Polypterus senegalus (gray bichir): 120531941
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Entry
120531941 CDS
T08668
Symbol
als2b
Name
(RefSeq) alsin
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120531941 (als2b)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
120531941 (als2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DH_Alsin
WD40_RLD
RCC1
RCC1_2
MORN
VPS9
PH_alsin
Alsin_RLD
HA_Alsin
DH_ALS2
PH
RhoGEF
SOS1_NGEF_PH
Tudor_2
Motif
Other DBs
NCBI-GeneID:
120531941
NCBI-ProteinID:
XP_039613756
LinkDB
All DBs
Position
6:192883011..192943675
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AA seq
1651 aa
AA seq
DB search
MEDAEKIVEPDHQERGLLYTWRGYSCSVTPQRVLGLGSKPVLQASLGVQHGVLLTEGGEV
YSFGELPWRQPTGSGPALPVLEEALLGKRIVAVAAGSFHSGAVSDDGIVFMWGENSSGQC
GVADKRFVPRPFAMTIADPESSPPQLIKMVSLACGEQHTLALSARGDVWAWGSGCQLGLV
TSSFPVFMPQRVEHLAGRRVLQVACGAFHSLALVQRLPPQEARPAPDKCNHCNQLLITMT
DKEDHVIISDSHYCPLGVELSGSESRQGSPVLKLRSSPSEASLSSNEMETLRLDSLSLSS
IGAKSDNGIGAAAHQMASEAHDEQPLDNNTGISGVDLALHSSLDSSEEAVQDNLKMTSVH
PAAEQMDEGKGAPFVKAAADLTGGTSLSPPLTVAATLNSLVVSCASAVGEKVASTYEALS
LKKVMGYHCQVLPIEMAKETREEQVRLEESMQGKKSSSLGDIREEEAEALSRRLSLPGLL
SQVSPRLLRKASKPRVRPVPLTPTMGNESDAHLPSLQTEVWSWGRGKEGQLGHGDVLPRL
QPLCVKSLSNKEVVRVSAGAHHSLALTAQSQVFSWGSNVSGQLGHMEPFSSIPRPAKMAD
GLRVWDVAAGQQHTLFLADGELHQPILYYSGKQVAEVDGGPHGDVSYTQQPVLLPFCISL
GYVSSVFAGGNSCLVLADQNIMGYVASIHELASTERKFYSRLSNVKSQILRPLLGVDNLC
ASLGTASTLLLQTMGSRFSRLCYLTGQHATSLNAFLRGSKDVKNLVMVEYSTFFLDTYKE
YCKTVGNFLVMGGFQALAKPSLDFFGKSPELLQRLSETNDEGAPLADLLATLFYLPVRHL
HDYGTILLKLATCFEVSSTEYQKLQDGSTKYEALAIHLKRKRKEAEYTFNFWRTFPGKMT
DSLRKPARRLICESSNKALTLHNAGRFSVNWFILFNDALVHAQFSTHHVFPLSTLWVEPI
PEEVSGLCGLKITTPEEQFVLQATSPGEKAKWLRAINQAVEQALIGCPDEPVPGPGGLSR
PEPPMSRSAKYTFYKDSRLKDATYEGRWLTGKPYGRGVLKWPDGRVYSGTFKNGLEDGFG
DLIVPNKTLIKDDHYRGQWRDGKMHGYGIYKYSTGEVYEGSFQENMRHGHGILRSGKLTS
SSPSMFIGQWVQDKKTGYGVFDDITRGEKYMGTWQEDVRHGIGVVVTQFGLYYEGAFSGN
KMMGHGLLLSEDDTSYRGDFQDDWTLSGKGTLTLPNGDYLEGTFNGEWGSGLKVAGTYCK
PSVYEADKDKGVHPKLGTLAVPPDEKWKAIFEECWHHLGCDPPGQGDMWKAWDNIAVALT
ASRRQHKDSPELLSRSHNKTLESLEVIPQHVGPMTSERYDGIRKYLIKACDTPLHPLGRL
LETLVAVYRMTYVGVGANRRLLQQAVSEITSYLKRIFELVRFLFPDLPEEGSTIPDAGTA
ATEQTARSENVPGSRPGTPLPGRLVSCSGLLLPVLLPRLYPPLFTLYALDNEREEDVYWE
CVLRLNKQPDLALLGFLGVQQKFWPNAICVFGERKQVLQSTKDQCFSSAVECLQQISTTF
TPSDKLHVIQQTFEEITQEVLALLKEDFLWSMDDLFPVFLYVVLRARIRNLGSEVHLIED
LMDPCVQHGEQGIMFTTLKACYYQIQQEKLT
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgcggagaagattgtggaaccggatcatcaggagaggggcctgctgtacacg
tggagaggatactcctgttcggtgaccccgcagagggtcctggggcttggctccaaacct
gtcttacaagcttctctcggtgttcaacatggagtgctgctaactgaaggaggtgaagtg
tacagctttggtgagttgccatggagacagcccaccggaagcggccctgctctcccggtc
ctcgaagaagctcttcttggaaagcgcattgtggctgtcgctgccggaagctttcacagt
ggagccgtctccgacgatggcattgtgttcatgtggggggagaactcctccggccagtgt
ggggtggctgacaaacgttttgtccccaggcccttcgccatgactattgccgaccccgag
agcagcccacctcagttgataaagatggtgagcctggcctgtggagaacagcacaccctg
gctctgtctgctcgtggcgatgtctgggcctggggcagtggctgccagcttggcctggtc
actagtagcttcccagttttcatgccccagagagttgagcacttggcgggccggcgtgta
cttcaggtggcttgtggggcctttcacagcttagctttggttcagcgactccctcctcag
gaagccaggccagccccagacaagtgcaatcactgtaatcagttgctaatcaccatgact
gacaaagaggaccacgtcatcatctcggacagccattactgcccgctgggagtggagctg
agcgggtcagagtccagacaggggtcaccggttctgaagctcaggagttctccatcagag
gcttctttgagcagcaatgagatggagactcttcgcctcgacagtctgtctctctcgagc
attggagccaaatctgacaatggcattggtgccgctgcccaccaaatggcctctgaagca
catgatgagcagcctctggacaacaacactggcatctctggtgtcgacctggccctgcat
agctccctggactccagtgaggaggccgtccaggacaacctcaagatgacttcagttcac
ccagcagctgagcagatggatgagggaaaaggtgccccctttgtcaaggcagctgcagac
ctcacaggtggcacttcactgtctcccccgctcactgttgctgccaccctcaacagtctg
gtggtctcgtgtgcatctgctgtgggtgagaaggtggcatccacctatgaggccctatcc
ctgaagaaggtgatgggctaccactgccaagtgctgcccattgagatggccaaggagacc
cgcgaggagcaggttcgtctcgaggagtccatgcagggcaagaagagctcgagccttggc
gacatccgggaagaggaagcggaggccctcagccgcagactttctctgcccggcctgctt
tctcaagtttcaccacggctcctgcggaaagccagcaagcctcgtgtacgcccagtgcca
cttacccccaccatgggcaatgagagtgatgcccacctgccttccctgcaaacagaggtc
tggagctggggcaggggcaaggaggggcagttgggacatggcgatgtcctaccgagattg
cagcccttgtgcgtcaagagtctaagcaacaaggaggtggtgcgggtatcagccggggca
caccattctctggcactcactgcccagtcccaggtgttttcctggggcagtaacgtctcc
ggccagctcgggcacatggagccttttagtagcatccctcgacccgccaagatggctgac
gggctgcgggtttgggatgtggcagcaggacagcagcatactctcttcctggctgatggt
gagctgcaccagcccatcctctattacagcggcaagcaagttgcagaggtggacggcggc
ccgcacggtgacgtcagctatacccagcagcccgtgcttctgcccttctgcatcagcctg
ggctatgtaagcagcgtctttgccggagggaacagctgcctagtgctggcagaccagaat
atcatgggctacgtggcaagcatacatgagctggcatccacggagagaaagttttacagc
cggctgagcaacgtcaagtctcagatcctgcgccctctgctgggtgtcgacaatctgtgt
gccagcctgggcacagcatccacccttctgctgcagaccatgggcagccgcttcagccga
ctctgttacctcactggtcagcacgcaacctctctcaacgccttcctgcgtggcagcaaa
gacgtcaaaaatctggtgatggtggagtactcgacgttcttcctggacacatacaaagag
tattgcaagacggtgggcaacttcctggtgatggggggtttccaggcgctggccaagccc
tctcttgatttttttgggaaaagcccagagctgctgcagaggctgtcggagaccaacgac
gagggagccccactggcggacctgctggccaccctcttctacctgccggtcaggcacctg
cacgactatggcacgatcctcttgaaactggccacctgcttcgaagtgagttccaccgaa
taccagaagcttcaggatgggagcaccaagtatgaagctcttgccatccacctgaagagg
aagaggaaggaagcggagtacacgttcaacttctggaggaccttcccaggcaagatgaca
gactccctgcggaagccggcgcgccgcctcatctgcgagagcagcaacaaggccctgacg
ctgcacaacgccggccgcttctctgtcaactggttcattctgtttaacgacgccctggtc
cacgcacagttttcaactcaccatgtcttccccctgtccactctctgggtggagcccatc
cctgaagaggtcagcggcctgtgtggtctgaagatcaccaccccagaggagcagttcgtc
ctgcaagcaacatcccctggggagaaggccaagtggctgagagccatcaaccaggcagtg
gagcaggccttgattggctgcccggatgagcctgtgcccggcccagggggtctgtctcgc
cccgagccacccatgtctagatctgccaaatataccttctacaaagacagccggctaaag
gatgccacgtatgaaggccgctggctgacaggcaagccttatggtcgcggagtgctgaag
tggcccgatgggcgtgtttactctggaacgtttaagaatggcctggaagacggctttgga
gacctcattgtccctaacaagacgctcattaaggatgaccactaccggggacaatggcgg
gatggcaagatgcatggatacggaatatacaagtacagcaccggcgaggtgtatgagggc
tcgtttcaggagaacatgcgccacggccatgggattctgcgcagtggaaagctgacctcc
tcctcgcccagtatgttcatcggtcagtgggtgcaagacaagaagaccggctatggcgtt
tttgatgacataacaaggggcgagaagtacatgggcacctggcaggaggatgtgcggcat
ggcattggggtcgtggtcactcagtttggactgtactatgagggcgccttcagtggcaac
aagatgatgggacacgggcttctgctctccgaagatgacaccagctacaggggtgacttt
caggacgactggacactgagtggaaaggggacgctgacactgcccaatggggattacttg
gaggggaccttcaatggagagtggggatcaggcctcaaggtggctggaacctactgcaag
cccagcgtctatgaggctgacaaggacaagggggtccatccgaaattgggcaccctggca
gtgcctccagatgagaagtggaaagccatctttgaggaatgctggcatcacctgggctgc
gacccccctggacaaggagacatgtggaaggcctgggacaacattgcagtggcgctgacg
gccagcaggaggcagcacaaggacagtccagagctgctgagccggtctcataacaagaca
ctggagagcctcgaggttattccacagcacgtgggccccatgacctccgagaggtacgac
ggcatccgcaaatatctcatcaaggcttgtgacacccctctgcacccactggggcgcctc
ctggagaccctcgtggctgtctacagaatgacctatgtgggtgtgggtgccaatcggcgc
ctgttgcagcaggctgtgagcgagatcacgtcctacctgaagaggatctttgagctggtc
aggttcctcttcccagaccttcctgaagagggcagcacaattccagatgctggcacagca
gccaccgaacagacagcccgcagtgagaatgtgccagggtccaggccaggcacccctttg
cccggccggctggtcagctgctcaggcctcctgctgcccgttcttttgccccgtctttac
ccccctctctttaccctctatgccctggacaatgagagagaggaggacgtctactgggag
tgcgtcctacggctcaacaagcagcccgacctggcgctgctcggctttctgggggtccag
cagaagttctggcccaatgccatctgcgtatttggtgagaggaaacaggtcctccagagc
accaaggaccagtgtttctcgtcggccgtggagtgtctgcagcagatcagcaccaccttc
accccctctgacaagctgcacgtcatccagcagacctttgaggagatcacccaggaagtg
ctggctctgctcaaggaggacttcctgtggtcgatggatgacctcttccctgtgttcttg
tatgtcgtcctccgagcgcgtataagaaacctgggctctgaggtgcacctcatcgaggac
ttgatggatccttgtgtccagcacggggagcagggcatcatgttcaccactttgaaggcc
tgctactatcagattcagcaggagaagctcacgtga
DBGET
integrated database retrieval system