Polypterus senegalus (gray bichir): 120532446
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Entry
120532446 CDS
T08668
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120532446 (arhgef28a)
Membrane trafficking [BR:
psex04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120532446 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
Ank_2
SOS1_NGEF_PH
ATG16
C1_2
Ank
Prok-RING_1
PHD
Ank_4
Motif
Other DBs
NCBI-GeneID:
120532446
NCBI-ProteinID:
XP_039614377
LinkDB
All DBs
Position
7:complement(32705795..32961779)
Genome browser
AA seq
1726 aa
AA seq
DB search
MYEGSSQDHITEAKRADGNTLEFLVPGHNIPENVTVTAYANTGDNSICILGKSSLKYINN
DIVELAQFLVDNSHCLTTESHLTLISRFGMRNEVNENIDQKIVLALSHLELPFSWNILGN
HPVEEVRTRESLLHLSVRLGWFHLTQFLLCQPGGLIALSLPSEEGVTPVQLAIQNGHEDL
VQLLQNPPNPLVTPLAGISHIQTDSYSLLKFCHLTKSLTLTIKYGMERTVESSIGFLRKN
LKDNNFLRELEIQKPDWLENKVQNEDLKTKCIQVQDFLHDGNDGSHEQLNNALMPPVDDK
DGKTTELGEDNSSSLSDAFKKNKDRPTFSAAARLSAMLNAKDEIYANSMVVEQVNDLNIK
YSSHEVNSGASQQEKNASDQGEMYHLQSADQILEEMPSTSNHNLGHFHENMDLTDRDTNT
EIVPPISPVNLALQRLNMTHRTHGFNQGGSQCDSKINKQSHSSDGLDCNSEEEDNVEGSL
PFDASPSPKSTPVQQTSSGDELDYFEISPEYGGNRNRSISSANKAFAKELMESGLRLRSY
SYSSPKVSMTMPNFIRDSGAASHTEDGVFNHSGRSLLQALSLSKSVSLLHPGKHRTYSLP
EHPKEKRIEEEEWDKYIIPSKTESEKYKVSRTFSFLKNRMSGKRDKKGKNKEKDGKDKLI
HGHQFVSGSFSGPTLCLVCDKTIIGKELFQCSNCTINIHKQCKESVAPCIRRLSTSVKNK
PVTTPQSSSAKDVPLPSPPTNSWSSTIPIGISKDTRRESYSQNNLHSKNAFGPFIDRKSN
DIMDSDVDNNSSKSWSQSEEMLQVIGTSPCTDTFPLEDMIDSPLRNDIMADTVEYEAESW
SLAVEPEFCSKQEKSIIKRQDVIYELMQTEMHHIQTLMIMSEIFRKGMKEEVQLDHCIVD
RIFPCLDELFEIHKSFFSLMTERRQESMTEDSDRNFVIDRIGDILLQQFSEESAVRMKQV
YGEFCSHHIDAVNFFKELQQQNKKFNSFIKQQSNNFLVRRREIPECILLVTQRLTKYPVL
LERILKYSKEGSDEHADLTKSLGLVKDIIAAVDLKVNEYEKEQKLLEILSKIDNKTFARL
KKGNFRKHDLMNRKRVLHHEGVVFWKTATGRLKDILALLLTDVLIFLQEKDQKYVFAAVD
QKPPVIPLQKLIVREVANEERGMFLISASTSGPEMYEIHTNTKEERNTWMRLIREAVESC
PQEEDKEGETEEDRQMAEARIQKIHKYQESLHSHDEQICQSLEEKLNIYSKLTALNFPCQ
PVQEQHLLIKPDPEEVPQAAALLTTAIKEAERLLSTLTLESFCSEESIGVSDSSVKLQDS
ESCESIPEFPHESVKLNAQSSSSLTSEFEVREGELSYPHQYVPEALNEFQPGGLNHLELK
VAQSVQSLLQLIYSLQAAVTIQDSCFEVQKLLLQETERLPRYFCGRGNLLLEQGRQRNME
KHREELASVQQLQSQLRQEQQRWERECSQLQRQQVELDNELEQRERNCVLQTEQLRRDRE
DLENQLKEYQQNLERLREGQQLVEKDREELDKQQAQLHGWKHKRQSSLPVMITFPLAKTQ
VPSHTRKESLDVRGCGSIYVNEAAFQMSLNNHPESSTSVPSDTSSVHNSLNSLIAEANNI
VSDHRTEYLYQPQISYNANAWPSCTQQWIPTHPVTPLRGDLAGPNNDISGHMFDASQSMP
GQSVASSLSQQFSQSSAVKLQINQQTYISVEPENGLDGSEENIVYL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggctcaagtcaagatcatatcaccgaagcaaagagggcagatggaaacaca
ctagaatttttggttccaggtcataacataccagaaaatgtaacggtgacagcctatgct
aatactggtgacaactccatctgtatcctaggaaagagttctcttaagtatataaataat
gatattgtggaactggctcagttcttggtggataattcccattgcctaactacagaaagc
catcttacactgatttcaagatttggaatgagaaatgaagtaaatgagaatatagatcaa
aaaattgttcttgctctttctcacctggagctccctttttcttggaatatcttgggaaat
catcccgttgaagaagtcagaaccagggaatccttgcttcatctgtctgtgagattaggc
tggtttcatctcacacaatttctgctgtgtcagccaggtggtttaattgctttgtctttg
ccttctgaagaaggggtcactccagtgcagctagctatacaaaatggacatgaagatctg
gtgcagctgcttcaaaatcctccaaatccccttgtgactcctttggctggaatttctcac
atccagactgacagctacagccttttaaagttctgtcatctaactaagtccttgacttta
acaatcaaatatggtatggaaaggacggtagaatcaagcattgggtttctgaggaagaat
ttaaaggataataatttcctcagagagcttgaaatccagaaacctgactggctggagaac
aaagttcaaaatgaagacctgaaaaccaaatgtattcaagtgcaagactttttacatgat
ggaaatgatggaagccatgagcagcttaataatgctttgatgccacctgtggatgataaa
gatggaaaaactacagaattaggtgaagacaacagcagttcattgtcagatgcctttaag
aaaaacaaagatcgtcctacttttagtgctgctgcaagactttcagccatgttgaatgca
aaggatgaaatatatgccaattctatggtcgtggagcaggttaatgatctaaatatcaaa
tatagttctcatgaggtcaatagtggagccagtcagcaagagaaaaatgcttcagaccaa
ggagagatgtatcacctacaaagtgcagatcaaatcctagaagaaatgccttcaacatct
aatcacaatctggggcactttcatgagaatatggatttaacagacagagatactaacaca
gagattgtgccccctatctcacctgttaatctggccctgcaaagactgaatatgacacat
cggactcatggatttaaccaaggaggaagtcagtgtgatagcaagataaacaaacaaagt
cacagttctgatgggcttgattgtaatagtgaagaagaggataatgtagaggggtcactg
ccattcgatgcctcaccatctcccaaatctacacctgttcagcagacaagcagtggagat
gagttggactactttgaaatatccccagagtatggtggaaatagaaacaggtcgatttct
tcagccaacaaagcttttgcaaaggaacttatggaatctggacttcggctgagatcttat
tcatattcttctcctaaagtatccatgaccatgccaaacttcattcgggactctggcgct
gcgagccacacagaagatggagtattcaaccacagtgggagatcccttctgcaggctctt
tctttgtctaaatcagtgtctctccttcaccctggtaagcaccgtacttacagtttacca
gaacacccaaaagaaaaaagaattgaagaagaagagtgggataagtatatcatcccatca
aagacagaatctgagaagtacaaagtgagccgcaccttcagcttcttgaaaaacaggatg
tcaggcaaaagggataagaagggaaagaacaaggaaaaagatggaaaggacaaattaatc
catggccaccagtttgtaagtggctcattttctggacctactctctgcttggtgtgtgac
aaaaccattattgggaaagagctttttcagtgttccaactgcacgattaatatccacaaa
cagtgcaaagaaagtgttgcaccatgtattaggaggctgagcacgtcagtcaaaaacaag
ccagtgaccactccacagtcttcatcagcaaaggatgttcctcttccatctcctccaacg
aacagttggtcttccactatacccataggaatatccaaagatacaagacgagaatcctac
tctcagaataatctacattcaaagaatgcgtttggcccctttattgaccggaaatctaac
gacatcatggattctgatgtagacaataacagttcaaaaagctggtctcagtctgaggaa
atgcttcaagtaattggaacatctccctgcacagatacatttccattggaagacatgatt
gattctcctctaagaaatgacattatggcagatacagtggaatatgaggcagagtcatgg
agcttggcagttgaaccagaattctgcagcaagcaggaaaaatcgattattaaaagacag
gatgttatttatgaactgatgcagacagaaatgcaccacatccagaccctgatgatcatg
tctgaaatctttagaaaaggaatgaaggaggaagtgcagttagatcactgcattgtggat
cgtatcttcccttgcctggatgaactgtttgaaattcacaagagtttcttctccttgatg
acagagagacgacaggagtctatgacagaggatagtgacagaaattttgtaattgataga
attggtgatattcttttgcaacagttttcagaagaaagtgctgtcagaatgaaacaagtt
tatggagaattttgcagtcatcatatcgatgctgtaaactttttcaaagagcttcagcag
caaaacaagaaattcaacagttttatcaaacaacaaagcaacaatttccttgtccgacgg
agagaaattcctgaatgtatcttattggtgactcaacgactcacaaaatacccagtactg
ttggagaggattttgaaatattccaaagaaggctccgacgaacatgcagacctgacaaaa
tccttgggactagtaaaggatattattgctgcagttgatttaaaggttaatgaatatgag
aaagagcagaagttgcttgaaatcctcagtaaaattgacaacaagacatttgccaggctt
aaaaagggaaacttccggaagcatgatctgatgaacagaaagcgggttcttcaccatgaa
ggagttgttttctggaaaactgccactggaagattgaaagatatactggctctactactt
acagatgttttaatatttctacaagagaaggaccagaaatatgtatttgctgcagtggat
cagaagccaccagtcattccattacaaaaactaattgtaagagaagtagccaatgaggaa
agaggaatgtttttgattagtgcctccacttcaggtccagagatgtatgaaattcacacc
aataccaaagaggagcgcaacacctggatgcgactaattcgagaagctgtggaaagttgt
ccacaggaagaggataaggaaggtgaaactgaagaagacagacagatggcagaggcaagg
atacagaagatacacaaatatcaggaaagtttgcatagtcatgatgaacaaatttgccaa
agtctcgaagagaaattgaatatatacagcaagctcacagccctgaatttcccttgtcag
cctgtccaagagcaacacttactgatcaaacctgacccagaggaggtgccacaggcagct
gcccttttgacaactgctatcaaagaggctgaaagactacttagtacacttactttggaa
tccttctgttctgaggagagtattggagtgtcagattcatcagtaaaactgcaagattct
gaaagttgtgagagtattccagaatttccacatgaatccgtaaaattaaatgcccaaagt
tcttcctctttgacatctgaatttgaagtacgggaaggtgaattgtcataccctcatcag
tatgtaccagaagcacttaatgaatttcagccagggggcctcaaccatttggaactgaag
gtggcacaaagtgtgcagagtttgttacagctcatatacagtttacaggctgcagtgaca
attcaggacagttgctttgaagttcagaagctcctccttcaggaaactgaacgactgccc
agatatttttgtggtcgtggcaatcttttgctggaacaggggaggcaacgcaacatggag
aagcaccgagaagaactggccagtgtacaacaactgcagagtcagctgaggcaggagcag
caacgctgggaacgtgagtgtagtcaacttcagcgacagcaagtagaattggacaatgaa
ttggagcagcgagaacggaactgtgttttgcaaacagagcagttacgacgagaccgggaa
gatctagaaaatcaactgaaggaatatcaacagaatctggaaagattgcgagaaggacaa
caactggtagaaaaggacagggaagaattagacaagcagcaggcgcagctgcacggctgg
aaacacaagcggcaaagtagcctcccagttatgattacatttcctctagccaaaacacag
gtgccttctcatacccggaaagaaagtttagatgttcgtggttgtggctccatttatgtg
aatgaagctgcctttcagatgtcactgaataaccacccagagtccagtacctctgtaccc
tccgatacttccagtgttcataatagtttgaactccctgattgcagaagccaacaacatt
gtaagtgatcacagaactgaatacctttaccaaccacaaatttcctacaatgcaaatgct
tggccatcatgtacccagcagtggatacccactcatccagtcactccactaagaggagac
ctagcaggacctaacaacgatatcagtggacatatgtttgatgcaagccaatccatgcct
ggacaaagtgttgcatcaagtttaagtcaacagttttcacagtcttcagcagttaaatta
cagatcaatcaacagacatacatcagtgtggaaccagaaaatggactagatgggagtgaa
gaaaatattgtttacctctga
DBGET
integrated database retrieval system
