Polypterus senegalus (gray bichir): 120531788
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Entry
120531788 CDS
T08668
Symbol
ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B isoform X1
KO
K19673
tetratricopeptide repeat protein 21B
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psex03037
]
120531788 (ttc21b)
Cilium and associated proteins [BR:
psex03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
120531788 (ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_C
ARM_TT21_2nd
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_2
TPR_14
TPR_16
TPR_8
TPR_12
TPR_1
TPR_7
TPR_6
ANAPC3
CFAP70_TPR_C
TPR_11
TPR_CcmH_CycH
TPR_17
CFAP70_mid_TPR
RMD1-3
TPR_9
TPR_21
TPR_Slam
PknG_TPR
RPN7
CNOT10_TPR
TPR_Psidin_N
TPR_YpiA_C
TPR_15
Motif
Other DBs
NCBI-GeneID:
120531788
NCBI-ProteinID:
XP_039613461
LinkDB
All DBs
Position
6:170223259..170337520
Genome browser
AA seq
1317 aa
AA seq
DB search
MAEDDALTLALINYYCQQRYFHHVQNAANERLKKYGNDQVLSFFRAYGILMEDRIQEALR
ELEAIEIRGEVSLCTLIALIYTHKKSSDIDREAIQELDAKLKEDRKTAGPKALYFASLFL
WYLGRNEKAREYAERMIKISNGTKEGVILKGWIDLTSGKDAYVKKAIRHFEEGMKDGIDI
FAMMGKAEYFELRQNFSGSLETVNQIIVSFPGFIPAFIKKMKLLLTLQDWEQTLEAAQRL
LQMDRYNLDAIRMLALHSLCREGNLDESVNHLIKLVDTLDLLEPHNPDLLYKMSLAFTRV
CGRNQMILAQTCIMVERAFHMASDNAELANELGYLMVLQGRLKDALKWYKTAMTLDETSV
SALTGIIRYQLTEGQLDEAEQQLEFLKEIQQSIGKSGELSYLRAVLATKRKSSQEVIIHL
LNDAMETHLSSLQGLPLGVEYFENLNPDFILEIVKEFLNFCPTESTSEGQAPPLHLKQCA
SVLETVIKTVPGLVEAVYLMAKVHFCLGDIASAKKNLQHCLEQNPLHANAHLLMAQVYLK
QGNYKLSSQSLELCLSYNFDIREHPLYHLIKAQTQKKMGDFQETIQTLKMAMNLPGIKRT
GSTSKLRNKMEISSSDRVSLFLELAEAHRLNGEQHEAAKVIQDAINEFSGTPEEVRIVVA
NADLSLLRGDSEFALNMLQNVSPNQPYYIQAKEKMADVYLNHRKEKKLYISCYRDLVEKH
PSSHTYLLLGNAYMNIQEPEKAIEIYEEALKKNPKDGILASKIGRALVKTHNYAKAINYY
EAALKTNWQNFLRYDLAELLLKLKQYDKAEQILQHALDHEPVVDLQDLTQDGRYLVLLAK
IQSKMEKTEQAIFSLQKARDVQARVLKRVQLEQPDSALVQKQLAAEICSEIARHYTSQRD
YEKAIRFYKEALVYCETDKKVMLELAQLYLAQGEIDACQMQCEILLKTDKDNEAASMMMA
DLMFRKQDFEQAVFHFQQLLERKPDNYPTLSRLIDILRRAGKLEEVPRFLEMAEKYSSRA
RLEPGFNYCKGLYLWYTGEPNDGLRHFNKARKDNDWGQNAVYNMIEICLNPDNNTMGGEV
FENLDGDIGNSSEKQESEQLAVRTAEKLLKELKPQTVEGHVQLRIMQNYCLLATRQKTNV
EKALNVFLEIANSEKDHVPALLGIATAYMILKQTPRARNQLKHIAKMNWNAIDADEFEKS
WLLLADIYVQLGKYDNANELLKKCLLNNKSCCKAYEYLGYIMEKEQSYKDAVLNYEIAWQ
YGNQSNPTIGYKLAFNYLKAKKYVEAIDICHKVLKTHPDYPRMKKDILDKARAALRP
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggacgacgccttgacgctggcattaataaattattactgccagcaaagatat
tttcatcacgtacaaaatgctgctaatgagagactgaagaaatatgggaatgaccaagtt
ctttcatttttccgggcatatggaattttaatggaagacaggattcaagaggcactacga
gaacttgaagccattgaaattagaggagaagtttcactgtgtactttaatagctctaatt
tatactcacaagaaaagctctgatattgatagagaggccattcaggaattggatgcaaaa
ctaaaggaagaccgtaaaactgcaggtccaaaggcactttattttgcaagtttgttcttg
tggtaccttggccgtaatgaaaaagctcgagaatatgcggagaggatgataaaaatatcc
aatggaacaaaggagggtgtaattttaaaaggatggattgaccttacatctggtaaagat
gcatatgtaaaaaaagccataagacactttgaagaaggaatgaaagatggaatagacatt
tttgctatgatgggaaaggcagagtattttgaattgcggcagaatttttctggatctctg
gaaactgtcaaccaaatcattgtcagcttccctggctttataccagcatttattaaaaaa
atgaaacttctgttaaccctgcaagactgggaacaaacactggaagctgctcagagactt
ttacagatggacagatataatcttgatgcaataaggatgttagcacttcattcactgtgt
agagaaggaaatctggatgagtctgtaaatcatcttattaaacttgtggacactttggat
ctccttgagcctcataatcctgacctcctgtataagatgtccctggcttttaccagagtg
tgtggaagaaatcagatgatccttgcacagacttgcatcatggttgaaagagcatttcac
atggcatctgataatgcagaactggccaatgaacttggctatttgatggtacttcaggga
agactgaaggatgccttaaaatggtataaaactgctatgacactagatgaaaccagtgtt
tcagctcttactggtattatacgatatcagctaactgaagggcaattggatgaagcagaa
cagcaacttgaattcctgaaagaaattcagcaatctataggaaagtcaggggaactgtca
tatctacgtgcagttttagcaacaaaaaggaagtcctcacaggaagtcattattcatttg
ctcaatgatgcaatggaaacccatttatcttcccttcaaggattacccctgggcgttgaa
tattttgaaaacctcaacccagacttcattttagagattgttaaggaattccttaatttc
tgcccaacagagtcaacatctgaaggacaggcaccacctttacatcttaagcagtgtgct
tctgttctggaaactgtaatcaagactgttcctggacttgtagaagctgtttacttaatg
gcaaaagtacatttttgtttaggtgatatagcatctgccaagaaaaatctacaacattgt
ctagaacagaatccactgcatgcaaatgcacatcttttaatggctcaagtatatttgaaa
caaggcaactacaaactgtcctcccagtctcttgagctatgcctgagctacaactttgat
attagggagcatccactctatcacttgattaaagctcagactcagaagaagatgggcgac
tttcaagaaactattcaaaccttgaaaatggctatgaatttgccaggaataaaaagaact
ggaagcacttcaaaattaagaaataagatggaaattagctcaagcgatcgtgtttccctc
tttctggagttagcagaagcccacaggttaaatggagagcagcatgaggctgctaaagtg
attcaggatgctatcaacgagttctctggcacccctgaagaagtgagaattgttgttgca
aatgcagacctctcgctgcttcgaggagattctgaatttgcgcttaatatgcttcagaat
gtgagtcctaatcagccttactatattcaagccaaagaaaaaatggccgatgtatatctt
aatcacagaaaagagaagaagctatatattagttgttacagagacttggtggaaaagcat
ccaagtagtcatacatatctccttttgggtaatgcctatatgaacatccaagagccagag
aaagcaattgaaatctatgaagaagctttaaagaaaaacccaaaggatggaattttggca
agcaagattggtagagccctggtaaaaactcataattatgctaaggctattaactactat
gaagcggctttgaaaaccaattggcaaaattttcttcgttatgacttggcagaacttctt
ttaaaacttaaacagtatgataaagctgagcaaattctccagcatgcattagaccatgaa
ccagttgtagacttacaagatttaacacaggatggacgttacctggttcttttagcaaaa
atacaaagcaaaatggaaaaaactgaacaagcaattttttcattacaaaaggctagggat
gtacaagctcgagtattaaaacgtgttcagcttgagcaacctgattcagctttagtccaa
aagcagttggcagcagaaatttgttcagagattgccagacactacacatctcaaagagat
tacgagaaagccatcagattttacaaagaagcacttgtttattgtgagaccgataaaaag
gtgatgttagaacttgctcagttatatctagcacaaggtgaaattgatgcctgtcagatg
caatgtgaaatcctcctaaaaactgataaggataatgaagctgcgtctatgatgatggct
gacctcatgtttagaaagcaagattttgagcaagcagtatttcactttcagcagctccta
gaacgcaagccagacaactatccaaccctgtcacgtttaattgacattttaagaagagca
gggaagttggaagaggtccccagattcttggagatggcagaaaaatattcctctagagca
cgactagaacctgggtttaactactgtaaaggactctacctctggtacactggtgaaccc
aatgatggactcagacatttcaataaggccagaaaggacaatgactggggtcagaatgca
gtgtataatatgattgagatctgtctgaatccagataacaatacaatgggaggagaggtt
tttgaaaatcttgatggagacatagggaattcttctgaaaagcaagaatctgaacagtta
gctgtaagaacggcagagaaacttctgaaagagctaaaaccccagacagtagagggtcac
gttcagctacgcattatgcagaattattgccttctggcaacaaggcaaaagacgaatgtt
gagaaagctctgaatgtattcttagaaattgcaaatagtgagaaggaccatgtccctgca
cttcttggcatagcaacagcatatatgatccttaaacagaccccaagggctagaaatcaa
cttaaacatattgcaaaaatgaattggaatgcaattgatgcagatgaatttgagaaaagt
tggcttctgttagctgatatatatgttcaattgggaaaatatgataatgccaatgaattg
ttaaaaaaatgtcttctaaataataagtcatgctgtaaagcctatgaataccttggctat
attatggaaaaagaacagtcatataaagatgcggttctaaactatgaaatagcatggcag
tatggcaatcagagtaatccaactattggttacaagcttgcctttaattatttgaaagca
aaaaaatatgttgaagccatagatatatgccataaggtattgaaaacccacccagattat
ccaagaatgaaaaaagatattcttgacaaagcacgtgcagctttaagaccttaa
DBGET
integrated database retrieval system
