Polypterus senegalus (gray bichir): 120532296
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Entry
120532296 CDS
T08668
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120532296 (elp1)
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
120532296 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_NUP159_NUP214
TPR_GEMI5
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
120532296
NCBI-ProteinID:
XP_039614113
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Position
7:complement(5642912..5853354)
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AA seq
1322 aa
AA seq
DB search
MRNLRVQKSLECVGLQGFGRPQCFAVHSDTGTVLVASNHGIAQLDPQSKQVINEVSLTAD
EYLPEDGSGLIVAIQDLPEQESVCVATATGDILLFNLSTNQLECVGSVDSGLTGMSWSPD
QELVLLITGQQTIIMMTKDFEPITEEKIHQDEFGEGKFITVGWGKKETQFHGSEGKQAAQ
KKKMAVQPALPWDDQRVRTTWRGDGQFFAISAICPETGARKVRVWNRECVLQSTSEQVNG
LEQPLSWKPSGSLIASAQRKPNKYDIVFFEKNGLLHGEFTLPFQKDEVKVKELLWNGDST
VLAIWLEDLCVDGISKGNVYVQLWVVGNYHWYLKQSLHFGNDPETKVVSLTWDPETSDRL
HILCSDWQYLCYDWHWSIDHSGGEDASVAVIDGDKVLVSVFQRCVVPPPMCTYQLHLPCA
VNQLTFLKDPDGLTRLAVLTADSHIYVYQDNEEIKDKAANPNGCRKSIPAPQLKKVYRVT
LSKETAHRVNPLWLWELTWLRRDTFLAVVSGEGASKSQILQLVTTESEGQEAVLHVRSDL
EVNGYVTKMCYNQRTTTVVLQLDNGELLQYLWDSSGPSLEAWKSSAGCSIRFPQPCVQIA
LCTIAGEEQVLGLTDRFRFYMNDTEMASNVTSFSITDEFLLFTTHSHTCLCLRLKDLSLK
GIQASLSADASQNDEFVRRVERGSRIVSVVPQDTKVILQMPRGNLETIHHRALLLARIRK
WLDRLMFKEAFDCMRKHRINLNLLYDHNPKVFLDNVEVFLNQIDSVSYINLFLTELSDED
VTKTMYPCVSASTDQMAQKSEEKKKDLVCDAVRAAMEKLDPDKYCLSILTSHVGKTSPEL
EIALQKVHDLRVNTQSASTSVSAEDALKYLLFLVNVDELFDHSLGTYDFDLVIMVAEKSQ
KDPKEYLPFLNSLKKMEPNYQKYTIDKHLKRYKKALCHLSKCGPEHFPELLNLVKDQKLY
NDALTLYPLTSQEYKDVSCVYADHLSEEHHYEQAGLLFARCGEVQQALESFVSGCSWQLA
FCMASQLNFTEDKLAGLARTLAGKLQEQRRHNEAALILEQYAKDCEEAICALIESSSWEE
ALRLIFLHNRHDIIDTNLKPAVREAHSSQSAFLESQKAMFVKYKERLAVVRERKEKERLN
LLDDEMPDCPDSDLFSEASSMMTTSNMGSKYSQSNSRISARSSKNRRKAERKKYSLKEGS
PLEDLALLQALGEIIQAIGKLSGEVSGLLKMLVFFGYDYQARKFQKDLDETLKLIEKSVP
EIWSVSAQHDPNTLVLGPNSTANSIMNSYQQQKMPPVSQQDSELFIPPKLNKNIKWKLNL
LQ
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacctcagggtgcagaagagcttggagtgtgttggcctacagggctttggtagg
ccgcagtgctttgcagtgcattcagacactgggactgtactcgttgcatcaaatcatgga
attgcacagctggaccctcagagtaaacaggtgattaatgaggtctccttgactgcagat
gaatatcttcctgaagatggcagtggattaattgttgcgatccaggatcttcctgaacag
gagtctgtctgtgtagcaacagcaacaggagatatcttactttttaatttaagcactaat
cagctggaatgtgttggaagtgtggacagtggattgactggcatgagctggagtccagac
caggagctggttctccttattacaggccaacagaccatcatcatgatgacaaaagacttt
gagcccattactgaagagaaaattcatcaggatgagtttggtgaaggcaaattcatcaca
gttggatggggcaagaaagaaactcagtttcatggctcagaagggaaacaagctgctcaa
aagaagaaaatggcagtgcagccagctctaccatgggatgatcaaagggtgcgtaccaca
tggagaggagatgggcagttttttgccatcagtgctatttgtccagaaacaggtgctcgg
aaagtgcgagtgtggaacagagagtgtgttctccaatcaaccagtgagcaagtaaatggc
ttggagcagccattgtcttggaaaccttctggaagtttgattgcatcagcacagcggaaa
cccaacaagtatgatattgtgttttttgagaaaaatgggcttcttcatggagaattcact
cttcctttccaaaaggatgaagttaaggttaaggaactcctctggaacggtgactcaaca
gtgttggccatctggttggaagatttgtgtgtagatggcataagcaagggtaatgtctat
gttcagctgtgggttgtggggaactaccattggtacctaaagcaaagtcttcattttgga
aacgatcctgagacgaaagtggtttccttgacgtgggatcctgaaacatcagatcgacta
cacattctttgcagtgactggcagtacttgtgttacgactggcattggagtattgatcat
agtggcggagaagatgccagtgtggctgttattgatggagataaggtccttgtcagtgtg
tttcagcggtgtgtggtacctcctccgatgtgcacttaccagcttcacttaccttgtgct
gtaaaccagctgaccttcctcaaagatcctgacggactgacccgtctcgctgtactgact
gcagacagccacatctacgtctaccaggataatgaggaaataaaagacaaagctgctaat
ccaaatggctgcaggaagagtataccagctccacagctgaagaaagtgtacagagttact
ctgtccaaagagactgcccacagagtaaatccactttggctttgggagctcacgtggctg
agaagggacactttcctggctgtggtctcgggagaaggggcatcaaagtcacaaattctt
cagctggtaactacagagtcagagggtcaagaggctgttttgcatgtcaggtctgatttg
gaagtaaatggttatgtgaccaagatgtgctacaaccaaaggactacaaccgtggttctg
caacttgataacggagagttacttcagtacttgtgggattcttcagggccatctttggag
gcgtggaagagcagtgcaggctgcagcattcgtttccctcagccttgtgtgcagatcgct
ttatgcaccatagcaggagaggagcaagttttaggacttacagacagattcagattctat
atgaatgatacagagatggcatccaatgtcacatcgttttccattactgacgaatttctc
ctctttacaactcattcacacacctgcctgtgtttaagactgaaagatctgtccctgaaa
ggtattcaggcctctttgtctgctgatgctagccagaatgatgaatttgtacgcagagtg
gagagaggttccaggatagtaagtgttgtgccccaggatacaaaggtgattctacagatg
cctcgaggaaatctagagacaatccaccatcgtgctcttcttctggctcggattaggaaa
tggctagacaggctgatgtttaaagaagcttttgattgtatgcgaaagcacaggataaat
cttaatctgctttatgatcacaatcccaaggttttcctggacaacgtggaggtcttccta
aatcagattgactccgtcagttatatcaacctgtttttgacagagttaagtgacgaagat
gtcacaaagacaatgtacccttgcgtctcagccagtactgatcagatggctcagaaatcc
gaagaaaagaaaaaagacctggtctgtgatgctgtcagagcggcaatggagaaacttgat
cctgataagtattgtctctccatattgacgtcacatgtaggaaaaacgtcccctgaactg
gaaatagctcttcaaaaagttcacgatcttcgtgttaatacccagagtgcttccacatcg
gtgagtgctgaggatgctctgaagtacctcctgttcttggtgaatgtcgatgaactattt
gatcattcccttgggacctacgactttgaccttgttatcatggtggcagagaaatcacag
aaggatccaaaagaatatttgccttttctgaattccctgaagaaaatggaaccaaattac
cagaaatacaccattgacaaacatttgaagcgttacaaaaaagccctctgtcaccttagc
aaatgcggtcctgaacactttccagaacttttaaatctggtaaaagatcagaaattgtat
aatgatgctttaacactgtatcccctaacaagtcaggaatataaggacgtgagctgtgta
tatgctgatcatttgagtgaggagcatcactatgaacaagccggcctcctgtttgcacgc
tgtggggaagttcagcaggcccttgaatccttcgtgtccggatgcagctggcaacttgct
ttttgtatggcctctcaactgaactttacagaagataaactggcaggtctggcacgcact
ttagcaggaaagttgcaggaacaaagaagacacaatgaagctgcacttattcttgagcag
tatgccaaggattgtgaggaagccatctgtgcactaattgaaagctcatcttgggaagaa
gctttacgactgattttcttgcataacagacatgacatcattgatacaaatctgaaacca
gcagttcgagaggcccacagcagccagtcagcattcctggaatcacagaaagcaatgttt
gtgaagtataaggaacgtctagcagtggtacgagagcgtaaggaaaaggaaaggcttaat
cttctagatgatgaaatgccagactgcccggattctgacttattctcggaggccagcagt
atgatgaccaccagtaatatgggttcaaaatattcacagagtaattccagaatatccgcg
agatcctctaaaaaccgtcggaaggccgaacgtaagaaatacagcctgaaggaaggaagc
cccctagaagaccttgccctgcttcaggcattgggtgagatcattcaggcaatcggaaag
ctatcaggtgaagtttcaggtcttttgaaaatgttggtgtttttcggctatgactaccag
gcccgcaaatttcagaaagatttggatgaaacactcaaactaatagaaaaatcggttcca
gaaatttggtcagtgagtgctcagcacgatcccaacacgctggttctgggtccaaattca
acagcaaacagcataatgaactcctatcagcagcaaaagatgccccccgtatcacagcaa
gattctgaactttttattcctccaaagctgaacaaaaatatcaagtggaaacttaatctg
ctacaataa
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integrated database retrieval system