Polypterus senegalus (gray bichir): 120532038
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Entry
120532038 CDS
T08668
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120532038
04121 Ubiquitin system [BR:
psex04121
]
120532038
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120532038
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120532038
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like_helical
ZBED1_RNase-like
zf-BED
DUF7896
Microp_apicomplexa
zf-C2H2-SPIN-DOC
DUF8247
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
120532038
NCBI-ProteinID:
XP_039613885
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Position
7:complement(95045244..95047226)
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AA seq
632 aa
AA seq
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MATASTPPEVEPPPPSLKSGVWNYFGFHVKYDPDGKRVVDKTTTVCRMCHAMLNYIGGNT
TNMTAHLRRHHPSAKTSGSRQKQQQARMLQTLPESFRQPLAHDSKRAKEIDRAIATFIAV
DMRPFSVVENTGFQEMLRVLEPHYSIPSRTYFTDTAVPALYKETKAKLETAVSAAPAVAL
TSDGWTSRATQSYLTVTSHYIDPEWQMKNCVLQTRLVESHTTDDLAKGLSEAVEDWKLVR
PNVTIPVTTDNAKNIVNAVTAAGLGPQIGCFVHTINIAAQKGMAVQKVSHLLAKMRRIVS
FFHRSTTGCNVFKKKQQLLQLSEKKLIQDVPTRWNSSHDMMERYLEQQAAVYAAMADNTV
KKSMKNIPNLTQEEHALAENLITLTKTLKTVTVMMCEASSPTASMILPLKMNILNSMAQS
DDDSPAVRDVKKNIREDLEQRYADPTLQNYLHKCTALDPRFKSLRHLDDVTQLRVYGALT
TELVLSIEQDQAAGTTETVTSAETQTANSSDSPSASPPEKKSAMKELFGELFMAQEPRTR
SAAEVSEEEINLYRLADCIPTDDNPLRWWKKHQCLYPHLSKLAQCYLVVPGTSVPSERVF
STAGDIVTASRSVLSAEHVDILIFLKKNMEIE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcctcaacgccacccgaagttgaacctcctccaccgtcattgaaatctggc
gtttggaactattttggctttcatgtgaagtatgaccctgatggtaagcgtgttgtggac
aaaactacaacagtatgtcggatgtgccacgcaatgcttaattacatcggtgggaacaca
acaaatatgactgcacatttacgccgacatcaccctagtgcaaagacaagtggaagcaga
caaaaacaacaacaagcacgcatgctacaaactttacccgagtcatttagacagccgtta
gcacatgattctaagagggcaaaagaaattgacagggcaattgcaacttttattgctgtc
gacatgcgacccttttctgttgtagaaaacaccgggtttcaggaaatgctgagagtactt
gagccccattacagtattccttcacgaacttatttcaccgataccgcagttcctgctttg
tacaaggagacaaaagctaaattagagactgcagtgtcagcagcacctgctgttgctctg
acctcagacggctggacgtcaagagctacacagagctacctgactgtcacctcacattac
attgatccggaatggcagatgaaaaactgtgttttgcagacacgcctggttgaaagtcac
accactgacgacttagccaaaggtctgtcagaagctgtggaagattggaagttagtgcga
ccaaatgtgacaatacctgtaactactgacaatgctaagaacatagttaatgctgtcaca
gctgctgggctggggccacaaatcggatgttttgtgcatactattaatatagctgctcag
aaaggaatggcagtgcagaaggtttcccatctcctggcaaagatgagaagaattgtctcc
ttctttcacagaagcacaacaggatgcaatgtgtttaagaaaaaacagcaattgctgcag
cttagtgaaaaaaaactcattcaagatgttccaactaggtggaactcctctcatgatatg
atggaaagataccttgaacagcaagctgcggtgtatgctgctatggccgacaacactgtg
aagaagagtatgaagaacattcccaatctaactcaggaagaacatgcactggctgaaaat
ctcattacactcacgaaaaccctaaaaactgtgacagtcatgatgtgtgaagcatcatct
ccaacggcatccatgatcctgccacttaaaatgaacatcctgaactctatggcacagtct
gatgatgacagcccagcagtgagagatgtaaaaaaaaacatcagggaggacctggagcag
agatacgctgatcctacccttcagaattacctacacaagtgcacagctttagatcctcga
ttcaagtccctgcgacacttggatgatgtcactcagctgagagtctatggagcactcacc
acagagcttgtcctgagcattgaacaagaccaagccgcaggcaccacagaaactgtgacc
tccgcagagactcaaacagcaaactcttcagattcaccatcagcatctccaccagagaaa
aagtcggccatgaaggagttgtttggagaactgttcatggcacaggagccaaggaccagg
tctgcagccgaagtgtcagaggaggaaattaacttgtacaggttagcagactgcattccc
acagatgataacccactgagatggtggaagaaacatcagtgcttgtaccctcatctttcc
aagttggcacagtgttacttggttgtacctggaacctctgtcccaagtgagagggtgttt
tccacagcaggtgacattgtcacagcaagcagatctgtactgtcagcagaacatgtggac
atcctaatttttctgaagaagaacatggaaattgagtaa
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