Polypterus senegalus (gray bichir): 120532405
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Entry
120532405 CDS
T08668
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03022
Basal transcription factors
psex03420
Nucleotide excision repair
psex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120532405 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
120532405 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psex01001
]
120532405 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psex03021
]
120532405 (cdk7)
03019 Messenger RNA biogenesis [BR:
psex03019
]
120532405 (cdk7)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120532405 (cdk7)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
120532405 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
120532405 (cdk7)
Protein kinases [BR:
psex01001
]
Serine/threonine kinases: CMGC group
CDK family
120532405 (cdk7)
Transcription machinery [BR:
psex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120532405 (cdk7)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
120532405 (cdk7)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120532405 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Seadorna_VP7
Kinase-like
Haspin_kinase
APH
RIO1
Motif
Other DBs
NCBI-GeneID:
120532405
NCBI-ProteinID:
XP_039614302
LinkDB
All DBs
Position
7:25700415..25732400
Genome browser
AA seq
345 aa
AA seq
DB search
MAVDVKARSKRYEKLDFLGEGQFATVYKAKDKHTNTIVAIKKIKLGHRLEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYMLM
TLQGLEYMHQHWILHRDLKPNNLLLDENGVLKIADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRVPFIPGDTDLDQLTRIFEALGTPTEEKWPGM
TSLPDYISFKMFPGTPLEHIFSAAGDDLLELLQGLFTYNPCTRTTATQALKKRYFSNRPG
PTPGPQLPRPNCSTEALKEQQNIHLGIKRKRDGTEQGTLAKKLVF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatgtaaaagcacgatctaaaagatacgaaaaacttgattttcttggggag
ggtcagtttgctacagtttataaagcaaaggacaaacatacaaatactatcgttgctatt
aagaagattaagcttggccatagattagaagctaaagatggtattaataggacagccctt
cgagaaatcaaacttcttcaagaattaagtcatccaaatatcattggtctccttgatgct
tttggacataaatctaatataagtcttgtttttgacttcatggaaacagatttagaggtc
ataatcaaagacacaagcctcgtattaactcctgctaatataaaagcatacatgttaatg
acgcttcaaggtcttgaatacatgcatcaacactggattttgcacagggacttaaaacct
aataatttgttacttgatgaaaacggagttttaaaaattgctgactttggtttggcaaaa
gctttcggaagtcccaacagggtctatactcatcaagttgtaacaagatggtacagatca
ccagagctcttgtttggtgcaagaatgtatggagttggtgtggacatgtgggcagtaggt
tgcatattggctgaattactccttagggtgccatttatacctggagacactgatctagat
cagttaacacgtatatttgaagcactgggcactccaacagaggagaagtggcctggtatg
actagtctgcctgactacatatcattcaaaatgtttcctggaacaccactggaacatata
tttagtgcagctggagatgatttactagagcttttgcagggactgttcacatataatccc
tgtaccagaacaacagcaactcaggcattgaagaaaaggtacttcagtaacagaccaggt
cctactccaggaccacagctaccaagaccaaattgttcaacagaagccctgaaagaacaa
caaaacattcacttgggtattaagagaaaacgagatggcactgagcaaggaacccttgct
aagaaactagttttctga
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