Polypterus senegalus (gray bichir): 120531551
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Entry
120531551 CDS
T08668
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120531551 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120531551 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120531551 (ncor1)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120531551 (ncor1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
120531551 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
RelB_transactiv
Motif
Other DBs
NCBI-GeneID:
120531551
NCBI-ProteinID:
XP_039612991
LinkDB
All DBs
Position
6:complement(125119860..125321050)
Genome browser
AA seq
2595 aa
AA seq
DB search
MSSSGYPPSQGSFNTDQSRYTPHAVQYNFTTSRHQQDFAVPEFRGQEVSSASQILQQQQQ
LRRRPSLLSEFHPGADRPPERRHGYEQQFHTLSSQSDHEGVESKRQRIEQVSEAHFQRST
SAGVLPLAHNVQDGLRVSGDVKKEQPFSMKAEVPSSPGSHPVGDEPDSSPSKLSKEELIQ
SMDRVDREIAKVEQQIFKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQIIYDEN
RKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQR
EQKICQRYDQLMEAWEKKVERIENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVG
QRGTGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGL
MDDPMKVYKSRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVADCVLYYYLTKK
NENYKTLVRRNYGRRRGRNQVTAQDCSGCSGTEHQYRKENMQQITRPSQEEKVEEKIEED
KSEKAEKKDEEDKKEEEEKDDKEESKDISKDKEKADAPAEEEEGKEQATPRGRKTANSQG
RRKGRITRSMANEAAAVAAEEPPPPPPPPPEPVLQEIKSNTFQAPKTEQLQKCGRDQVRG
STVAMEAQAHRASAEPVETSRWTEEEMEIAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFY
FNYKRRHNLDYLLQQHKQGSRRSREDRDVSQCESVASTVSAPEDEENEGSNEEENPEDSE
GAENSSDTESASSPSQMDTNKASEEMSECAKTCRDSSESSADLANQTKILPEMSPVSGSA
CARPHENQFSEMHVKEEKSPEEVESTNQDERSRIAYEQHVQTKVEPVDIEIKSVADVQIK
IEADTKDKGTEKENEKGEQEEMELGLPQQEQKQESHSDNDSSATCSADEDIDGEQDTSRF
SVEKPSLLSPPGSVLVSSSMKQTHMDVHQLHQRAATIPPMNAMFAAVPMSGLALLQRQIK
AVHESSHLEDRQRHDQLETDHHSSTSPQLGTRSPTVLDREGKPFTYMPYEMKMSMDHEMQ
GITNSGRSASPYRLSPREMNKASPQPDIHATRHGMPPVLQPAPNQVLSNYSDARVTFPRH
TRPANIPSPPPLIPSSKPSEKPSFIMGGSISQGTPGTYITHNQTVYNQDSSKSSVGSISL
GIPRQQESVKPVFCLTVPVPYIKQEEFSPRGQSAQAEGLLCRAQYESVVRGNPMSASQEG
SITRGTPAKGTVEAGTFRGSITQGTPALSQSGIPADVLLKGTITKLAIEDVSSPEKGRDE
AISKAHVIYEGKSGHVLSYDTIKNVREGTRSPRTSHELIGVKRTYDIMEGGVLNRGHPVR
ESPVSAPFEGLISRVIPRDNTHPVETKERAVHTGSIMQGTPRTSADSFDEVLKYGKQIKR
ESPPIRGFEGTVGKSKAYDGVATIKEMGRSIHEIPKQDGCSQESRKTPEVVQNTRSAIEG
SISQGTPVKYDQSAIKHNVKSLITASSKLQHSMPQLEIMSEGVKVSEPVRARHTSVVSSG
PSVLRSTLHEAPKSQLSPGMYEDSNSRRTPISYGGSISRGSPMLTRSQEGGLSSGKSTGH
ERKSTMTPTQRDSVPAKSPVSSSDPVPTHSPFDPHHRGVVPGEVYRAHLQHHIDPAMAFH
RALDPAYLFQRQPSPTGYHNTYQLYAMENTRQTILNDYITSQQMQVIPRPEVTRGISPRE
QQITIPYASGTRGIIDLAQMPPTILLPHPGGTSTPPMDRITYIPGAQSPFPSRGYSQSSI
SPGHPAHLAASANVERERERERERERDREREREKEREQREREREREREREHRERERMAAA
VAASNEINYMRAGTEQPGRPSSHGYVRSPSPSVRTSENVVQQRPSIFQGTNGKSVITQLD
TSRIMQIAPSTASQSHGLPASRFSTAADALAALVDAAASAPQMDVAKVKDGKHESVRIDE
LSSRRPTMVTEPQQLHQVQHQPSLHQQQHQSIEADRRSIQSSYTPVSLPGSKPSGTSSHY
VESNKEKGPPTKSRIEEELRTRGKTTITAANFIDVIITRQIASDKDGRERGSQSSDSSSS
LSSNRYETPGGDAIEVISPASSPVQLQDKQETSFQQDVSKPSQAESDQRAFESQINRYRS
QQESPSPQQPPTSQAEIYGQVPKTHRLITLADHICHIITQDFARNQAEDFARSKALSQAP
PQTTSSTTFQNSAPTAPATGSRNKVPSRYSPEGQGQATQAHQVQHQRVSTRVSPENPSDK
SRGRPGKSPDRSHMGLESYEPISPPQSYSTMDKQEVMMQQAQRREADGSEQRSDSHSPVS
GYLPSFFTKLENTSPMVKSKKQEIFRKLNSAGGGDGDMTSAQPGTEIFNLPAVTTSGGIS
SRGHSFADPASNLGLEDIIRKALMGNLDDKQDEHQASLPQTMNLSSGNLSATIAAMAEAR
REETNPSPNSGASVGKQKIVGKGNSRKSKSPIPGQAFAGAERPSSVSSVHSEGDYHRQSS
SVWGWEDRPSSTGPTQFPCNPLTMRMLSSTPPTSMACAPASIQGQPAALQQNRMWDREPA
PLLSSQYETLSDSDD
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcgggctaccctccaagccagggatcgttcaacacagaccagagccgctat
actccacacgctgtacagtacaacttcacaacttcccgacaccaacaggattttgctgtt
ccagaatttcgtggtcaagaggtcagctcagcatctcaaattttgcagcaacagcaacag
cttcgacgacgtccctccttgctctcagaatttcacccaggcgctgacagaccaccagaa
aggaggcatggctatgagcagcaattccatactttgtcctctcagtcagatcatgaaggt
gtggagtccaaacgtcagcgaattgaacaagtttcagaagctcatttccagcgctccacc
tcggctggggttctgcccttggctcataatgtacaagatgggctgagagtttcaggagat
gtaaaaaaggaacagcctttcagtatgaaagcagaagttccttcctctcctggtagccat
cctgtaggagatgaaccagattcatcaccttccaaattgtctaaagaggagctcattcaa
agcatggatcgtgttgacagagagattgcaaaagttgagcaacagattttcaaactaaag
aagaaacagcaacaattggaagaagaagcagctaagccaccagagccggagagacctgtg
tcaccacctccagtggaacagaagcatcgaagcattgtccagattatttatgatgaaaac
cggaaaaaagcagaggaggctcataaaatatttgaaggtcttggtccaaaggttgagttg
cctctttataatcagccatcagatacaaaggtgtatcatgacaatatcaaaacgaatcaa
gtgatgcgaaaaaagttaatcctgttttttaagaggagaaatcatgcaagaaaacaaagg
gagcagaagatctgccaacgatatgatcagttaatggaagcatgggaaaagaaagtagag
agaatagaaaataatcccaggaggaaggccaaagaaagcagaaccagggaatattatgag
aggcagtttcctgaaattcgaaaacaaagggagcaacaggaacgatttcagagggttggt
cagaggggcacagggctttcagcaacaatagcaaggagtgaacatgaaatttcagaaata
attgatgggctttctgagcaggagaacaatgaaaagcagatgagacagctctctgtgatc
ccacctatgatgtatgattcggaacagagacgtgtgaaattcatcaatatgaatggccta
atggatgacccaatgaaagtttataaatctcggcagttcatgaatgtgtggaccgatcat
gaaaaggaaatatttaaagaaaaatttgttcaacatcccaaaaattttggccttattgca
tcatatctagaaagaaagaatgttgcagactgtgttttatattactatttaacaaagaaa
aatgaaaattataaaacactagtaaggcgtaattatggacgacgcagaggaaggaatcag
gtgactgcacaggactgttcaggttgtagtggcacagaacaccaatacagaaaagaaaac
atgcaacaaattacacggccatcacaagaagagaaggtggaagaaaagatagaagaagat
aaatctgagaaagctgagaaaaaggacgaggaagataaaaaggaagaggaggagaaagat
gataaagaagaatcaaaggacatctctaaagacaaagagaaggcagatgctcctgccgaa
gaggaggaaggaaaagagcaggcaactccacggggtcgcaaaactgctaacagtcaaggc
cgtcgcaaaggaaggatcacccgctcaatggctaatgaggctgcagctgtggctgctgaa
gagcctcctccaccaccaccacctcctccagagccagtgctgcaagaaattaaaagcaac
acgtttcaagcgcccaaaactgagcaactacagaagtgtggccgggatcaggtcaggggt
tccacagtagccatggaagcacaggcgcacagagcttctgctgagcctgtggagacctcc
cgttggactgaagaagaaatggaaatagctaagaaaggattagttgaacatgggcggaat
tgggcagcaattgccaagatggtgggcacaaagagcgaggcccagtgcaagaatttttat
tttaactataagagacgacacaacttggattatctccttcagcagcacaaacaaggttca
aggagatccagggaagatcgtgatgtgtcccagtgtgaaagtgttgcatctactgtgtct
gctccggaggatgaagaaaatgaaggctccaatgaagaagaaaacccagaggacagtgaa
ggtgcagagaacagttctgatacagaaagtgcatcatctccatctcaaatggacactaac
aaggctagtgaagaaatgtcagaatgtgccaaaacctgtcgtgatagcagtgaatcatca
gctgatcttgcaaaccaaacaaaaatcttgcctgaaatgtcccccgtgtctggttctgca
tgtgcaaggcctcatgagaaccagttttcagaaatgcatgttaaagaggaaaagagtcca
gaggaggttgaatccacaaaccaggatgaaagaagtcgaattgcatatgagcagcatgtg
cagaccaaagtggaacctgttgatattgaaataaaatcagttgctgatgtccaaattaaa
attgaagctgataccaaagacaaaggcactgagaaggaaaatgaaaagggggagcaggag
gaaatggagcttggtcttccacaacaggaacagaaacaagagtcacattccgataatgat
tccagcgcaacctgcagtgccgatgaggatattgatggagagcaagatacttccaggttt
tcagtagagaagccatctttgcttagtccgccaggctcagtgctagtttcatcttcaatg
aagcaaactcatatggatgtgcatcagctgcatcagagagcagccaccatccctccaatg
aatgcaatgtttgctgctgttccaatgagtggtctggcattgttgcaaaggcagattaaa
gcggtacatgagtcgtcccatttagaagaccgtcagagacatgatcaattggagactgat
catcacagctccaccagtccccagcttggtaccagaagtcctactgttcttgacagagaa
ggtaaaccatttacatacatgccttatgagatgaagatgtcaatggatcatgaaatgcag
ggtattacaaattcaggcaggtcagcgtcaccttacagactttctccaagagaaatgaac
aaagcttccccacagccagatattcatgcaacccgacatggtatgccaccagtactgcag
cctgctccaaatcaagttttgtcaaattattcagatgcacgggtgacatttccaagacac
acgaggcctgcaaacattccgtctcctcctcctctcattccttcatccaaaccttcagag
aaaccatctttcataatgggtggatccatttcacaggggactccaggtacttacataact
cataaccagactgtttacaaccaggattcttcaaagagctcagtgggatctatatcattg
ggaatacctagacagcaagagtctgtaaagcctgtcttttgtttaacagtgccagtgcca
tatataaaacaggaagagttctcccctagaggacaaagtgcacaagcagagggcctattg
tgcagggcacagtatgaaagtgttgtaagaggtaatccaatgtctgcctctcaagaaggc
agcataacacgaggaaccccagccaaaggaacggtggaagccggtacctttcgtggctca
atcactcagggtaccccagctctttctcagtcgggcattccagcagatgttcttctgaaa
ggtaccatcaccaaattagccatagaggacgtcagcagtcctgaaaagggcagagatgaa
gctatttccaaagcacatgtcatttatgaaggcaaaagtggccatgtcctgtcatatgat
actattaagaatgtgagagaaggaacaagaagtcctcgaactagccatgaacttattgga
gtgaagcgcacttatgatatcatggagggaggagtgctaaaccgaggtcacccggttaga
gaatctccagtctctgcaccttttgagggacttataagtagggtaataccacgagataac
acacatcctgttgagactaaagaaagggcagttcacactggctctataatgcaaggtacc
ccaaggacatcagctgatagttttgatgaagttcttaagtatggcaagcagattaaaagg
gagagtcccccaattcgtgggtttgagggaactgtgggcaaaagcaaagcttatgatggt
gtggctacaattaaagaaatgggccgttctattcatgagattccaaagcaggatggatgt
agtcaagaaagcagaaaaactcctgaagtggtccagaatactcgatcagctatagaagga
tcaatttcacagggcacaccagtcaagtatgatcaatcagcaattaaacacaatgtgaaa
tctcttatcactgcttccagtaagctgcagcacagcatgcctcagctggaaatcatgtct
gaaggagttaaggtatctgagcccgtcagagcccgtcacacctctgtggttagctcagga
ccttcagttcttcggtctaccttacatgaagcccctaaatctcagctcagcccagggatg
tatgaagactcaaattccaggaggacacctatcagctatggtggctcaatatccagaggt
tcaccgatgctaaccagatcccaggaaggtgggctttcatctggaaagtcaactggccat
gaacgcaagagtacaatgacaccaacacagagagatagtgtccctgcaaaatccccagtg
tctagcagtgatcctgtacccacgcatagcccatttgacccccaccatcgaggagtggta
ccaggagaggtatatcgggctcatcttcagcaccacattgacccagctatggcattccat
cgagcacttgatccagcgtacctgtttcaacgacagccatctcctacaggatatcacaac
acctatcagttgtatgccatggagaatactcggcagacaatcctgaatgattacataacg
tctcagcagatgcaggtgatcccgagacctgaagtgaccaggggaatttctccaagggag
caacagatcaccattccttatgcctctgggacaagagggattattgatctagcccagatg
cctcccacaatcctgttgcctcaccctgggggaacaagtacgcctcccatggatcgcatc
acttacatccctggtgcacagtcccctttcccttctaggggttacagccagagctctata
tccccaggtcatcctgctcatcttgctgcatcagcaaatgtcgaacgtgaacgagagaga
gagcgagagagggagcgtgacagagaaagggagcgtgaaaaagagagggagcaacgtgaa
cgggaaagagagcgtgagcgagaacgggagcaccgggaacgagaaagaatggcagctgct
gtagcagcttcaaatgaaataaattacatgcgagcaggtacagaacagccaggcaggcca
agcagtcatggttatgtgcgctctccttcgccatctgtgagaacttcagagaatgtggta
caacagagacccagtatatttcaaggaactaatggcaaaagtgtcattacacagctggat
acctcacgtataatgcaaattgctcccagcacagcctctcagtcccatggccttcctgca
tcccgtttcagtactgctgcagatgccttggctgccttggtagatgcagctgcctcagcc
cctcagatggatgttgcaaaagtaaaggatgggaaacatgaatctgttcgtattgacgag
ctgtcttcccgcaggccaacaatggttactgaaccacagcagcttcaccaagtgcagcac
cagccttcccttcatcagcagcaacaccagagtatagaagcagataggcgaagtatccag
tcttcctacactcctgtgtccctgcctggtagtaagccctctggcacttcctctcattat
gtcgagagcaataaggaaaaaggtccacctacaaaatctagaatcgaagaggagctgaga
acacgtggcaagacaactatcactgcagccaatttcattgatgttattataactcgacag
attgcctcagataaagatggtcgtgaaagaggatctcagagctcagattcatcaagcagc
ttatcatccaataggtatgaaacacctggtggagatgctattgaggttattagccccgca
agttccccagtacagctacaggataagcaggagacatccttccagcaagatgtttctaaa
ccatctcaggcagaaagtgatcagcgtgcctttgaatcacagataaaccggtaccggagc
caacaggaatctccctcacctcagcaaccaccaacatctcaagctgaaatatatggtcaa
gttccgaaaacgcatcggctcatcactctagctgatcatatttgtcatataataacacag
gactttgcccgcaatcaagcagaagactttgcccgtagtaaagctttaagtcaagcacca
ccacagactacgtcttcaacaacattccaaaattcagcaccgactgctcctgctacagga
tcacggaacaaagtgcccagtcgctatagtccagagggtcaagggcaggcaacacaggca
catcaggttcagcaccagcgagtatcaaccagggtctctccagaaaacccatctgataag
tctagaggaagacctggaaagtcccctgatcgtagtcatatgggcttggaatcttacgaa
cccatatctcctccacagtcctactcaacaatggataagcaagaggtcatgatgcagcag
gcccagaggcgagaggctgatggctcagagcagaggagcgattctcactcccctgtgagt
ggctatctgccatcattctttactaagcttgaaaacacatccccaatggtgaaatcaaaa
aaacaagagatatttcgtaagctgaactcggctggaggtggggatggtgacatgactagt
gcacagcctggaacagaaatttttaatcttccagccgtcacaacttcaggtggtatcagt
tctagaggtcattcctttgctgatcctgccagtaatcttggtttggaagacatcattagg
aaagctttaatgggaaacttggatgacaagcaagatgaacaccaagctagcctgcctcag
acgatgaacctctcatctggaaacctgtcagcaaccattgcagcaatggccgaggcccgc
agggaggaaactaacccctcaccaaattctggtgcaagtgttggaaagcaaaaaatagtg
ggcaaagggaacagcagaaagtcaaagtcgccaattcctgggcaggcttttgcaggtgca
gaaaggccatcttctgtgtcgtctgtccattctgaaggagattatcataggcagtcttca
tctgtttggggatgggaggacagaccgtcttctacagggcccacacagtttccttgcaat
cctctaactatgagaatgctgagtagcactcctcctacatcaatggcatgtgcgccagca
tcaattcagggtcagcctgctgctctccagcagaaccgaatgtgggaccgtgagccagct
ccactattatcgtcacagtatgagaccctgtctgacagtgatgactga
DBGET
integrated database retrieval system
