Polypterus senegalus (gray bichir): 120532785
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Entry
120532785 CDS
T08668
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120532785 (toporsa)
03036 Chromosome and associated proteins [BR:
psex03036
]
120532785 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psex03037
]
120532785 (toporsa)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120532785 (toporsa)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120532785 (toporsa)
UBL E3 ligases
120532785 (toporsa)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120532785 (toporsa)
Cilium and associated proteins [BR:
psex03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120532785 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
PWI_Topors
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
zf-RING_4
zf-RING_6
RING_ZNF598
PWI
Motif
Other DBs
NCBI-GeneID:
120532785
NCBI-ProteinID:
XP_039615098
LinkDB
All DBs
Position
7:111366263..111370870
Genome browser
AA seq
940 aa
AA seq
DB search
MVLSTKKSKMRRRNTVKDGSNKSSQTLPADASPDSKCPICLDQFNNMAYLDQCQHRFCFR
CIHEWSKNKAECPLCKQPFNKIFHSMKAKGDFQEFVLSENGSLNNSDGPRFRYRTTLTRE
HRQLNPRRLTSSPPDNGLLFEGLGSNPQPHNDRGAHRMMLRLAARRQAQPDGRSARVMQE
QNMINFRRALYRNGMRVRSVRDGGRYRDISADFFRRNPACLHRLVPWLRRELTVLYGAHG
SLINIVQHIIMTCITRCDMEDQSIQEELRPFLLTRTDHFMHEFISFARAPFSMEAYDRHA
VYDCPAPSYEEGSSSDSSVITISADEADSDDERKRSPASVPSVALSQAPWDDETPGPSYS
SAGQVQTTLLTPLESQSSEDEGEGGDAVCSVQDSAQVKSDPVVKELCDASALEEDCVIVG
YVKPIAERTPELVQLSSDSEESTQEGILDTAPLLQPKTSPSRDSSSSSVCSHISNEEPSQ
RTNKSKKQTNNKNRGTNNLKHDEQSFKLSHSFHQNKSSKRTDDDRSSSKKRHHQDHTAHH
RRHRSRERKSKSKDRLRTRHKRRSRSTDNWCEKSQSVSLTSCNLLPRGRRHSRSGSREYS
SRDFHPRNRDIDNKYSRYKHEKSYSYSWDSYNSYSRERVLGDSLHIQSRSYCSNYYTAPD
YRVQSRSSSRSHQDNSYRGRRRSRSFSSSSSQGSTAIHCQTRHEKPSGKRKYKTHHLEST
SKERRKSRGSPLRSRDQNQHKNLRKSRSPSVVIVYEKKSTSDGRRRHKKKLHKKRNRRQS
SKVRDDNLSPAVITIHSDSDCDHSPKSASPPTQDQLQNKKNSTDEISPSINNLNEDCELS
CAQITTACAVSENDLGSAPIDDVSINNTSSINNNDIMQNLCPMDYVTSDTQRNANDLIAV
EQFDEVNCFENTPDETMSLSTSQESIFDFKLDASQMTSSV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggtgctatctactaaaaagtcaaaaatgcgcagaaggaacactgttaaggatggatca
aacaaatcttcacagactttaccagcagatgcctctccagattccaaatgtcccatctgt
cttgaccagttcaataatatggcatatctagatcaatgccagcacagattctgttttcga
tgtatccacgagtggtcaaaaaacaaagcggagtgccccttgtgcaagcaaccttttaat
aaaatttttcatagtatgaaagcaaagggtgactttcaagaatttgtgctttctgagaat
ggctctctcaacaattctgatggccctaggttcagataccgaaccactctgactagggag
cacagacagttaaatccacgcagacttacttcatcccctccagacaatggcctacttttt
gagggacttggttctaatcctcagccccataatgatcgaggtgctcaccgaatgatgctt
aggcttgcagctagaaggcaagctcagcctgatggcaggtcagcaagggttatgcaggag
cagaacatgatcaattttaggcgagcactataccgaaatggtatgcgtgttcgatctgta
cgtgatggtggccgctacagagacatttcagctgatttttttaggagaaatccagcttgt
cttcatcgactggtcccttggttgagacgtgagctaactgtgctatatggtgctcatgga
tctctgattaacattgtgcagcacattattatgacatgtataactagatgtgatatggaa
gaccaatccatccaagaggaattaaggccatttttattaacacgcacggatcattttatg
catgagtttattagttttgctcgtgccccatttagtatggaggcatatgatcgtcacgct
gtgtatgactgtcctgcaccatcctatgaagaaggaagtagttcagattcatctgtcata
actatatctgcggatgaagcagattctgatgatgagagaaaaagatcacctgcatctgtg
cctagtgttgctcttagccaggctccctgggatgatgaaactcctggtccatcttattca
tctgcaggtcaggttcagaccactttattgactccacttgaatctcaaagcagtgaggat
gaaggagaaggaggcgatgcagtttgctcagtacaagacagtgctcaggtcaagagcgat
ccagtagttaaagaattgtgtgatgcttctgccttagaagaagactgtgttattgttggc
tatgttaaaccaattgcagaaaggactccagagttagttcagctgtcttctgattctgag
gaatcaacgcaagaaggtatcttagacactgctcctctacttcagcctaaaacttccccc
agtagagacagctcctcttcctctgtttgttcacatatttccaatgaagaaccttcccag
agaacaaacaagtctaaaaaacaaactaataacaaaaacagaggtaccaataatttaaaa
catgacgagcagtctttcaagctatctcactcctttcatcaaaataaaagttccaaacga
actgatgatgataggtcttcgagcaaaaagagacatcatcaggaccatacagcacatcac
aggagacatcgttctagagaaagaaagtcgaagagcaaagatagattgagaacaaggcac
aaaaggagatctagaagtacagataactggtgtgaaaaaagtcagtctgtatcactgacc
agttgcaacttgctgcctagaggaagaaggcactcaagatctggaagcagagagtacagt
tctagagattttcatccaaggaacagagacattgacaataaatactctcgatataaacat
gagaaatcttattcatacagttgggattcctacaatagctacagtagagagagagtactc
ggtgattcattacatatacagagtaggtcttactgttcaaactactatacagctccagac
tatagggtccagtcccggtcaagcagtagaagccatcaagacaacagttacagaggacga
cggcggtctaggagcttttcaagtagcagttcccagggttctactgccatccattgtcaa
accagacatgagaaaccaagtggaaagaggaagtataaaactcatcacttggaaagtacc
tcaaaagaaagaagaaaatctcggggttcaccactacgcagccgggatcagaaccaacac
aagaatttaaggaaaagccggagtccaagtgtggtaattgtttatgaaaagaagtctaca
agtgatggcagacgacgtcacaagaaaaagttgcataaaaaaagaaaccggagacaatcc
agcaaagtaagagatgataacttgtctcctgctgttatcacaattcatagtgacagtgat
tgtgatcattctccaaaatctgccagtcctccaacacaagatcagttacagaacaagaaa
aatagtacagatgagatatctccatccataaataacttaaatgaggactgtgagctttct
tgtgcacaaattactactgcatgtgctgtttctgaaaatgatttgggttctgcacctata
gatgatgtttctattaacaacaccagttccataaataataatgacataatgcaaaaccta
tgcccaatggattatgttacttcagatacacagagaaatgcgaatgatttaatagcagta
gaacaatttgatgaagttaattgttttgaaaacactcctgacgagacaatgtcactaagc
acctcccaagagtccatatttgatttcaaacttgatgcttcacaaatgacttcatctgtt
taa
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