Polypterus senegalus (gray bichir): 120532326
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Entry
120532326 CDS
T08668
Symbol
adamtsl7
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120532326 (adamtsl7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120532326 (adamtsl7)
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
120532326 (adamtsl7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
TSP1_spondin
PLAC
PDH_E1_M
Motif
Other DBs
NCBI-GeneID:
120532326
NCBI-ProteinID:
XP_039614160
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All DBs
Position
7:10888501..11213101
Genome browser
AA seq
684 aa
AA seq
DB search
MTILPPSSLHHTAAACRSTRMFPHNFPVNSKGVGVILLLFLSHCARGTLLQMNTHLKEGM
DCDALAGSRQVIDKCGICGGDNSACEIIAGIFRPTVLSVGYHKIIEIPKGAAKINITEMV
KSRNYIALRNQLGESIINGNWAIDRPGTFSAAGTVFVYKRPNEISSKAGESITTEGPIKE
VLHVLIIYQQPNPSVYYEYILPRNDVVNLQPVSQSDIQPFGIEPLNGQLGVYTTHGQRYI
SPHGNGENLVNSFDAHQFSQEPSASTTLQPFGSEHLENKKEQRNAYNWKFTGNSRCSASC
GGGRRYPIFSCVERITHKQVSESLCDMAMRPTPEEEQCNTQPCPAFWDVGEWSECSKTCG
PGFQHRQVICRQVYGNQTHAVYAAHCQHLEKPETVSTCQLKICSEWQIRTDWTPCSVPCG
VGQRTRDIKCVDNLGDVVHDEECNMKLKPEDSENCDAGPCARSWFMTEWSDRCSAECGNG
SQTRSVVCLMNHISSLPLEGCGKEKPAESKLCNFGPCYERAEWFTGPWGQCSTECGDGTK
SRSVVCLIQSNNSFEVTEPSECSHLEKPPTEQPCHLKNCGAKWFTTEWSACSKSCDGGYR
VREVRCLADDMTASTSCDPFFMPEDREDCNLQQCMEEIDENCRDMYFNCNVVVQARLCIY
SYYKTACCASCRKVSRRNGRIRRR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcctgccaccgagctctcttcaccacacagctgctgcctgccgctccacgagg
atgtttccccacaatttcccagtgaacagcaaaggggtcggtgtcattctgctgctcttt
ttaagccactgtgcgcgtgggactcttcttcagatgaatacccacttgaaggagggtatg
gactgtgatgcactagcaggatccagacaagtgattgacaaatgtgggatctgtggagga
gacaactccgcctgtgaaataattgccggcatcttccgacctacagtcctgtccgttgga
tatcataaaattatcgaaattcccaaaggagcagcaaaaattaacataacagaaatggtt
aagagcagaaattatatcgcactgagaaatcaactcggagagtcaatcattaatggaaac
tgggctatcgacagaccaggcactttcagtgccgcaggaaccgtattcgtttacaagaga
cccaacgagatcagcagtaaagctggagagtccataactaccgaaggacctatcaaggaa
gtgcttcatgttctcattatttaccagcagcctaacccaagtgtgtactatgaatatatc
ttaccaaggaatgacgttgttaacctgcagcctgtctcccagtccgacatccagccattt
ggtattgagcctctaaatggacaactgggggtctacacaacgcacgggcagagatacatc
tcaccccatggaaacggagagaaccttgtcaatagtttcgacgctcatcagttctctcag
gaaccctcggcatctactactttgcagccctttggctctgagcatttggagaacaaaaaa
gaacaacgcaatgcctacaactggaagttcacgggaaacagccgatgcagtgcttcctgt
ggaggaggcaggcgataccccattttcagttgtgtagaaagaatcacgcacaagcaagta
tcagaaagcctctgtgacatggccatgaggccgacaccagaagaggaacagtgcaacact
cagccctgtccagccttctgggatgtgggtgagtggtctgaatgcagtaaaacatgcggc
ccgggattccagcatcggcaggtcatttgcagacaagtctacggcaatcaaacccacgcc
gtctatgccgcgcactgtcaacatttggagaaaccagaaactgtcagcacatgccagctg
aaaatctgcagtgaatggcaaatccggactgactggaccccttgttcagttccctgtgga
gtgggacaaagaacccgagacatcaaatgtgtggacaatctaggtgacgttgtccatgat
gaggagtgcaacatgaagctgaagccggaggactcggagaactgcgatgccggaccctgt
gccaggagctggttcatgaccgaatggagtgacaggtgctcggccgaatgcggaaacggc
agccagacgagaagtgtcgtctgcctgatgaatcacattagcagcttacccctcgaagga
tgtggcaaagagaagccggcagaaagcaagctttgtaactttggcccttgttacgagaga
gcggaatggtttacggggccttggggacagtgctctacagaatgcggtgatggcaccaaa
agcagaagtgtggtctgtctaattcagtccaacaacagctttgaagtgactgagccttct
gaatgcagtcaccttgagaaaccacctacggagcagccatgccacctgaagaattgtgga
gcaaaatggtttaccacggaatggagtgcgtgttccaagtcatgtgatggaggctaccga
gtgcgtgaagtgcgctgccttgcagacgacatgacggcgagtacaagttgtgatccgttc
ttcatgccggaagacagagaggactgcaacctccagcagtgcatggaggaaatagatgaa
aactgccgagatatgtactttaactgcaacgtggtggtccaggccaggctttgcatctac
tcgtactacaagacggcctgctgtgcgtcgtgcaggaaagtcagcaggaggaacggacgt
ataagaagacgataa
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