Polypterus senegalus (gray bichir): 120532792
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Entry
120532792 CDS
T08668
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03030
DNA replication
psex03410
Base excision repair
psex03420
Nucleotide excision repair
psex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120532792 (rfc4)
03410 Base excision repair
120532792 (rfc4)
03420 Nucleotide excision repair
120532792 (rfc4)
03430 Mismatch repair
120532792 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psex03032
]
120532792 (rfc4)
03036 Chromosome and associated proteins [BR:
psex03036
]
120532792 (rfc4)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120532792 (rfc4)
DNA replication proteins [BR:
psex03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120532792 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
120532792 (rfc4)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120532792 (rfc4)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120532792 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
120532792 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_30
AAA_16
AAA_assoc_2
AAA_22
AAA_11
AAA_14
Mg_chelatase
AAA_24
DUF815
AAA_28
SLFN-g3_helicase
RuvB_N
AAA_19
Gp44_lid
DNAX_ATPase_lid
AAA_5
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
120532792
NCBI-ProteinID:
XP_039615109
LinkDB
All DBs
Position
1:140489554..140549392
Genome browser
AA seq
359 aa
AA seq
DB search
MQAFLKGTSSISSKPQKDKSAAGSSAEIKIKSVPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVVREKVKT
FAQLAVAGTRTDGKLCPPFKIVILDEADSMTNAAQAALRRTMEKESKTTRFCLICNYVSR
IIEPLTSRCSKFRFKPLSDKVQEKRLLDICQKEGLHYTQEAIKALVQVSEGDLRKAITFL
QSCARLMGGLEITDSIVVEIAGVVSDKMIDSLLQSCYSSSFEKLEVSVKNMVNEGFAATQ
IINQLHDNLVKREDLNDKQKSAIAEKLAEVDKCLSDGADEYLQLMALCSVIMQHITQCN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctttctaaagggaacctcttccattagttcaaagcctcaaaaagacaagtca
gctgcaggatcaagtgcggaaatcaagataaaatctgtaccatgggttgaaaaataccga
ccaaaatgtgttgatgaagtagctttccaggaagaagtggtagctgttctgaagaagtca
ttagagggcgctgatcttcccaatttgctcttctatggccctccgggaactgggaagaca
tccactatcttggcagcagcaagagagctctatggaccagagctgtttcggcaaagagta
ttagaactaaatgcttcagatgagcgtggtattcaagttgttagagaaaaggttaagact
tttgcacagctggccgtggctgggacacgtacagatggcaagctgtgccctccatttaaa
atagtgatcttggatgaagcagattccatgactaatgctgctcaagctgcgcttcgacgt
accatggaaaaagagtcaaaaactacgcggttctgtctgatttgtaattatgttagcaga
atcattgagccgctcacatctcgatgttctaagtttcgtttcaagcctttatcagacaag
gtgcaggaaaagcgacttttagacatttgtcagaaagaaggcctccattatacacaagag
gcaattaaagcacttgtgcaggtttctgaaggcgatttacgaaaagctatcacctttcta
caaagttgtgcacggctcatgggtggtttggaaattacagatagtattgttgttgaaatt
gctggggtggtttccgacaagatgattgatagtcttttgcagtcttgctacagcagttcg
tttgagaaactagaagtgtctgtgaagaatatggttaatgaaggatttgcagccacacag
ataatcaaccagcttcatgacaaccttgttaaaagagaagatctaaatgacaagcagaaa
tcagcaattgcagagaagcttgcggaagtggacaaatgcttgtctgatggtgctgatgaa
tatttgcaactaatggccctctgttcagtaattatgcagcatatcacacagtgcaactga
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integrated database retrieval system
