Polypterus senegalus (gray bichir): 120531907
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Entry
120531907 CDS
T08668
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04510
Focal adhesion
psex04512
ECM-receptor interaction
psex04514
Cell adhesion molecules
psex04672
Intestinal immune network for IgA production
psex04810
Regulation of actin cytoskeleton
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120531907 (itga4)
04514 Cell adhesion molecules
120531907 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120531907 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120531907 (itga4)
04810 Regulation of actin cytoskeleton
120531907 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120531907 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120531907 (itga4)
04515 Cell adhesion molecules [BR:
psex04515
]
120531907 (itga4)
04090 CD molecules [BR:
psex04090
]
120531907 (itga4)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120531907 (itga4)
Exosomal proteins of other cancer cells
120531907 (itga4)
Cell adhesion molecules [BR:
psex04515
]
Integrins
Integrin alpha subunits
120531907 (itga4)
CD molecules [BR:
psex04090
]
Proteins
120531907 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF11
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
120531907
NCBI-ProteinID:
XP_039613686
LinkDB
All DBs
Position
6:complement(189483337..189674633)
Genome browser
AA seq
1025 aa
AA seq
DB search
MELRKFGEVWGCGGIWRLACLCCLLRYSRCYNVDVKHSVNFHGPHGSLFGYSLLLHRHDT
GKWVLVGAPLANSTFNASIMNPGAIYKCSLTDISGSCEQLPFGSGREPTCGKTCQAERDN
QWLGVSLSGRLTEDGHILACGHRWKNIFYTQRENHKLPHGVCYRLRSDLTQMGGPLIPCY
KDYHRKFGENYGSCQAGMSSFLFEDLMVIGAPGSNYWTGSVMVYKTSNNSLKAYNDYDNM
VTYGSYLGYSVSAGHFMSPTSTEVVGGAPQYGQTGKVYIFGVSASSQLRIITQLNGKLLG
SYYGASLCAADLNADGLTDLLVGAPMFSTVREEGRVYVYLNRGDAKMEELEFTLMGSNSY
SARFGETITDLGDIDNDGFTDLAVGAPQEDDLTGAVYIYNGRKKGISRSFSQRITGETLG
HPFKMFGQSVAGGVDVDDNGYPDMVVGAFLSDAAVVLRTRAIVIVDASVHLPATVNRTRP
ECMENRQPAVCINITVCFMVQAKGVPGHVGLLYNVTSDVLRKKDLPFRFYFLGNGTSNST
TGSIHVQHNRLTCVTHQAFMRKEVRDIFSPIHFEVSYQLGEHIVKSQNAKHFPPLMPILQ
QREGQDHRLMNQTMFARYCVWENCSANLQVYAEFALPQSTAGKRYFAIGSGKTVTLSMSL
FNAGDDAYQTTIHVSLPKSLHFIKVLESEEKHISCDFHQEEQLLNKLKCSVGHLYINSLS
QTNFALLLDVDKHVTPEDLHITVNATCECAENTNLLHDNLATAVLPLRYEVDLGAHGFVS
PSFFTFGPSKQVVDSCFTETFNYTFTMTNFGPSRASNTMLELSIPNSVAMQPFQLVNIVD
LKTSQGECLLPKQEQNCEVQDPFDSLTDVVFFFSKTNKRLLYCMHEDTTCLNVTCNLGSM
ESGAVATIHLILELNPIVLAIARNSIVQIMTTSRAFPEPDPYVVHVQRDHLAQVLVEAHH
DGIPKERVRIFLLLSGLVMGFLLLFMLIYTLWKVGFFKRSFKKQEEQQQLRRESWDYVTK
SKDVY
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagaaagtttggcgaagtttggggatgcggtggcatctggaggctggcgtgc
ctctgctgtttgctgcgctactcccggtgttacaatgtggacgtgaaacactccgtgaac
tttcatggaccccacggatctctgtttgggtactcgctgctactgcatcgacacgacact
ggaaagtgggtcctggtgggagctcctctggccaactccaccttcaatgcctccattatg
aatcccggggccatttataagtgcagcctcacggacatctcagggtcctgcgagcagctc
ccatttggaagcggcagggagccaacgtgtgggaagacctgccaggcagagagagacaac
cagtggcttggcgtgagtctgtcggggcggctgacagaggacgggcacattctggcttgc
ggccatcgctggaagaacatcttctacactcagagagagaaccacaagctaccccacggc
gtctgctacagactgcggtccgatctgactcagatgggtgggcccttgattccgtgttac
aaagattaccatcggaaatttggagagaattacggctcctgccaggccggcatgtcaagc
tttctgtttgaggatctgatggtcatcggagcgccagggtcgaattactggacagggtcg
gttatggtgtataaaacatccaacaactccttgaaggcatacaacgattacgacaacatg
gtcacgtatggaagctacctgggttattctgtctccgccgggcactttatgagccctaca
agcactgaagttgttggtggtgcccctcagtatggccagactggtaaagtttacatcttc
ggtgtctctgccagcagtcagctgaggatcatcacccagttaaacggaaagctgcttgga
tcctattatggtgcttctctctgcgcagctgacctgaatgcagacggactgactgacctg
cttgttggcgcaccgatgttcagcaccgttagagaagaagggagagtctatgtatacttg
aaccgaggagatgctaaaatggaggagttggaattcaccctcatgggaagcaattcttat
tcagcgaggtttggggaaacgatcacagatctgggggatatcgataacgacggatttaca
gatcttgctgtcggcgcaccacaggaggacgatctgacaggcgctgtttacatctacaat
ggccggaagaaggggatctcacgctccttctctcaaagaattactggagagacccttgga
cacccttttaagatgtttggccagtctgtggcaggaggtgtggacgtggatgacaacggg
tatccagatatggtggtaggagccttcttgtctgatgctgcggtggttttgaggacccgg
gcgattgtcatcgtggatgcctcagtgcatctccctgccaccgtcaaccgcacccgacca
gagtgcatggagaacaggcaacctgccgtctgcatcaacatcactgtgtgcttcatggtc
caagccaagggcgtccctggtcatgttggtttgctgtataacgtgacgtccgacgtcctt
cggaagaaagacctcccgtttagattttactttttgggaaatgggaccagcaacagcacc
acaggaagcatccatgtccagcacaatcgtctgacatgtgtgacccaccaggcgttcatg
aggaaagaagtccgggacatcttcagccccattcattttgaagtgtcctaccagcttggt
gagcacattgtgaaaagccagaatgccaagcactttcctcctcttatgccaatcctccaa
cagcgagaggggcaggaccatcgtctcatgaatcagaccatgtttgctcgctactgtgtc
tgggaaaactgctctgccaacctgcaagtgtatgccgagtttgcactgccacagtccaca
gctggtaaaagatattttgcaatcggaagtggaaagacggtgacgctcagcatgtccctg
ttcaatgcgggagacgatgcctaccagacgaccattcacgtcagcctccccaaaagcctt
cacttcattaaagtcctggaatcggaggagaaacacatcagctgtgattttcatcaggag
gagcagcttttgaacaagctgaagtgttccgtcggccatttgtacatcaactcgctttcc
cagacaaacttcgctctccttctagatgtggataaacatgtcacccctgaggacctgcac
atcacagtcaatgctacctgtgaatgtgctgaaaacacaaacctcctccatgacaacctg
gccacggcggtgcttcctttgcgctacgaggtggacctgggagcccatggatttgtatct
ccttccttcttcacctttggaccatcaaagcaggtggtggacagctgtttcacagagaca
tttaattacacttttaccatgactaattttggccccagcagagcatcaaacaccatgctg
gagctttccattcccaactccgtggcaatgcagccattccagctggtgaacatcgtggac
ttgaagactagccaaggagagtgcctccttcccaaacaggagcagaactgtgaagtccag
gaccctttcgactccctcaccgatgttgtgttcttcttctctaagaccaacaaaaggctc
ctgtattgcatgcatgaggacaccacatgtttgaacgtcacctgcaacttgggatcgatg
gagagcggagcagtagccacgatacacctcatccttgagctcaacccaattgtgctagcc
atagctcggaattctattgtacaaatcatgacaacttccagagcgtttccagagccagac
ccttacgtggttcatgtccagagagatcaccttgcacaggttcttgtcgaagctcatcat
gacgggattccaaaggagagagtgaggatcttccttctgctgagcggtctggtcatgggc
ttcctactgctgttcatgctgatctacactctgtggaaggtcggattcttcaagagaagt
ttcaagaagcaggaggagcagcagcagcttcgacgggagagctgggactacgtgacaaaa
tcgaaagatgtctactga
DBGET
integrated database retrieval system