Polypterus senegalus (gray bichir): 120532468
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Entry
120532468 CDS
T08668
Symbol
zfr
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120532468 (zfr)
Spliceosome [BR:
psex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120532468 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
120532468
NCBI-ProteinID:
XP_039614423
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All DBs
Position
7:36002800..36106411
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AA seq
1075 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATSNYFGFTHGAAAAQYSQQPTAGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYQATHTAADYGYTQRQQ
EAPPPPPPATSQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAVAAAAAQPQPTVAESY
YQTAPKTGYSQGATQYTQTQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVGAAAAAAA
TVVPSYSQSPTYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQKQAAAAVAATAAW
TGSTFTKKTPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALK
ASQSTTSTTSGISARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIP
STEPSVVAQTSTSTTAAASKPTGSAITPGTNNNTASVTSTGGSSYLKPVNIVSSTVSNSV
LKTPSVIASSSIAAKKIAAPKICFVGGNKLQTTSSKLDEVKNDALKSVQTVTSTQTQETK
PDVTPEPVSASSTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMH
LKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMR
RYEEDMYWRRVEEEQHHWDDRRRIPDGVYPQGPPGPPGLLGVRPGMPIPQPQGPVPPRRP
DSSDDRYVMTKHAAIYPVEEELQAIQKIVSITERALKLVSDIITDQDKSKVKEEEKKDVQ
RDRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPNKNLLTRIVENLPKQLLLVTPEKY
EVKSSIQEAAIILTACAEPKMQVTITLTSPVIREENPRDGDVTSGMVKDPADVLDRQKCL
DALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSAFPSWAMELLVEKAISSASG
PLSPGDALRRVFECISSGILLPGGPGLIDPCERNPTDTLSSMTEQQREDITSSAQFALRL
LAFRQIHKVLGMDPLPQMNPRFNVRNNRKRRRDNSDGVDGFEGEGKKDKKDYDSY
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtctccttcacctatgtgcccagccggctaggtgaagat
gccaaaatggctaccagcaactactttggatttacccatggtgctgctgctgctcagtat
agccaacagccaacagctggggtagcctattcacacccgacaacagtggccagctatact
gtgcaccaggctccagttgctgcacacacagtgacggcagcctacgctccagcagccgcc
actgttgccgtggcaagaccagcaccagttgctgtggcagctgctgcaactgctgcagca
tatggtgggtaccaagccactcatactgcagcagactatggctacactcaaagacagcaa
gaagcaccacctccacctccgccggccacttctcaaaattaccaggattcttattcttat
gtgcgatccacagcaccagctgtggcctatgacagtaagcagtactaccagcagcctaca
gctacagcggctgtagctgcagctgctgcccaaccacaacctactgtagcggagtcctac
tatcagacagctcccaaaacaggatatagtcaaggtgcaacacagtacactcaaactcaa
caaactagacaagtaacagcaataaaaccagcaacacccagtcctgcaaccactactttc
tcaatctatcctgtgtcatccactgtgcagccagtgggcgccgccgcagcagcagctgct
actgttgtcccatcctattctcaaagccctacttacagtacaactgctgttacttactct
ggaacatcttattctggatatgaagcggcagtatattcagctgcatcatcttattaccag
cagcaacaacagcagcagcaaaaacaggcagcagctgctgtagcagcaacagctgcttgg
acaggtagcactttcacaaagaagacaccattccagaacaagcaacttaaaccaaaacag
cctcccaaaccaccacagattcattattgcgatgtgtgtaaaataagctgtgcaggacca
cagacctataaagaacatctagaaggtcagaagcataaaaagaaagaagcagctctaaaa
gcttcccagagcacaacgagcaccactagtggtatttcagctcggggaacccaaaaccag
ttacgctgtgaactctgtgatgtttcctgtacaggagctgatgcttatgctgctcatatc
agaggtgcaaaacaccaaaaggttgtaaagctgcataccaagcttggcaagccaattcca
tctactgaacctagtgtagttgcccagacctctacatccacaaccgcagctgctagcaag
ccaactggttcagccataacccctggaacaaacaacaatactgcctctgtcacctctact
ggaggttcatcctacttgaaacctgtcaatattgttagcagtacagtatctaatagtgtg
ctgaaaacaccttcagttattgcctcaagttccattgcagcaaaaaaaatcgctgccccc
aaaatatgttttgtaggtggtaacaagttacaaacaactagttcaaagttggatgaagtt
aaaaatgatgcattaaaatctgtacagaccgtaacatccactcagacacaagagactaag
cctgatgtgacaccagaaccagtttcagcatccagcacccttgctgccttacagagtgat
gttcaacctgtaggacatgattatgttgaagaggttagaaatgatgaagggaaagttatc
agattccactgcaaactttgtgaatgtagtttcaatgatccaaatgcaaaagagatgcac
ctgaaaggaagacgacacagacttcagtataagaaaaaagttaatccggatcttcaagtt
gaagtgaaaccaagcattagagctcggaagattcaagaggaaaagatgagaaaacagatg
caaaaagaagagtactggaggagacgagaagaagaggagcgttggagaatggaaatgaga
cgatatgaagaagacatgtactggagacgtgtggaagaggagcagcatcattgggatgat
cgtcgaagaattccagatggagtatatcctcaaggaccacctggacctccaggattacta
ggtgttcgacctggaatgcccattccacagcctcaggggccagtgccgcctcgtcgccca
gattcttcagatgatcgctatgttatgaccaaacatgctgctatttacccagtggaggaa
gagctccaggctatccagaaaattgtatctattactgagcgtgcacttaaacttgtgtca
gatatcattactgatcaggataaaagcaaagtcaaggaagaagaaaaaaaagatgttcaa
agagatcgggccttgaagggtgtaatgcgtgtgggagttcttgcaaaaggtctccttcta
aggggtgacaagaatgtgaatcttgtgcttctgtgctctgaaaagcctaacaagaatcta
ctgactcgcattgtagaaaacctccctaagcagcttttgcttgtaacaccggaaaaatat
gaggtgaaaagctcaatacaagaggcagccataatcttaacagcttgtgctgagccaaaa
atgcaggtgaccattacgctgacatctccagttatcagagaggaaaatccacgtgatgga
gatgtaacctcgggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgcctt
gacgctctggctgctctccgccacgctaagtggttccaggctagagccaatggacttcaa
tcctgtgtgataataatccgtattcttcgtgacctttgtcagcgtgtcccaacctggtca
gcatttccaagttgggcaatggaactgcttgttgaaaaggctataagcagtgcatctggt
cctttaagcccaggggatgctctgagaagagtttttgaatgtatttcttctggaattctt
ttgccaggtggtcctggtcttatagatccctgtgagagaaaccccacggacactctgagt
tcaatgacagagcaacagagggaagatataacctctagtgcacagtttgctctgagactg
cttgcattccgtcagattcacaaagttttgggaatggatcctttgccgcagatgaaccct
cgttttaatgtgcgcaacaacagaaaaaggagacgggacaacagtgatggtgtggatggg
tttgaaggagaaggcaagaaagacaaaaaagactatgatagctattaa
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integrated database retrieval system
