Polypterus senegalus (gray bichir): 120531656
Help
Entry
120531656 CDS
T08668
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120531656 (ddx52)
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120531656 (ddx52)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
90S particles
Helicases
120531656 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
AAA_19
Motif
Other DBs
NCBI-GeneID:
120531656
NCBI-ProteinID:
XP_039613195
LinkDB
All DBs
Position
6:134273905..134312222
Genome browser
AA seq
597 aa
AA seq
DB search
MDVNDLFRKLGAGAKFDFKKFGKDAERFKVIKSKESSLSFNLSRINFFGAKDGGTSKNQQ
TDSPTKEPLVSDEHPVVKKRKRIQEEKSCSQDTFKEGISKTTASLENDGIMWMSSQKEKS
SDAESKKKNKSSWKKLKHLHQEQINRLRHEHKIYIHGSDLPDPVATFEQLQKEYQISPKI
MKNIHEAGFHKPTPIQMQAIPVMLHNREVLACAPTGSGKTVAFCLPILAHLKQPMNKGFR
ALIIAPTRELASQTHREMVKLSQGTGFRVHTINKGEEAAKKFGPKSSKKCDILVTTPNRL
IYLLNQEPPGIDLRSVEWMVVDESDKLFEEGKTGFRDQLATIFLACSSHLVRHAMFSATF
ASDVEQWCKLNLDNMVSVCVGQRNAATDMVEQELLFVGTENGKLVAMRDLVKKGFLPPVL
VFVQSIVRAKELFHELIYDGINVDVIHAERTQQQRDNIVSSFRAGKIWVLICTALLARGI
DFKGVNLVINYDFPTSAIEYIHRVGRTGRAGNRGKAITFFTEEDKPLLRSIATVIKQAGC
PVPDYMVGFKKLHSKKRRRLLKKPPRRETIRTTPKFLLKKRKRNTTEKPNTKSKEEK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaatgatctttttcgaaaactaggggcaggtgctaagttcgactttaaaaag
tttggaaaagatgccgagcgattcaaggtgatcaaatctaaggaaagcagcttatcattt
aacctatcaaggattaacttttttggtgcaaaagatggtgggactagcaaaaatcaacag
acagacagcccaacgaaagaacctttggtatctgatgaacatccagttgtgaagaagagg
aagagaatacaagaagagaaatcatgttctcaagatacttttaaagagggtatctctaaa
acaacagcatctcttgaaaatgatggaataatgtggatgtcatcacaaaaagaaaagagc
agtgatgcagaaagcaaaaagaaaaacaaatcctcttggaagaagttgaaacatttgcac
caagaacagataaatcgcttgaggcatgagcacaaaatctacattcatgggtcagacctt
ccagatcctgtagccacttttgaacagttgcagaaggaataccagatcagtccaaagata
atgaagaatattcacgaggcaggtttccacaaacctacacctattcagatgcaggctatc
cctgtcatgcttcataatcgtgaagttctagcatgtgctcctactggatctgggaaaaca
gtggctttctgcctgcctatccttgctcacttaaaacaacctatgaataaaggtttccgt
gccctaatcattgctccaacaagagagctggcaagtcagacccaccgggagatggtaaaa
ctgtcccagggtacagggttcagagtccatacaattaataaaggagaggaggctgccaaa
aaatttggcccaaagtcatctaaaaagtgtgacatcttagtaacaacacctaacaggctg
atctaccttctgaatcaagaaccgccaggaattgatcttaggagtgtggagtggatggta
gttgatgaatcagataagctgtttgaggaggggaagactggcttcagagaccaactggcc
accattttcttggcttgctcttcccaccttgtgagacatgctatgttcagtgcaacgttt
gcttcagatgtagagcagtggtgcaaactgaacctggataacatggtgtctgtctgtgtt
ggacagagaaatgcagccacagatatggttgagcaagagcttctgtttgttgggactgaa
aatggaaaattggttgcaatgagggaccttgtgaaaaagggatttttgcctccagtattg
gtgtttgtacagtctatagtaagagcaaaggagcttttccatgaattaatatatgatgga
attaatgttgatgtcatccatgctgaacgaacacagcagcagcgagacaatatagtctcc
agttttcgagctgggaagatttgggtgctgatttgtacagcattgttggctagaggtatt
gattttaaaggtgtcaacctcgtcatcaactatgattttcctaccagcgcaattgaatac
atccaccgggttggacgcacaggaagagctggaaacagaggaaaggcaattacttttttc
actgaagaggacaaaccattactaaggagtattgccactgtaatcaaacaggctggatgc
cctgttcctgactacatggtgggtttcaaaaagctgcacagtaaaaagagaaggagacta
cttaagaagcctccaaggagagagaccattcggacaacccctaaattcctgttaaagaaa
aggaaaagaaatactacagagaagccaaacacgaaaagcaaggaagaaaaatga
DBGET
integrated database retrieval system
