttggctatactcctgactggattttcttgctgcgt
aatgttatgaggataagtccagagcaaggcttgcaattttcccagatgttagtgcaagat
gaagagcctctggcagacatcacgcagatagttgatgttttcatggaatacaacctgatt
cagcagtgcacttctttcttactcgatgctttaaaaaacaatcgtccatctgaaggtcca
cttcaaacccgcctgttagagatgaaccttatgcatgctccacaggtagcagatgccatc
cttggtaatcagatgttcacccattatgaccgagcccacattgctcaattgtgtgaaaag
gctggtttgctgcaaagagcgctggagcactacactgacctctatgatatcaaacgagct
gttgttcacactcatttacttaatcctgagtggctggtgaacttctttgggtcattatcc
gttgaggactctcttgagtgcttaagggctatgctctctgctaatattcgtcagaatctt
cagatctgtgtacaagttgcatctaaataccacgaacagctgtctacacagtcactcatt
gagctgtttgaatcatttaagagttttgaaggtctgttttacttcctgggctctattgtc
aactttagccaggatccagaagttcacttcaaatacatccaggcagcctgcaagactggt
caaatcaaagaagttgaacggatttgcagagaaagcaattgctatgatcctgagagagtt
aagaatttcttgaaggaagctaagctaactgatcagcttccactaattattgtgtgtgac
agatttgattttgttcacgatttggtcctgtacttataccgaaacaaccttcagaaatat
attgaaatctatgtccagaaggtaaatcccagtcgccttccagtggtcattggtggttta
cttgatgtggattgctctgaggatgtaattaaaaaccttattttggttgtgaggggtcag
ttctccacagatgaacttgtggcagaagttgagaagcgtaacagattgaagttacttctg
ccatggcttgaagctcgaattcatgaaggttgtgaagaacctgctacccataatgctctg
gcaaaaatctatattgacagcaacaacaatcctgagcgcttcttgcgggagaacccatat
tatgatagtcgtgtagttggcaaatactgtgagaagcgtgatcctcacttggcatgtgtg
gcatatgagcgtggccagtgtgatctggagcttatcaatgtatgcaatgaaaattccctt
ttcaagagtctgtcccgttatcttgtccgccgaaaggatcctgaactgtgggcaagtgta
ctgcaagaaagcaatccttaccggaggcctctaatcgatcaagttgttcagactgcacta
tcagagacacaagacccggaggaggtttctgtgactgtaaaagctttcatgacagctgat
cttcctaatgaacttattgagctccttgaaaaaatagttttggacaattcagtgttcagt
gaacacaggaatctacagaaccttctaattcttactgccatcaaagctgatcgcactcgt
gtaatggaatacataaaccgcctagacaattatgatgccccagatattgcaaacatagcc
atcagcaatgagctctttgaggaagcctttgccattttccgcaaatttgatgtgaacacg
tctgcagttcaggtgcttattgaacatattggaaatttggacagagcttatgagtttgca
gagcggtgcaatgaacctgcagtttggagccagcttgccaaagcccaactacaaaagggt
ttggttaaagaagccattgactcctacattaaagctgatgacccttcagcatatatggaa
gttgttcaagcagcgaatcatagtggaaactgggaggatcttgtcaagtatttgcaaatg
gctcgtaaaaaagccagagaatcttatgttgaaacagagttaatttttgctttggccaag
accaaccgcttagcagagctggaggagtttgttaatggccccaacaacgcacacattcaa
caagtaggtgatcgctgctatgatgagaaaatgtatgatgcagccaaactcctctacaac
aatgtgtccaactttgggcgcttggcttctacattagttcacctaggtgaatatcaagct
gcagttgatggtgctcgaaaggcgaatagcactcgaacatggaaagaggtttgctttgct
tgtgtggatgggaaagaatttcgcttggcacagatgtgtggtttgcacattgttgttcat
gctgatgagctggaggaactgataaactactatcaggaccgtggttattttgaagagctg
attacaatgctggaagcagctctgggtctagaacgtgctcatatgggaatgttcacagaa
ttggccattctttactcaaaattcaagccccagaaaatgagagaacaccttgagctattc
tggtccagggtcaatataccaaaggtgctgagagctgctgagcaggcacacttgtgggga
gaactagtgttcttatatgacaagtatgaggagtatgacaatgcaattattactatgatg
aaccatccaacagatgcttggaaagaaggacagtttaaagatattatcaccaaggtggcc
aatgtggagctgtattacagggcaatacagttttatttggaattcaaacctctcttgtta
aacgaccttctgatggtactctctccacgacttgaccacactcgtgctgtcaacttcttc
actaaggtgaaacaacttcctttggttaagccttatttgcgctctgtccagaatcacaac
aacaaggcagtaaatgaagcactcaataatctattcatcactgaggaagattatcaggca
cttcgcacatctatagatgcctatgataactttgacaacatttctcttgctcagcgtctt
gaaaagcatgaactaattgaattcaggcgaattgctgcttacctctttaaaggcaacaat
cgttggaaacaaagtgtggagctctgcaagaaggatagactgtacaaggatgcaatgcag
tatgcatcagagtctaaagatacagagcttgcagaagagcttctgcagtggtttttgcaa
gaggaaaagaaggaatgttttgctgcttgcctgtttacttgttatgatctgctgagacct
gatgtcgtactggaaaccgcgtggaggcacaacatcatggacttctctatgccatacttc
atccaggtcatgagagagtatcttagtaaggttgatgcaattaaggaaaaggttgataaa
cttgatgcttctgaatcactgaggaaggaagaagaacaagcaacagaaacacaacccatt
gtatatggccaggcccaacttatgcttactgctggacctagtgttgcagttccaccccag
caagcttatggctatggttatactgcaccagcctatggccagccacctgctcagcctact
tttggttatggcatgtaa
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integrated database retrieval system
