Polypterus senegalus (gray bichir): 120531782
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Entry
120531782 CDS
T08668
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120531782 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120531782 (dhx36)
03012 Translation factors [BR:
psex03012
]
120531782 (dhx36)
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120531782 (dhx36)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120531782 (dhx36)
Translation factors [BR:
psex03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120531782 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
NB-ARC
Myosin_head
PhoH
RsgA_GTPase
TsaE
Sigma54_activat
AAA_7
NACHT
AAA_23
Tn7_Tnp_TnsA_C
ABC_tran
Motif
Other DBs
NCBI-GeneID:
120531782
NCBI-ProteinID:
XP_039613442
LinkDB
All DBs
Position
1:127979656..128087693
Genome browser
AA seq
992 aa
AA seq
DB search
MSYGYGNRRGRGGGRGGFNDGNRWDRGGSSNTSDSWDEQASSGGGGGGGGGRGRGRHPAH
LKGKEIGLWYAKRGGAKRKEEERKSRAVVQMDESREQHITNLLSSVQSKKVEKELPCSSR
PSASTGGQRLIHSASPEVKNCTQQDDKQDLEYLFQDIIQNSTLDQEFKNDLQKKKSDYQY
LDMKRFREKLPSYEMRKEIVQLIKNNQVVVISGETGCGKTTQVTQFILDDYIERNMGSLC
RIVCTQPRRISAISVAERVAAERAESCGDGNSCGYQIRLQCRLPRKQGSILYCTTGIILQ
WLQSDPHLSSISHIVLDEIHERSLQSDVLITIVKDLLKFRDDLKIILMSATLNASKFSKY
FGNCPMLHIPGFTFPVKEYFLEDVIDILRYYPENHDTRPRWKKRFMQGQMSRPDKEQKEQ
EYRESWPSYVRNLRDSYSESTIEALEVMDNDDKIDLALIVALIKHIVLKEEDGAILVFLP
GWDNISGLHELLMAQTMFKSEKFIIIPLHSLMPTVNQTQVFKKPPPGVRKIVIATNIAET
SITIEDIVHVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRKGRAGRVKPGKCYHLYN
KLRATLLDDYQLPEIMRTPLEELCLQIKILKLGRIALFLWKTMDPPSEETINLAITHLMA
LNALDKNEELTPLGFHLARLPVEPHIGKMILFGALLGCLDPVLIIAASLSFKDPFVIPLG
KEKLADTKRRELSKNSKSDHLTVVNAFWGWEEAKSCSYKAERDYCWENFLSSNTLQMLHN
MKGQFTEHLLAAGFVSSKNPKDHRSNINSDNEKLIKAVICAGLYPKVARIQPGFSKRSKM
VKVYTKPDGKVSIHPKSVNAEEREFNYSWLIYHLKMKTSSIFLYDCTEVTPYSLLFFGGD
ISIQKDKDQDTIAVDEWIVFQSPARIAHLVKDLRKELDALLQEKIKNPKPVDWYDTKSKD
CAVISAIIDLITTQETSASKNCAARFAGDYYD
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgggtacggaaacagacgaggccgaggtggcggtcgaggtggctttaatgat
ggcaaccggtgggacagaggaggcagttcgaataccagtgactcttgggatgagcaagca
agtagtggaggaggaggaggaggtggtggtggtcgcggacgcggacggcatcccgcacat
ctgaaaggaaaagaaattggtttatggtacgctaaaagagggggagcgaaaagaaaagaa
gaagagagaaaatcgagggctgtagtgcagatggatgaatccagagaacagcatattaca
aaccttcttagttccgttcaatcaaaaaaagtggagaaagagctgccttgttcatccagg
ccttcagcttcaacaggaggccaaagattaattcattctgccagtcctgaggtgaagaac
tgtacacaacaagatgataagcaagatttagagtatttgtttcaagatattattcaaaat
tcaactcttgatcaagaatttaaaaatgatcttcagaaaaaaaaatcagattatcagtat
ttggatatgaagagattcagggagaagctaccatcttatgaaatgagaaaggaaattgtt
cagctgattaagaacaatcaagttgtggtaattagtggagagactgggtgtgggaagaca
acacaagttactcaatttattcttgatgactacattgaaagaaatatgggatcattatgc
agaatagtttgcacacagccacgcagaataagtgctatttccgttgcagaaagagtagca
gcagaacgagcagagtcatgtggagatgggaatagctgtggatatcagatccgacttcag
tgccgcttaccaagaaaacaaggttcaatcttgtactgtacaacaggtatcatcttacag
tggctccagtcagatccacacttatcttccatcagccatattgtactagatgaaattcat
gagaggagtcttcagtcagatgtactaataacaatagtgaaagatctgctgaaattccga
gatgacttgaaaattatcttaatgagtgcaactttaaatgcaagcaagttttcaaaatac
tttggtaactgtccaatgttgcacattcctggttttacttttcctgttaaggaatatttc
cttgaagatgtcattgacattttaaggtactatccagaaaaccatgatacacggccacgg
tggaaaaaacgttttatgcaaggtcaaatgtctcgtccagataaagaacaaaaagaacag
gaatacagagaaagctggcctagttatgtgagaaatctacgtgacagttattcagagagt
acgatagaagccttagaggtgatggacaacgatgacaaaattgaccttgctttgatcgta
gctctcattaaacatattgttttaaaagaagaggatggagccattctggtgtttttgcct
ggttgggacaatattagtggacttcatgaactcttaatggcacaaacaatgttcaagtca
gaaaaatttatcatcattcctttacactctttgatgcccactgttaatcagactcaagtg
ttcaagaaaccacctccaggtgttcgtaaaattgtgattgcaactaatattgcagaaaca
agtataaccatagaagatattgttcatgtaattgatggtggaaagataaaagagactcat
tttgatactcaaaacaatatcagtactatgacagcagagtgggtcagtcttgccaatgca
aaacagagaaaaggtcgtgctggaagagttaaacctggtaaatgttatcatttgtataat
aagctaagagctactctacttgatgattatcagttaccagagataatgagaacaccactg
gaagaactctgtttacaaataaagatattgaaactgggcaggattgctttatttctgtgg
aaaaccatggaccctccatctgaagaaacaataaacttagcaataactcatttaatggct
ctgaatgcactggacaagaacgaagaacttactcctcttggttttcacttggcgcgatta
ccagttgagccacacattggaaaaatgatactgtttggtgcattactgggttgcttggat
cctgtgttaattatagcagcaagcctcagcttcaaagatccttttgtcattccattggga
aaagaaaagctggcagatacaaagaggagagaattatcaaaaaactcaaaaagtgatcat
ctaacagttgttaatgcattctggggttgggaagaagcaaagagctgcagttataaagca
gagcgagattattgctgggagaacttcctgtcttcaaatacccttcagatgctacacaac
atgaaaggacaatttactgagcacctcctggctgctggatttgtcagcagtaaaaatcct
aaagaccataggtctaacataaactctgacaatgagaaactgataaaggctgtcatatgt
gctggtttgtatcccaaagttgctaggatccaaccaggtttcagcaagaggagcaaaatg
gtgaaagtttatacaaaacctgatggcaaagtcagcatccatccaaaatctgtgaatgca
gaagaaagagaattcaattactcttggcttatctaccatttgaaaatgaaaacaagtagt
atatttctttatgactgcacagaagtgactccatattccctactcttctttggaggtgac
atttctattcagaaagataaggaccaagacaccatcgccgtggatgaatggatcgtcttc
cagtctccagccaggattgcccatttagtaaaggatttaaggaaagaacttgatgctctt
cttcaggagaaaatcaaaaacccaaagcctgtggactggtatgacacaaaatccaaggac
tgtgctgttatttcagcaatcattgatttaattactacacaagagacaagtgcttccaaa
aactgtgcagcacgatttgctggtgattattatgattaa
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