Polypterus senegalus (gray bichir): 120532024
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Entry
120532024 CDS
T08668
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120532024
04121 Ubiquitin system [BR:
psex04121
]
120532024
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120532024
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120532024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
XPG_N
DUF3106
PEX14-like_2nd
Motif
Other DBs
NCBI-GeneID:
120532024
NCBI-ProteinID:
XP_039613875
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All DBs
Position
7:55923299..55925002
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AA seq
426 aa
AA seq
DB search
MKNCVLQTRLVESHTTDDLAKGLSEAVEDWKLVRPNVTIPVTTDNAKNIVNAVTAAGLGP
QIRCFVHTINIAAQKGMAVQKVSHLLAKMRRIVSFFHRSITGCNVFKKKQQLLQLSEKKL
IQDVPTRWNSSHDMMERYLEQQAAVYAAMADNTVKKSMKNIQNLTQEEHALAENLITLMK
TLKTVTVMMCEASSPTASMILPLKMNILNSMAQSDDDSPAVRDVKKNIREDLEQRYADPA
LQNYLHKCTALDPRFKSLRHLDDVTQLRVYGALTTELVLSIEQDQAAGTTETATSAETQT
ANSSDSPSASPPEKKLAMKELFGELFMAQEPRTRSAAEVAEEEINLYRLADCIPTDDNPL
RWWKKHQSLYPHLSKLAQCYLVVPGTSVPSERVFSTAGDIVTASRSVLSAEHVDILIFLK
KNMEIE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactgtgttttgcagacacgcctggtcgaaagtcacaccactgacgacttagcc
aaaggtctgtcagaagctgtggaagattggaagttagtgcgaccaaatgtgacaatacct
gtaactactgacaatgctaagaacatagttaatgctgtcacagctgctgggctggggcca
caaatcagatgttttgtgcatactattaatatagctgctcagaaaggaatggcagtgcag
aaggtttcccatctcctggcaaagatgagaagaattgtctccttctttcacagaagcata
acaggatgcaatgtgtttaagaaaaaacagcaattgctgcagcttagtgaaaaaaaactc
attcaagatgttccaactaggtggaactcctctcatgatatgatggaaagataccttgaa
cagcaagctgcggtgtatgctgctatggccgacaacactgtgaagaagagtatgaagaac
attcagaatctaactcaggaagaacatgcactggctgaaaatctcattacactcatgaaa
accctaaaaactgtgacagtcatgatgtgtgaagcatcatctccaacggcatccatgatc
ctgccacttaaaatgaacatcctgaactctatggcacagtctgatgatgacagcccagca
gtgagagatgtaaaaaaaaacatcagggaggacctggagcagagatacgctgatcctgcc
cttcagaattacctacacaagtgcacagctttagatcctcgattcaagtccctgcgacac
ttggatgatgtcactcagctgagagtctatggagcactcaccacagagcttgtcctgagc
attgaacaagaccaagccgcaggcaccacagaaactgcgacctccgcagagactcaaaca
gcaaactcttcagattcaccatcagcatctccaccagagaaaaagttggccatgaaggag
ttgtttggagaactgttcatggcacaggagccaaggaccaggtctgcagccgaagtggca
gaggaggaaattaacttgtacaggttagcagactgcattcccacagatgataacccactg
agatggtggaagaaacatcagagcttgtaccctcatctttccaagttggcacagtgttac
ttggttgtacctggaacctctgtcccaagtgagagggtgttttccacagcaggtgacatt
gtcacagcaagcagatctgtactgtcagcagaacatgtggacatcctaatttttctgaag
aagaacatggaaattgagtaa
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