Polypterus senegalus (gray bichir): 120532532
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Entry
120532532 CDS
T08668
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120532532 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psex01007
]
120532532 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120532532 (tars1)
Enzymes [BR:
psex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
120532532 (tars1)
Amino acid related enzymes [BR:
psex01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120532532 (tars1)
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120532532 (tars1)
Prokaryotic type
120532532 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
120532532
NCBI-ProteinID:
XP_039614535
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All DBs
Position
7:complement(49680493..49721464)
Genome browser
AA seq
721 aa
AA seq
DB search
MEDVADGIKQMKVEAEHKGCKEGKCTDGGKKKGKPTSDQDGRSELNPWPKYIEDRLALYN
KLKEENDLLLAEKSAKESKPIKVTLLDGKQIDAESWKTTPYKIACGISQGLADNIVISKV
NNEVWDLDRPLEGDCNLEFLKFDDEEAQAVYWHSSAHIMGEAMERIYGGCLCYGPPIENG
FYYDMFLDNDCVSSNDFPAIETLCKKIIKEKQLFERLEIKKETLLEMFKYNAFKCRILNE
KVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKAMKIHKNSSTYWEGKADMETLQRIYGISF
PDSKMLKEWEKLQEEAKNRDHRKLGKEQELYFFHELSPGSCFFLPKGAYIYNTLIEFIRS
EYRKRGFQEVVTPNVYNSKLWQTSGHWEHYSENMFSFEVEKEIFALKPMNCPGHCLMFDH
RPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMDQIEDEIKGCLDF
LRTVYDIFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWVLNPGDGAFYGP
KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLAYVSPDGNDKTRPVIIHRAILGSVERMIA
ILTENYGGKWPLWLSPRQVMVIPVGPTCEEYAQKVRQEFHSGGLMCDVDLDPSSTLNKKI
RNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGERSVKECIERLKQLKTTRCRNAEEE
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgttgcagatggtattaaacaaatgaaagtggaagctgagcacaagggatgt
aaagaggggaaatgcactgatggtgggaagaagaaaggtaaaccaacctctgaccaggat
ggccgttcagagctgaatccttggcccaagtatattgaagaccgtttagctctgtacaac
aaactgaaagaagagaatgatttactgcttgctgaaaagtctgcaaaagaaagtaagcct
atcaaagtcactcttctagatgggaagcagattgatgcagagtcttggaaaacaacacct
tacaagattgcttgtggtattagccagggcttggctgacaacatagtcatttctaaagta
aacaatgaagtctgggatctagatcgtccacttgaaggtgattgtaatttggaatttctc
aaatttgatgatgaggaggcccaggctgtgtactggcattcaagtgcccatataatgggt
gaagcaatggaaagaatctatggaggttgtttatgctatggtccacctattgagaatgga
ttttattatgatatgttccttgataatgactgtgtgtctagtaatgattttcctgccatt
gaaacactctgcaaaaaaataataaaagaaaaacaattatttgaaagacttgaaattaag
aaggaaactctgcttgaaatgtttaagtacaatgcatttaaatgtcgaattttgaatgaa
aaggtcaccaccccaacaactactgtgtacaggtgtggcccattaattgatctgtgcaga
gggccccatgtgagacatactgggaaaataaaagcaatgaaaatacataagaactcttct
acttactgggaaggaaaagctgacatggagactcttcagagaatttatggaatttccttc
ccagattctaaaatgttgaaggaatgggagaagctccaagaggaggcaaaaaacagagac
caccggaaactgggaaaagaacaagaactatatttcttccatgagctgagcccaggaagc
tgcttctttttgccaaaaggagcctatatttacaacaccttaattgaattcatcagaagt
gaatataggaaaagaggttttcaagaagtggtgaccccaaatgtgtataatagcaaatta
tggcagacgtctgggcattgggaacattacagtgaaaatatgttttcttttgaagtggaa
aaagaaatttttgctctgaagccaatgaactgccctggccactgtttgatgtttgaccat
cgacctcgttcatggagagagctccctttgcgcatggcagactttggggtgcttcaccgc
aatgagctctcgggggctttaactggacttacccgtgtccgccgctttcagcaggatgat
gcacacatcttttgtgctatggatcagattgaagatgaaattaagggttgcctggatttt
ctgcgcactgtctatgatatatttggtttctctttcaaacttaacctgtctactcgccct
gaaaaattccttggtgatatagaagtatggaaccaggctgagaagcaactggagaacagc
ttgaatgagtttggagaaaagtgggtgcttaacccaggagatggagcattttatggacca
aagattgatattcaaataaaggatgccataggaagataccaccagtgtgcaacaattcag
ttggatttccagcttccaatcagatttaatcttgcctatgtaagccctgatggaaatgac
aaaacaagacccgtcataattcaccgtgcgatccttggctctgttgagagaatgattgcc
attcttacagaaaattatggaggcaaatggcccctttggctttcaccacgtcaggtgatg
gtgattcctgttggtcccacatgtgaagagtatgcacaaaaggtgcgtcaagaattccat
agtggtggtcttatgtgtgatgttgatctggatcctagtagcactctaaacaagaaaatt
cgaaatgcccagttagcacaatataatttcattttagtggtcggtgagaaagaaaagagc
agtgatactgtaaatgtacgtacaagggacaacaaagtccatggtgaacgttcagtgaag
gagtgcatagaaaggctgaagcagctaaagacaacccgttgcagaaatgcagaagaggag
ttttaa
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