Polypterus senegalus (gray bichir): 120532447
Help
Entry
120532447 CDS
T08668
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120532447 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120532447 (utp15)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120532447 (utp15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_ACSF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR75_1st
PAC11
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR41
TRM82_WD
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_LRRK2
KNTC1_N
Utp8_C
Beta-prop_IFT140_2nd
Beta-prop_NUP159_NUP214
Beta-prop_At4g14310
Motif
Other DBs
NCBI-GeneID:
120532447
NCBI-ProteinID:
XP_039614384
LinkDB
All DBs
Position
7:complement(33111932..33145346)
Genome browser
AA seq
529 aa
AA seq
DB search
MTAYKPTKIQSYPKLGEKVTQDTIYWKNYKTPIQIKEFAAVTKIDFSPVPPYNYAVTASS
RIHIYGQYSQEPIKTFSRFKETAYSGSYRDDGKLLVAGSEDGLVRVFDLAGREALRKFSG
HTKAVHVANFTSGKYHIFSGGDDYSAKYWDMSTASELISYDEHTDYVRCGAASKLNPDMF
VTGSYDHTVRVFDARTDKSVLNMDHGQPVESVLLFPSGGLLVSAGGRYVKVWDLLKGGQQ
LVSLKNHHKTVTCLCLSSSGHRLLSGSLDRHIKVYSTTSYKVVHSFDYATSVLSLALAPE
DEVIAVGMTNGILNIRHRKQTEEKLLMENRKRRKPAYRYYVRGKNYRPKQDDLLVSKPVK
MHLKKYDRQLKSFEVTKALDTVLEPHIRIKTPEVTVAVLQELNRRGTLMNALAGRDEKNF
SILLNFLIRHIVDPRFARILITVADMVLDIYGSILGQSAVIDKQFVRLQELIEKELDYQQ
ELVEVLGMMDTLFATMTAKKEALAPQSRSNGPTEGQQHTEVMPDQEAMS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtataaacctactaaaattcaaagctacccaaagcttggagaaaaagttaca
caagacaccatctactggaaaaattataagacacccattcagattaaggagtttgctgct
gttacaaaaatagacttctctcctgttcctccctataactatgcagtaactgcttcatca
aggatccacatctatgggcagtattcccaggaaccgattaaaaccttctccagattcaaa
gaaactgcctactctggctcctacagggacgatggcaaactacttgtagcagggagtgag
gatggcttggtgcgagtgtttgatcttgctggaagggaagcactcaggaaattttcagga
catacaaaagctgttcatgtagcaaattttacatcaggcaaatatcacatattttctggt
ggggatgactactctgcaaagtactgggatatgtcaacagcatctgaattaatttcctat
gatgagcatacagattatgtcaggtgtggtgctgctagcaagctaaatcctgatatgttt
gtgacgggttcatatgatcacacagtaagggtttttgatgctcgcacagataaaagtgta
ttaaatatggatcatggccagcctgtagagagtgtgctccttttcccatcaggtggactc
ttggtgtctgcaggtggaagatatgtgaaagtctgggatttgttgaaaggcggtcagcag
ctcgtatcactgaaaaatcatcacaagacagtgacatgtctttgtctcagcagctctggt
cacaggttgctctcaggatcacttgacaggcatataaaagtatatagcacaacatcatac
aaagtagtgcatagttttgattatgccacatctgtcttgagtcttgctttagcaccagaa
gatgaagtaattgcagtggggatgacaaatggcatactcaatattcgtcacagaaaacaa
acagaagaaaaacttctaatggaaaatagaaaaagacgtaaaccagcctatcgttattat
gtgagaggcaagaactacaggccgaaacaggatgacctgctagtgagcaaacctgttaaa
atgcacttaaagaagtatgaccgacaacttaaaagctttgaagtgacaaaagcgcttgat
acagtccttgagcctcacattaggataaaaaccccagaagtaacagttgcagttcttcag
gaactgaatcggagaggtactttaatgaatgcattagcaggaagagatgagaagaacttt
tcaatactgctaaatttcttaatcaggcatatagttgatccaagatttgctcgaatttta
ataactgttgcggatatggtcttggacatctatggttccatacttggacaatctgcagtg
attgacaagcagtttgtacgactccaagagttaattgagaaggagttggactaccagcag
gaactggtagaagttctagggatgatggatactctgtttgcaacaatgacagcaaaaaag
gaagctctggcaccacaaagtaggtctaatggtcctacagagggacaacagcacactgaa
gtcatgcctgaccaagaagcaatgtcttaa
DBGET
integrated database retrieval system
