Polypterus senegalus (gray bichir): 120532389
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Entry
120532389 CDS
T08668
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
psex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120532389
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120532389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120532389
03009 Ribosome biogenesis [BR:
psex03009
]
120532389
04131 Membrane trafficking [BR:
psex04131
]
120532389
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psex04147
]
120532389
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120532389
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120532389
Membrane trafficking [BR:
psex04131
]
SNARE
SNARE associated proteins
Others
120532389
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120532389
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120532389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
120532389
NCBI-ProteinID:
XP_039614270
LinkDB
All DBs
Position
7:21331676..21364649
Genome browser
AA seq
807 aa
AA seq
DB search
MATGGEVRNDDLSTAILKQKNRPNRLIVDESINEDNSVVALSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVFLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKAN
LRKSPVSKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
AGPSQGSAGGSGGNVFSNDDNDDDLYG
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggctacggggggcgaggtaagaaatgatgacctttcaactgcaatattaaaacagaag
aacaggcctaataggctgattgttgatgaatctattaatgaagacaacagtgtggtggct
ctttcccaggcaaaaatggacgagctgcaactcttcagaggtgatacagtgcttcttaaa
ggaaagaaacgaagggagactgtgtgcattgtgctttctgatgacacttgttcagatgag
aaggtgcgcatgaacagagttgtacggaacaacctaagagtgaggctgggagatgtcatc
agcattcagccatgtcctgatgttaaatatggaaagcgtatccacgtacttcccattgat
gatacggttgagggaattacgggtaacctctttgaagtttttcttaaaccttatttcttg
gaagcctacagaccaataagaaaaggagacatctttttagtaagaggaggaatgcgagca
gtggaattcaaagttgttgaaactgacccaagtccctactgtatagtggctccagacaca
gttattcactgtgaaggagaaccgattaaacgcgaggatgaagaagaatctttgaatgaa
gttggttatgatgacattggtggtgtcagaaaacagctggctcagattaaagagatggtc
gaacttcctctgaggcaccctgcactctttaaagctattggtgtcaagcccccacgtggt
atactcttgtatggacctcctggtactggcaaaactctaattgctcgagctgttgcaaat
gaaactggagcgttcttcttcttgattaatggccctgaaattatgagcaagttggcagga
gaatccgaaagcaacttgagaaaagcatttgaagaggcagaaaagaatgctccagccatc
atatttattgatgagcttgatgccatagcacctaaaagagagaagactcacggagaggtt
gaaagacgtattgtatctcaactcctgactttaatggatggtcttaaacagagagcacat
gtaattgttatggcggctaccaaccggccaaatagcattgatccagctttaagaagattt
ggtcgttttgatagagaggtggatattggcattcctgatgccacaggtagattggaaatt
cttcagattcatactaagaacatgaagctggcagatgatgttgaccttgagcaggtagca
aatgagactcatggccatgtgggtgctgatttagctgcactgtgttctgaagctgcttta
caagccattcgaaaaaagatggatcttattgatcttgaagatgaaacaattgatgcagag
gtcatgaactcattggcagtcacaatggatgacttcaggtgggctctgagtcagagtaat
ccttcggctcttcgagaaacagtagttgaggtaccaaatatcacctgggaagatattggt
ggacttgaagatgtgaaacgagaattgcaggagcttgtacagtatccagtggagcaccca
gataagttcttgaaatttggtatgacaccttcaaaaggagtacttttttatggaccacca
ggctgtggtaaaacacttttggcaaaagcaattgccaatgaatgccaagcaaacttcatc
tcaatcaaggggccagaattgctcacaatgtggtttggtgagtctgaagccaatgtgaga
gagatctttgacaaggcccgtcaggcagccccgtgtgtcttgttctttgatgagcttgat
tctattgcaaaggctcgtggtggtaatgttggtgatggtggtggagcagctgatagagtg
atcaaccagatcttgacagaaatggatggaatgtccacaaagaagaatgtttttattatt
ggtgcaactaacagaccagatatcattgatcctgctattctgagacctggacgtctggac
cagctcatttacattcccttgcctgatgagaaatcccgcattgccattcttaaggccaac
cttcggaagtcccctgtttccaaggatgttgacctcgatttcctggcaaagatgaccaat
ggcttttcaggagctgatttgacagagatctgccaacgagcctgtaagctggcaattaga
gagtcaattgaaaatgaaattcggagggagcgtgaaaggcagacaaacccttcagccatg
gaggtagaagaggatgaccctgtcccagaaattcgcaaagaccactttgaagaagctatg
cgctttgctcgtcgttctgtcagtgataatgacatccgcaaatatgagatgtttgcacag
acgctgcagcagagtcgtggtttcggtagcttcaggtttccctctagcaatcagggtggt
gcaggaccaagccagggttcagcaggtgggagtggtggcaacgtattcagcaatgatgac
aatgatgatgacctttatggttaa
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