Polypterus senegalus (gray bichir): 120532488
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Entry
120532488 CDS
T08668
Symbol
cspg4ba
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psex00535
]
120532488 (cspg4ba)
04091 Lectins [BR:
psex04091
]
120532488 (cspg4ba)
Proteoglycans [BR:
psex00535
]
Cell surface proteoglycans
Others
120532488 (cspg4ba)
Lectins [BR:
psex04091
]
C-Type lectins
Others
120532488 (cspg4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
Motif
Other DBs
NCBI-GeneID:
120532488
NCBI-ProteinID:
XP_039614457
LinkDB
All DBs
Position
7:complement(40555752..40654767)
Genome browser
AA seq
2393 aa
AA seq
DB search
MGWILHNMGPFLWFGLALIPVGRLALAASFYGDGYVELKTVESSNRTSLHFRFRTSKPNG
LLFLAAGNHDYCLAELKSGHLQVKINLGSGERILHSDKANPLNDLAWHTVELQHDNNNVI
LTADKHFTSSVKMPGKRYELNIDDGLYVGGTGGLAKAYLINEPSNFRGCIDDLLFNQHNI
LSSLRSYYGFKNVYEVSLGCSPQFFANEEDPISFFSSKAFVSFPLWNTQEEGIFESVIHT
SSDQGVLLYSSGQKEDFVAMEIRSGILTAVIGKGGNKYELSSKIPVNDRKWHYVKLRLTS
KHLQLTLDQETEKRMLESRGKNLILRTPLYVGGIEDGMRAEVGKLGLTSILGRSYRGASF
KGCIKDIKINSERIGLNNATVTKDISVGCEPEKEPEPLTEVVPTIVNLSPTIAGVVTTTK
QPEKKRNQNFVVLRTLVVAEGGRGSLESKNIKLNLEFKALGLRQSQILFKIEEQPVHGQL
RLDVDEEQEENTFTMLDLWHGRVMYIHGGSEDPLDYFTFSVFTNSKKEVPSYLKGDKRYR
FNITVTPTNDAPELTLPEGNLFVVLENSKKRLTSDVLKAVDVDSNSTSLIFSLLGNLNSE
AGFLENSENPSKAITTFRQTDLEEGKIYYVHTGVRTSRIVLRVSDGEKISNTVVLRIMAV
PLDYKFANNTGIEVIQGGTALINNSHLAIQTNAVRQEIEIRFDITETPLYGEVQRWHPSG
EWKVTNMFSQRTLERERVRYVSTFRGQQRSDVSDQFKCKVSIGGLANDEVLFAIKVKWVQ
YKLLKNKALEIDKVKRMVFSQNNLNAILKGSKLAEHDLFYRVLTLPQKGRILLNNETVKE
KSVFSQKNVTDKKVEYELIDRPKNDSEDIFTFQLFSKYADSAVYKFKIVIKADMNSIILS
NNGLALLEGESKLITKSELFAETLNSKAIKYKVTNGPKHGNLKRINLSDSSSSNNNITDF
TNQDILDERIIYVHDDSESTHDEFIFIASIIDFTETEVLEAENAESEGTFSISIELKNDE
KPVRVVDKVFQVVRNGQRLLTTDDLCYHDADSDFNDGQLLYTRRGIPNGDLILVNNASQK
LYQFRQEDLEEKRVLFVHRGADYSRFVLFVTDGKHYTSSLLEVSAQEPFLKVSNNTGLLV
QKGKEANFSSANFSIVTNLDIRHNREITYEVFALPKFGRLYLKGLPVESFTHDDLEKGHL
VYHHDNSNNLVDKFSFTVKAEDVSLDASIHVRVYLESHQRPPKVVHNSSLLVEEGKPVKI
SKRKLEVVHEDSLPSEIVFTIKTPPHYGYIRSFAEGKEHYLGTEQTPITSFTQQDINDGN
IQYVQVAANQLTDDFVLDVTNEITEIKGILISIDIIPSVIPVQVLNFTIHEGSSKALTED
IIKVTNKHFAGLNFEYYVLDPPKHGYIENSRFPGMKLSHFTRKQVENEFIYYVHDNSESI
YDNFTIIANDTDLRKQSQPSTMHVNIIPVNDEAPAITTNKILRVWVDSVTEITGDDLNAE
DKDSSPAALEYIITPPSNGHLALKSATNRRILNFTQEHINQGQLVFVHNGAMSGGFNFQV
NDGMNFAPRQIFSITARTLVINMESNTPLRVFPGSRTTISADNLRAVTNDMAGNRTISYT
IVSSPKLGRLIRVGPNNSIVEISTFTQAMVDEGLIAYEQNNQDSIGWSLQDSFLFKVSSS
PASLETEIFNITVSYDNTGAERRSQLLQNSGAVVTEGDKVHIDKSKLDASNLLVKLPETQ
RHAYEIWYGVTSLPRHGVIVVGERNLTKEKPNFSQFILNKYGITYFHDNSESKEDSFTFE
VWLNLKSKTAIRPQDDGDVVEEIFNITIIPINDQPPELKTKTPRLSIVQGGKEAIGPQHL
NVIDKDNSPEELIYTIISKPNNGHLAMDISTNDSILTFTQADINSGKIWFVQDGSPSAGV
FYFSVTDGKHRPLYKLFNLDVIPITVFLSNNTGLSLEQGQSFVLVSSDQLAAETNGRSTA
IEYRVTRPPQFGQLLIDNSPVLLFGQQDINQGRLFYHFTDSTASEDSFEFAVFTAESNLT
DQVVNVTVKPLIIMRSDLKFLNEFASKLELEMLNATELARLSSSDPQFVISVPPYYGKIL
KSQKAKGTMEAVNSFTLQELKVGAVLLKSSANMTGHDVLNDSFTFVLRANNVQPAVGEFV
YAIIPYDPSLVPLYSTLKPPLTTLTLGNNHSISQVSLFPTTTEPKIVTQKSVKPVQKWKG
KNRWGDQDRSSVPEVTGTESAIRPRESTTKITAVRAETEASKATNPLFIILPVLACLLLT
IILVVLILVSRHKKEKQRPLIQNHPNNTGTAPSSPNLCAVERSLTVPSVTVTPLQNSATS
SPMMLGPRGTNILASGSPTDTSLRLCTWNNLDPETVKHCRTTNPTLRPNQYWV
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atgggctggattttacacaatatggggcctttcttgtggtttgggctggcgctgattccc
gtgggacggctagcgttagcagcctccttttatggtgatgggtacgtggaactcaaaact
gtggaatcctcaaaccgaacatcacttcatttcagatttcgcacctccaaaccaaatggc
cttctgttcttagctgctggaaatcatgactactgccttgctgaattaaagtctggtcac
ttacaggtaaaaatcaatctaggatcgggtgaacgcatattacactcagacaaagccaat
cctctgaacgatctggcatggcacacagtcgaacttcaacatgataacaacaatgtgata
cttacggctgacaagcattttacatcttctgttaaaatgccaggaaaacgatatgagctc
aatattgatgatggcctgtacgttggtggcacagggggcctagcaaaagcataccttatc
aatgaaccttccaacttccgtggctgtattgatgaccttttatttaaccagcataacatt
ttgtcttcattaaggtcttattatggatttaaaaatgtctatgaggtatcattaggatgc
agcccacagttttttgctaatgaagaggacccaatcagtttctttagctctaaagcattt
gtctcttttccactttggaatacacaagaagaaggaatatttgagtcggtaattcataca
tcatctgaccaaggcgttctcttatacagctctgggcaaaaagaagactttgtagcaatg
gagattcgaagtggaatacttactgcagtaataggaaaaggtggaaacaagtatgaactg
tcttccaaaattccagttaatgacagaaagtggcactatgttaaacttcgactcacttct
aaacaccttcagttgacattggatcaagaaacagagaaacgtatgctagagtctcgaggc
aagaatcttattttaagaaccccactttatgtgggaggaattgaggatggcatgcgtgct
gaggttggaaagctaggattgacttccatcttgggaaggagctacagaggtgcttctttt
aaaggttgtataaaagatatcaagattaactctgaaagaattggacttaacaatgcaaca
gttactaaagatatatctgtgggctgtgaacctgagaaggagccagagcctctcacagaa
gtagttcctacaatcgtcaatttatctccaacaattgcaggagttgttaccaccactaaa
cagccagaaaagaaacgcaaccaaaattttgttgtgctcagaactctagttgtagctgaa
ggtggtcgtggctcacttgaatcaaagaatattaaactcaatcttgagtttaaagcattg
ggtttacgtcagtcacagatcctgtttaagattgaagagcaaccagtacatggacagctg
aggctagacgtggatgaggagcaagaggaaaacaccttcacaatgttagatctatggcat
ggccgagtgatgtacattcatggtggatcagaggatcctctcgactattttacattctcc
gtgtttactaacagcaagaaagaagttccatcatatctaaaaggagataagaggtacaga
tttaacatcacagttacacctacaaatgatgctcctgagcttactctccctgaaggaaac
ctctttgtggtcttggaaaactcaaagaagcgtctcacgagtgatgtgctaaaagctgtg
gatgtagacagtaactcgacaagccttattttttcacttctaggaaacttgaattctgaa
gctggttttctggagaactctgagaatccgagtaaagccattacaactttccggcaaact
gacttggaagaaggcaagatatactatgttcatactggagtgcggacttccagaattgtg
ctgagagtcagtgatggtgaaaaaattagtaacactgtagtactgagaattatggcagta
ccacttgattataaatttgccaataatacaggaatagaagtgatacaaggaggcacggcc
ttgatcaataacagtcatttagcaattcaaaccaatgcagttagacaagagatagaaatt
cgttttgatattactgagacccccttgtatggtgaagtgcaaagatggcacccaagtggt
gaatggaaagtgactaatatgttttcccagcgcacacttgaacgtgaaagggtgagatat
gtcagcactttccgtggacagcagcgaagtgatgtttcagatcagtttaagtgtaaagtt
agtattggaggcttggcaaatgatgaggttttgtttgcaattaaagtcaaatgggttcag
tataaactcctaaagaataaagctctagagattgacaaagtgaaaagaatggtgtttagt
cagaacaacttgaatgccattttgaagggttcaaaactagcagaacatgatctgttttac
agagtgctgaccttaccccaaaaaggaaggattttgctcaacaatgaaactgtaaaagaa
aagtctgtctttagtcagaaaaatgtcacagataagaaagtagagtatgagcttattgac
aggccaaaaaatgactcggaagacatttttacttttcagttgttttccaagtatgcagat
tcggctgtttacaaattcaaaattgtgatcaaagcagatatgaacagcattattttgagt
aataatggtttggctttattggaaggagaaagtaagcttattacaaagagtgaactgttt
gctgaaactttaaactcaaaagctataaagtacaaagtcacaaatggccctaaacacggg
aatttaaagcgtattaacctgtctgattcttcttctagtaataacaatattactgatttc
accaatcaagatattctggatgagcgcattatttatgttcatgatgactctgaaagtact
catgatgagtttatttttattgcatccatcatcgacttcactgaaacagaagttctagaa
gcagaaaatgcagagtcagagggcacattcagcatttccattgagttgaagaatgatgaa
aagccagtccgtgttgttgataaagtgttccaagtggtcaggaatggccagaggctttta
actacagatgacctctgctaccacgatgcagactctgattttaatgatggtcagcttctc
tacactcgccgaggaattcctaatggtgaccttatccttgtcaacaatgcttcccagaag
ctctaccagttccgccaagaagatctggaggaaaaacgggtcttgtttgtacaccgtgga
gcagactacagtcggtttgtattgtttgttactgatggaaaacattacacatcttctcta
ttggaagtcagtgcccaggaaccctttttgaaagttagcaacaacacaggtttattggtt
caaaagggaaaggaggcaaattttagctcagcaaactttagcattgtgacaaacttagat
atacgacacaatagggagatcacttatgaagtgtttgctttgccgaaatttggtagactt
tacttaaaaggccttcctgtggaatcctttactcacgatgatttggaaaaaggccactta
gtctaccaccacgataacagcaacaaccttgtggataaattcagttttactgtgaaggct
gaagatgtaagtctggatgctagtattcatgtccgagtgtatctggagagccaccagcga
ccaccaaaagttgtgcacaacagtagcctcctggttgaagaggggaagccggtgaagatc
agtaaacgaaaacttgaggtagtgcatgaagacagcttaccatcagaaatcgtcttcacc
attaaaactccaccacattatggttacattcgaagctttgcagagggcaaagagcattac
ttaggaaccgaacaaacaccaattacgagctttactcagcaagacattaatgatggaaat
attcagtatgttcaggttgctgcaaatcagttgacagatgattttgtgctggatgtcacc
aatgagattacagaaatcaaaggaatcctgatctccattgacatcatacctagtgtcatt
cctgtgcaagtgctgaacttcacaatacatgaaggttcttccaaagcactgacagaagac
atcataaaagttactaacaaacattttgcaggtttgaactttgaatattatgtcctggat
ccaccaaaacatggctacattgaaaactctcgcttccctgggatgaagctgagccacttc
acaagaaagcaggttgaaaatgaatttatttattatgtccatgataacagtgaatccata
tacgacaatttcactatcatcgctaatgatacagaccttcgaaagcagagccagccatct
actatgcatgtgaatattattccggtgaatgatgaagctccagccattacaacaaacaaa
atactaagggtgtgggtggactcggttacagagataactggtgatgatctgaatgcagag
gataaggactcctcaccagcagcactagagtacataatcaccccgcctagtaatggccac
ctcgccctcaagagcgctacaaacagaaggatcctcaactttacacaggagcacatcaac
cagggacagctggtctttgtgcacaatggcgccatgtctgggggatttaactttcaggtc
aatgatggtatgaacttcgctccaagacagatatttagcatcactgccagaactcttgtt
atcaatatggagtcaaatacacccctcagagttttcccagggtcacgcacgaccatttct
gcagataacttgcgagcagttacgaatgatatggcaggaaaccgcacaatatcttatacc
attgttagttcacccaaactggggaggctaattcgagtgggtcctaataactcgatagta
gagatttccacgttcacacaagccatggttgatgaagggttaattgcatatgaacagaac
aaccaggactccataggatggagtttacaggactccttcctcttcaaggtgtcgtcttct
cctgctagtcttgaaactgaaatatttaatatcactgtctcttatgacaacacaggggca
gaacgtcgcagtcaacttctacaaaacagtggagcagtggtgacagaaggcgacaaagtc
cacattgacaaaagtaaactggatgcctcaaacctcttggtgaaactccccgagacgcag
cgacatgcctatgaaatctggtacggagtaacttccttacctaggcatggcgtcatcgtt
gttggagaacgcaatctcaccaaagaaaaacccaacttttctcagttcatccttaacaag
tatggaattacctacttccacgataactccgagtccaaagaagacagcttcacttttgag
gtgtggcttaacctaaagagtaagacagcaatcagacctcaggatgacggtgatgtggta
gaagaaattttcaatattactataattcctatcaatgaccagccaccagaactcaaaaca
aaaactccaagactcagcattgtccagggtggtaaagaagcaattggccctcaacattta
aatgtcattgataaggataattctccagaagagctcatatataccatcattagcaagcca
aataatggtcatcttgcgatggacatttcaacaaatgattccatcttaactttcactcag
gcagatattaacagtggcaaaatatggtttgttcaagatggaagtccatccgctggagtg
ttttactttagtgttacggatggtaaacaccggcctctttataaactcttcaacttggat
gtaattcctattacagtcttcctttcaaataacactggcctttctcttgagcagggtcag
tcctttgtacttgtcagcagtgatcagttagctgcagaaaccaatggaagaagtactgcc
attgagtaccgggtcactagacctcctcagtttggacagctcttaattgataatagtcca
gttcttctgtttggtcaacaggatatcaaccaaggtcggctgttttatcattttactgac
tctactgcctcggaggattcctttgaatttgcagtcttcactgctgagagtaacctgaca
gaccaggttgttaatgtgacagttaagccgttaattataatgagatctgacctgaaattt
ctaaatgaatttgcatcaaaactggagttggagatgctgaatgccactgaactggccagg
ctgagcagcagtgatcctcagtttgtaatatctgtaccaccatattatggcaaaattttg
aaatctcaaaaggctaaaggcacaatggaggctgtaaactcatttactcttcaagaactt
aaggtgggagctgtgctactgaaaagcagtgcgaatatgacaggccacgatgttctcaat
gactcatttacatttgttctgcgtgcaaataatgttcaacctgcagtgggggaatttgtc
tatgctattataccatatgacccatctttggtcccattgtacagtaccttaaaaccccct
ttaaccaccctgaccttgggtaataaccacagcatctcacaggtgtcactctttcctaca
acaacagaacctaaaatagtaactcaaaaatcggtcaagccagtccagaagtggaaaggg
aaaaacagatggggggaccaagatagaagctctgttcctgaagtaactgggacagaatcg
gccattagaccacgggagagtactaccaagataacggcagtcagggcagagactgaggcc
agcaaagccaccaacccacttttcattattcttcctgtattagcttgccttcttctcacc
attattcttgttgtgctaattttggtttctcgtcacaaaaaagaaaaacagaggccactg
atccagaaccatcctaacaacactggtacagctcccagtagtccaaacctttgtgcagtg
gaaagaagtttaacagttccatctgtcactgtgacaccgctgcagaacagcgccacatcc
agcccaatgatgctgggtcctcgtgggacgaacatcctggccagtggcagccctactgac
acctccctccgtctatgtacttggaacaatctcgacccggagacagtgaagcattgcagg
accacaaatcccaccctgcggccaaaccagtactgggtttag
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integrated database retrieval system
