Polypterus senegalus (gray bichir): 120532432
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Entry
120532432 CDS
T08668
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120532432 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psex02000
]
120532432 (sv2ca)
Transporters [BR:
psex02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
120532432 (sv2ca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
Pentapeptide_4
Pentapeptide_3
RnlB_antitoxin
DUF6077
Motif
Other DBs
NCBI-GeneID:
120532432
NCBI-ProteinID:
XP_039614347
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Position
7:complement(29898409..30214491)
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AA seq
728 aa
AA seq
DB search
MEDSYRDRTSLIRGAKDIAKEAKRQAVRKVNKAVDRAQNEYTQRSYNRFQDEEDEDYYYK
QDANYNEHVNENDGGSSEDTEGHDEDDEVYEGEYQGIPNNGQQKENQVALGLPAMDQYKD
RRELETERKADEEELAQQYELIIQECGHGRFQWQLFFVLGMALMADGVEVFVVGFVLPSA
ETDMCIPNSGSGWLGSIVYLGMMVGAFFWGGMADKVGRRQSLLICMSVNGFFAFLSSFVQ
GYGFFLLCRLLSGFGIGGAVPVVFSFFSEVLAREKRGEHLSWLCMFWMIGGIYASAMAWA
IIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVGAVVALTFMPESPRYFLEVGKHDEAWMI
LKQIHDTNMRARGQPEKVFTVNRIKTPKQIDELIEIQSDTGNWVSRCIVRVRTELRGIWV
TFMRCFHYPVKDNTVKLAIVWFTLSFGYYGLSVWFPDVIKHLQADEYASNKKNFTGENVV
NMTFNFTLENQIHINGEYTNDRFYKMKFKSVTFENCVFKNCEFEDVTSVGTYFRNCTILD
SHFFYTDIDDSKLINTVIKNSNFSENKTGCQITFDDDYSAYWVYFVNFLGTLAVLPGNIV
SALLMDKIGRLTMLGGSMVLSGISCFFLWFGTSESMMIGMLCLYNGLTISAWNSLDVITV
ELYPTDRRATGFGFLNALCKLAAVLGNLIFGSLVGITKAIPILLASTVLVCGGLVGLRLP
DTRSNVLM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcgtacagagacaggacttcactgattaggggtgccaaagacattgccaag
gaagctaaaaggcaggcggtacgtaaagtgaacaaagctgtagacagagcgcagaatgaa
tatacccagcgttcctacaatcgatttcaggatgaagaggatgaggactattactataaa
caggacgcaaactataatgagcacgtgaatgaaaacgatggcggctcaagtgaagacaca
gaaggacatgatgaagatgatgaagtttatgaaggagagtatcaaggcattcctaacaat
gggcagcagaaggagaaccaggtggcccttggactgccggccatggatcagtacaaagat
cggcgtgaactcgagacagagcgcaaggccgatgaagaagagcttgctcagcaatatgag
ctcatcatccaggagtgtggccatggccgcttccagtggcaactcttctttgttctgggg
atggctttaatggctgatggtgttgaagtatttgtggtgggctttgtgctccctagtgct
gagacagacatgtgcattcctaactctggatcaggatggcttggcagcatcgtgtacctt
gggatgatggtgggggcttttttttggggcggcatggcagacaaagtcggcaggcgacaa
tccctactcatctgcatgtcagtcaatggattcttcgctttcctgtcttcctttgtccag
ggttacggattctttttgctttgccgtttgctctcaggatttgggatcggtggagcggtt
ccagtcgtgttttcctttttctcagaagttcttgccagagaaaaaagaggagagcatctg
agttggctctgcatgttctggatgattggtggaatctacgcttcagccatggcatgggcc
ataataccacactatggttggagcttcagcatggggtcagcttaccagttccacagctgg
agggttttcgtcatagtgtgtgctctgccctgcgttggtgctgtggtggcactcaccttc
atgcctgagagtccacggtacttcctagaggttggaaagcatgacgaagcctggatgatt
ctgaaacaaattcacgacaccaacatgagagctcgtgggcagccagaaaaggtcttcacg
gttaacagaatcaagactcctaaacagattgatgagctgattgaaatccagtctgacacc
ggaaactgggtttcaaggtgcatcgtccgagttcgtactgagctgagagggatctgggtg
acgttcatgaggtgcttccactacccagtgaaagacaacacagtcaagctggccatcgtc
tggtttacgctgtcttttggttactacggattgtccgtctggtttccggatgtcatcaag
cacttgcaggctgatgaatacgcatcaaacaagaaaaacttcacaggggaaaatgtagtc
aacatgacattcaacttcactttggaaaaccagatccacattaatggagaatacaccaac
gacagattttataaaatgaagttcaaatcagtgacctttgaaaactgtgtgttcaagaac
tgcgaatttgaagatgttacttcagtgggtacctacttcagaaactgcacaatattagac
tcacatttcttctacacagacattgatgactccaagctcattaacactgtaataaagaac
agtaatttttcagagaacaaaacaggctgtcaaatcacctttgatgacgactacagtgcc
tactgggtttattttgtgaacttccttggaactcttgcggttcttcctggaaatattgta
tccgcactactaatggacaagattggtcgcttaaccatgttaggtggctccatggtcctt
tctggaataagctgttttttcctgtggtttggaaccagtgaatccatgatgattgggatg
ctgtgtctttataatggccttacaatttctgcatggaattctctggatgtgattactgtg
gagctgtatccaacagacaggagggcaactggatttgggttcctgaacgccctgtgtaaa
ctggcagcagtcctgggaaatctcatatttggttccttagtaggaatcaccaaagccatt
cccatcctgctggcgtccacagttttagtatgtggaggtctcgttgggctcagactgcct
gacacaaggagcaacgttctcatgtaa
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