KEGG   Polypterus senegalus (gray bichir): 120531684
Entry
120531684         CDS       T08668                                 
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
  KO
K15188  cyclin T
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120531684 (ccnt2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psex03021]
    120531684 (ccnt2a)
Transcription machinery [BR:psex03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     120531684 (ccnt2a)
    Brd4/P-TEFb complex
     120531684 (ccnt2a)
    7SK RNP complex
     120531684 (ccnt2a)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N BUR2_N
Other DBs
NCBI-GeneID: 120531684
NCBI-ProteinID: XP_039613243
LinkDB
Position
6:137484076..137502805
AA seq 730 aa
MAACRGSSSRWFFTREQLENTPSRRCGIEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNIISPTTLFLAAKVEEQPRKLEYVIKVAHACLNPQEPQLDI
KSNAYLQRAQELAILETIVLQSLGFEITIEHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPSVTLELLDELTHEF
LQILEKTPNRLKRIRNWRANQAAKRPKAEGQVTDNTFPGSSLVQNQSLVDNLTGLSGNAA
FPKPPSSTSFPVTLPSTSGGVSLDSVNVVATTIQSTSYNFTAPNDCAQHQDQSRSDMYSV
KHEILNLQQGTSGQLHPAALHHRQDKCTDYSSNKHEHKSSSSKHHVLLAPSHNPTPQKMT
LDKYKEKHTAEFALHKCKVENLELENQTSFTVAAQGMGDQQHHKKHQLQQISSSVMTSPI
KVKIPIANAEKTEKHSLDKKDKASLLKLRIPILPAEKSSKEELKMKIKVSSERHSSSDEG
SGKSKHSSPLIGKEHKEKHREHSSHRHHSGSHKHSLLHSHSHSGNSSTSKLNTDGTVTAA
LKSPVGLGSDGGTSSSSSSRKRSHADVSHNHHSKMSKSSKSSGSSSNSSSVKQYVSSHNS
ILNLPFPPPHPVTYQVGCGHLSTLVKLDKKPVETNSPDDNHEFSANRQHMDYKDTFDMLD
SLLSAQGMNM
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggcggcgtgccggggatcctcttctagatggttctttacccgggagcagctcgagaac
acgccgtcccgccgctgtggtattgagccagatcgagaactctcgtaccgacaacaagcg
gcaaacctcattcaagatatgggccagcggctcaacgtttctcagctgacaataaacact
gcaattgtttacatgcatagattttatatgtaccattctttcacgaagtttcaccgaaat
atcatatctcccactacattattcctggcagcaaaagtagaggaacagccacggaagctt
gaatatgtcatcaaagtggcacatgcctgtttaaatcctcaagagcctcagctagatatc
aagagtaatgcatacctccaacgagctcaggagctggcaatacttgagaccatagtgcta
caatctttaggttttgaaattacaattgagcatccgcatactgatgttgtgaaatgttcg
cagctagtgagagcaagcaaggatttggcacagacttcctatttcatggctaccaacagt
ctgcacctcactacattctgtctccagtacaagccaactgtgatagcttgtgtatgcatt
catttggcttgcaagtggtccaattgggaaattcctgtatcaacggatggaaagcattgg
tgggaatatgtagatccttccgttacacttgagttgctggatgaactcacacatgaattt
ctgcagattctggagaagactcccaacaggcttaaacgaattcgaaactggagggctaac
caagctgctaaacgaccaaaagccgaaggccaagttaccgacaatacttttcctggctct
tccttggtccagaatcaatctttggtggacaatcttactggcttgtctggaaatgcagca
tttcccaaaccaccttcttcaacatccttccctgtaaccctgccttcaacttcaggtgga
gtttctcttgattctgttaatgtggtagctacaaccattcaaagtacctcatacaacttc
acagcaccaaatgactgtgcacagcatcaggatcaaagcaggtcagatatgtattctgtc
aaacatgagattctcaatcttcaacaaggaacatctggacagctacatcctgccgctctt
catcacagacaggataagtgtactgattattctagtaataaacatgagcataaatcaagt
agcagtaaacatcatgtgttgcttgctccctcacataaccctacaccacagaaaatgacc
ctggacaaatacaaagagaaacatactgccgagtttgctctgcacaagtgtaaagtggaa
aatcttgaattggaaaatcagacttcttttactgttgctgcacaggggatgggtgatcag
cagcaccataaaaaacatcagctccaacagatctcaagcagtgttatgacttctccaatt
aaagtgaaaattcctatagcaaatgcagagaagactgaaaagcattctttggacaaaaaa
gacaaagctagtttgctaaaattgcgaattcctatactaccagcagagaaatctagcaaa
gaggagttaaaaatgaaaattaaggtatcttctgaaaggcacagctcttctgatgaaggc
agtggaaagagtaaacattccagtccgcttattggaaaagagcataaagaaaaacacagg
gaacattcgtctcatcgccaccatagtggaagtcataaacattccttgctacattcccac
tcacatagtgggaacagtagcacaagtaaactgaatactgatggaactgttacagcagct
ttgaagagcccagttggtcttggaagcgatgggggaacctccagttccagctcttctagg
aagaggtcgcatgcagatgtcagtcacaaccatcactccaaaatgagcaaaagttccaaa
agttcaggtagttcctctaattcttcctctgtaaagcaatatgtatcctctcacaactct
attcttaacctacccttcccccctcctcaccctgtcacataccaggtgggctgcggacat
ctcagcacccttgtgaaactggacaagaaaccagtggagaccaacagccctgacgataac
catgaattcagtgcaaaccgtcagcatatggactacaaagatacattcgacatgcttgat
tcgctgttaagtgcccaaggaatgaatatgtaa

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