Polypterus senegalus (gray bichir): 120531897
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Entry
120531897 CDS
T08668
Symbol
nckap1
Name
(RefSeq) LOW QUALITY PROTEIN: nck-associated protein 1
KO
K05750
NCK-associated protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04810
Regulation of actin cytoskeleton
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120531897 (nckap1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120531897 (nckap1)
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Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
120531897
NCBI-ProteinID:
XP_039613663
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Position
6:187600804..187875053
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AA seq
1134 aa
AA seq
DB search
MSRAVLQPSQQKLAEKLTILNDRGIGMLTRIYNIKKQGQVWKACGDPKAKPSYLIDKNLE
SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVCELLNTI
DACQVFFDITVNFDLTKNYLDLIVTYTTLMIMLSRIEERKAIIGLYNYAHEMTHQSSDRE
YPRLGQMIVDYENPLKKMMEEFVPHSKSLSDALISLQMVYPRRNLSADQWRNAQLLSLVS
APSTMLNPAQSDTMPCEYLSLDVMEKWIIFGFTLCHGVLNTDAAALNLWKLALQSSSCLC
LYRDEVFHIHKSIEDLFVNIRGHNKRINDIRECKEAALSHGGSMHRERRKFLRSALKELA
TVLADQPGLLGPKALFVFMALSFARDEIIWLLRHADNIQKKSADDFIDKHIAELIFYMEE
LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLSVKQ
VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV
ETSDLSVFCFYSRAFEKMFQQCLELPSQSRYSISFPLVCTHFMSCTHELCPEERHHIGDR
SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE
PEREKPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMIVWEHTFTPREYLTSHLEI
RFTKSIVGMTMYNQTTQEIAKPSELQTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQ
HLDSHGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDIS
EMRALSELLGPYGMKFLSESLMWHISSQVAELKKLVVDNVEVLTQMRTSFDKPDQMAALF
KKLTSVDSVLKRMTIIGVILSFRSLAQEALRDVLSCHIPFLVSSIEDFKDHIPRETDMKV
AMNVYELSSAAGLPCEIDPALVVALSSQKSETISPEEEYKIACLLMVFVAVSLPTLASNV
MSQYSPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETD
KTTTRNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggcagtgttgcagcccagccagcagaagctggccgagaaactgaccatcctc
aacgacaggggcatcgggatgctcacccgcatttataacatcaaaaagcaaggacaagtt
tggaaggcatgcggagaccccaaagcaaaaccatcatatttgatagacaaaaatctggag
tctgctgtcaaatttatcgtcagaaaattccctgccgtggagacgcgcaacaacaatcaa
cagcttgcacaacttcaaaaagagaaatctgaaattctgaagaacctagctttatattac
ttcacttttgtggatgttatggaatttaaggatcatgtttgtgagttgctgaataccatt
gatgcttgccaagtcttctttgacattacggtgaattttgatctcaccaagaactacctg
gatctaatcgttacttacacaacattaatgatcatgttgtcacgaatcgaggagcgcaag
gctatcattgggctgtataattatgctcacgaaatgacacatcagtccagtgaccgagag
tatccaagactgggccagatgattgtagactatgaaaacccattaaagaaaatgatggag
gaatttgtaccccatagcaagtccttatccgatgccctgatttcacttcagatggtgtat
cctcggcgaaacctgtctgctgaccagtggcgcaacgcccagttactcagccttgtcagc
gctcctagcacaatgctcaatcctgctcagtctgacacaatgccatgtgaatatctttcc
ctggatgttatggagaaatggatcatttttggctttacattatgtcacggggtcttgaac
acagatgctgctgctctaaatctctggaagcttgcccttcagagcagctcgtgtttgtgt
ctctacagagacgaagtcttccacattcacaaatcaatagaggatctgtttgtgaatatc
agagggcacaacaagcgtattaatgatattagagaatgcaaagaagcagctttgtcacac
ggtggctccatgcaccgagaaagacgcaagtttttaaggtcagcgttgaaggagcttgcc
accgttctggctgaccagcctggtttgctgggaccaaaggcactttttgtgtttatggca
ctttcgtttgctcgagatgaaattatctggctccttcgccatgcggataatattcaaaaa
aagagtgcagatgactttattgacaaacatattgctgaactcatcttttacatggaagaa
ttacgagcacacgttcggaaatacggccccgtgatgcagcgatactatgtccagtatttg
tcaggctttgacgctgttgttctcaatgagcttgttcagaatctgtctgtgtgcccagaa
gatgaatcaatcataatgtcttcatttgtaaacacaatgacttcccttagtgtaaaacaa
gttgaagatggagaggtgtttgatttcagaggaatgagacttgattggtttagactgcag
gcatacaccagcgtgtctaaggcttcattgggtctggcagatcacagagaacttgggaag
atgatgaacacaatcatatttcacacaaaaatggtggattccctggtagagatgttagtg
gaaacgtcagacctctctgttttctgtttttacagccgggcctttgagaaaatgttccag
cagtgcttggagctgccatctcagtccagatactccatttctttcccacttgtttgtact
cacttcatgagctgcactcacgagctgtgtccagaggagagacatcatattggggaccga
agtttgtctttgtgcaacatgtttttggatgaaatggcaaaacaagcccggaacctcatc
acagacatttgtacagagcagtgcactctgagtgaccagttacttccaaaacattgtgcc
aaaacaatcagtcaagccgtgaataagaaatccaaaaagcagaccgggaagaaaggagaa
cctgagcgagaaaagcctggagtggagagtatgaggaaaaaccgactactagtcaccaac
ttggacaagctgcacactgccctgtcagagctctgcttctcgatcaattatgtccccaac
atgattgtgtgggagcacaccttcacgccaagggagtatttgacttctcacttagagatc
cgcttcaccaagtcgattgtaggaatgacgatgtacaatcagacgacacaagagattgcc
aaaccttctgagctgcagacgagcgtgagagcctacatgactgtgctgcagtcaattgag
aactacgttcaaatcgatatcacccgagtgttcaataacgtcctcctgcagcagacacag
catttagacagccatggagagcctacaatcaccagcctgtacacaaactggtatttggag
accttactgcggcaagttagcaatggacacattgcgtattttcctgcaatgaaggcgttt
gtaaacctgcccacagaaaacgaactgacatttaatgccgaggaatattctgacatatca
gagatgagggccctctcagagctacttggcccttatggcatgaaattcctgagtgaaagt
ctgatgtggcacatttcttctcaggtggcagaactcaagaaacttgtggtggataacgtc
gaagtgcttacgcaaatgaggaccagctttgacaagccggaccagatggcggccctcttc
aagaaactgacatcagttgacagtgtcctgaaaaggatgaccattatcggagtaattctc
tccttccgttcactggctcaggaggcactcagagatgttttgtcatgtcacatccctttc
cttgtcagttccattgaggactttaaggatcacattccaagagagactgacatgaaggtg
gccatgaatgtctatgaactttcatcagctgctggattgccttgtgagattgacccggcc
ttagtagttgctttatcctctcaaaagtcagaaaccataagtccagaggaagaatacaaa
attgcctgcctcctgatggtttttgtggctgtttctttgccaacccttgctagtaatgtc
atgtcgcagtacagtcctgcaattgaaggtcactgcaacaacattcattgcttagcaaaa
gcgataaaccagatagctgctgccctcttcaccattcataagggaagcattgaagaccgt
ctcaaggagtttctggcccttgcttcttccagcctgctcaaaatcggccaggagacggac
aaaaccacgacacggaaccgagagtcggtttatttactgctggatatgattgtgcaagag
tctccctttcttaccatggacttgttggagtcctgctttccgtacgtcctcttgagaaat
gcctaccacgccgtctacaagcagagcgtcacgtcttcagcatag
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