Polypterus senegalus (gray bichir): 120532283
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Entry
120532283 CDS
T08668
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120532283 (hps3)
Membrane trafficking [BR:
psex04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
120532283 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
120532283
NCBI-ProteinID:
XP_039614097
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All DBs
Position
1:complement(131302151..131344637)
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AA seq
1004 aa
AA seq
DB search
MVHVYNCHPFASQQIVPTEQEPGLFCCGGDVLFVVSAVGCKIEAFSLQEDRCTPFCRFST
MGNVLRIAHSEVGDYLVTIEEKSSSIYLRAYTNWRCQTAEKTRVGVRLLGHFVRNSSFRS
SPKEQMEIIEIPLSETPLCISCCPDTGDLLVGCEKSLIIFKLKNEVLHEQLSALDFERFL
ILHVPGWIPTAVCYCAGYIAVQIDLEVLVVKLEYVQKSSQDVSIMLGNDERTDDKPDLKR
QASQNETDDFCIFQKHQEMLGQAAVECGVSVTPEKTGVDFDEDIKIQYILYRRFAPDFFQ
GHTVEETQLRSLSLLPIYRTGDSNHCGDVRPRELLNMLCFFSLPNTGYLYSLKSPVELIS
NYQYPEKALAAVLSTRFLYVITSHDLQCFTVRCSALAARLEDPYMDTTMRTCPPTSLEVC
ALRIQLFIGLQALCLCKNHLILLSKADVDSDGIDRKVTKSTLSKKASFKKKTPEGGHGWN
LYIVDNIPVIQLYREMVDYSKKYSASNSQSQNCVHLLCEAHLLLRAALMDPMLTKTDERE
ELMVAFKESCILLGDCYSRLDTRESHLALPYYKMSGWSMTDIINRNLTFSQKTHTFGKGF
MFYLKNSLCDETGEELSTDIAEQVLTIFSSTEPSQLPHVVCSPSMINGNPATTFTCLEKW
EAITPSVTVTLTKAAIALKMKDLQLYKRQMDRHAEMLQVYGFIEEPKLLIHRTPEGIKPT
ALACHLRETQDGLLVAATVALHENGKMKLTEADVFFKVLCKETGHTESEPQLLVDFWEAL
LVASAQESIIQDLLFKLVSVYIHRISAKENLGIKPLKTAEDLINSSTHYGLIFPWVTVIT
PAHFNIAYEYQEDLQKLQALLCGPSLEVSSIFPLLEHLSDKDNAGFSVHVLCASKQGQCE
HAIVKLLDTCPEAIMLYANHELHHDKQALWWQKLLPELCERIKSSEDESDILLFSLKETL
SVIAMELNPLDFLCLMPDDGMAAFFLPYLFECSQKSLITQGECN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtgtacaactgtcacccatttgcttcgcagcagattgttccgacagagcag
gagcctggcttgttctgttgcggcggagatgtgctcttcgttgtatctgctgttggttgc
aagattgaggcattctcgctgcaggaggaccgctgcactcccttctgccggttttctaca
atgggaaatgtcctgaggatagcgcatagtgaagtaggggattatctggttacaatagaa
gagaagagcagctccatatatttgagggcatatacaaactggagatgccaaacggcagaa
aaaacaagagttggtgttcgtttgttaggacattttgtaagaaactcatcctttcgttca
tctcccaaggagcagatggaaattattgagatcccactctctgaaacacctctctgtatc
tcatgctgtccagatactggtgatcttcttgtgggatgtgaaaagagtctaattatcttc
aagttgaaaaatgaagttttacatgagcagctctcagcccttgactttgaacgcttcctc
atcttgcatgtgccaggctggatcccaacagcagtttgctactgtgctggctatattgct
gtacagatagacctggaagtactagtagtgaagctagaatatgttcagaaatcatcacaa
gatgtcagtattatgctgggtaatgatgagcggactgatgataaaccagatctaaaaagg
caggcctcccagaatgagacggacgacttctgcatctttcagaagcaccaggagatgttg
ggacaggcggctgttgagtgtggagtgtctgtgacaccagagaaaactggagtggatttt
gatgaagatatcaaaattcagtatattctgtacaggagatttgctccagattttttccaa
ggccatactgtggaagaaacccaacttcgttctcttagtctgttgcctatctatcgaaca
ggtgattctaaccattgtggtgatgtcagaccaagggagcttttaaatatgttgtgcttt
ttctcacttcccaacactggctatttgtatagcttgaaaagcccagtggaacttatctct
aattaccaatatcctgaaaaagcccttgcagcagttttgagcactcgctttttatatgtc
atcaccagtcatgatttgcagtgttttactgtccgctgtagtgcgctggcagcccggctt
gaggatccatacatggacactactatgaggacctgtccacccacctcactggaagtttgt
gctttacgaatacaactttttattggtcttcaggctttgtgcctttgcaaaaaccacctg
atcctgctaagtaaagccgatgttgacagtgatggaatagacagaaaggttaccaaatca
acactgtctaaaaaggcaagctttaaaaaaaagacgcctgagggcggtcatggctggaat
ctgtacattgtggataacattcctgttattcagctctacagggaaatggttgattatagt
aaaaaatacagtgcaagcaacagccaatcccagaactgcgtccacctcttgtgtgaagcc
caccttctcctgagggcagcattgatggacccaatgctgacgaaaacagacgaaagagaa
gagcttatggtggcatttaaagagagctgcattcttctcggagattgttacagcaggctt
gatactagagagtctcatcttgctcttccctattacaaaatgtctgggtggagtatgact
gacattattaatagaaatttaactttttcgcaaaaaacacacacttttgggaaaggtttt
atgttttacctgaagaattctttatgtgatgaaacaggtgaagaactaagtacggatata
gcagagcaggtattgaccatcttcagctctaccgagcctagtcagcttccacatgttgtg
tgcagtcccagcatgattaacggcaaccctgcaacaacattcacgtgtctggaaaagtgg
gaggcaataacccctagtgtcacagttacactgacaaaggcagcgattgcactgaagatg
aaggatctgcagctgtacaaaaggcaaatggatcgtcatgcagagatgctgcaggtctat
ggttttattgaagagccaaagttactcattcatcgtacaccagagggtattaaaccaact
gcactggcatgtcatctgagagagacacaggatgggctgctggtagctgccacagtggca
cttcatgaaaatggcaaaatgaagcttacagaagcagacgtcttctttaaggtgctgtgc
aaagaaactggacatacagaaagtgagcctcagttgctagttgatttttgggaagcactt
ttggtggcttcagctcaggaatctatcattcaagaccttctttttaaactggtttcagtg
tatatacatcggatctctgcaaaagaaaatctcggcattaaacctttaaaaacagcagaa
gacctgataaattcctccacacactatgggcttatatttccgtgggtgactgtcatcacc
ccagctcatttcaacattgcctatgagtaccaggaggatttacaaaagctgcaggccttg
ttgtgtggcccttctctagaggtgtcctcaatattcccattgctggaacatctatctgat
aaagacaatgctggctttagcgtacatgtactctgtgcatctaaacaaggacagtgtgaa
cacgcaatcgtcaaactattggatacgtgtccagaagccatcatgctttatgcaaatcat
gagctccaccacgataagcaggccctttggtggcagaaacttttaccagaactctgcgag
aggataaaatccagtgaagacgaaagtgacattttacttttttcacttaaagaaacctta
tcagttattgctatggaactgaatccactggattttctgtgccttatgccagacgacggg
atggcagctttttttttgccctatctctttgaatgcagccagaagagcttaataactcaa
ggggagtgtaactga
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