Polypterus senegalus (gray bichir): 120532810
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Entry
120532810 CDS
T08668
Symbol
npnta
Name
(RefSeq) nephronectin a isoform X1
KO
K06824
nephronectin
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04512
ECM-receptor interaction
psex04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120532810 (npnta)
04518 Integrin signaling
120532810 (npnta)
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
MAM
cEGF
FXa_inhibition
EGF_3
EGF
EGF_PEAR1L
JAG1-like_EGF2
EGF_2
EGF_DL_JAG
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
120532810
NCBI-ProteinID:
XP_039615133
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Position
7:119906297..120082471
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AA seq
594 aa
AA seq
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MDVMLRIAFLSALYLRATGDFDGRWPRQLASSNGLCRYGARIDCCWGWTRQSWGQCQPLF
VLTHRVVGIKCQPQALCQPGCKHGECVGPNKCKCYPGYTGKTCNQDEWEYATPPLWDTFP
PLFLPVDPPPPAGAPAADFNECGLKPRPCKHRCMNTYGSYKCYCLNGYMLMPDGTCGNAR
SCSMANCQYGCDVVKGEVRCRCPSPGLQLGPDGRSCVDVDECTMGTAVCPRFRKCINTFG
SYICKCHEGFDLQYVNGKYQCIDVNECLSSQHKCSAFAACYNTPGSYKCKCKGGFRGTGF
DCKPIPKVNIDPYLPFKNNKPNNTNKIPDSDSKRKFTTPHSPITSKKPATTPAKPATTIT
TKVIRPAALTTKQMELTPLPTTSPPEVSTVDNRIQKEVTPKQRGDVHIPRRPNGNNIIGK
IDIELGNTAEDEEQVKDDSDVLIHSCNFDHGLCGWMRNTEGDLHWETITSSSGGKYLTIP
DIGGKRGGRVALLILPLTELEYESDLCLSFSHKLLGHNAGTLQVYVKRNGALGPAVWGRT
SGNGWRQTQITLSGASLQSVIFKGERGKERMGEVGLDDINLRRGTCSDKHLRRH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaatgctcaggattgcgtttctgtccgcgctttacctaagagcgacaggagac
tttgacggcaggtggcctagacagctggcttcttcaaatggattgtgccgttacggagct
cgaatcgactgctgctggggatggacaagacagtcctggggccagtgtcagcctctcttc
gtcctaacgcacagagtagtcgggataaagtgccagccccaagcattgtgccagccaggt
tgcaaacatggggaatgcgttggaccaaataagtgcaaatgctacccgggatatactggc
aaaacctgcaatcaggatgaatgggagtatgccacccctccactgtgggacacttttcct
cctctctttctccctgtggatcctccaccaccagcaggtgcccctgcagcggatttcaat
gagtgtggactgaagccgcgaccctgtaaacacaggtgtatgaacacctatgggagctac
aaatgctactgcttgaatggctacatgctcatgcctgatggaacatgtggaaatgcccgc
tcctgttccatggcaaactgtcagtatggttgtgatgtggtgaaaggagaagtgcgctgt
cgctgtccttcgccaggactgcagctgggtcccgatggcaggagctgtgtagatgtggat
gagtgtacaatgggaacagcagtgtgccccagatttcgtaagtgcatcaacacttttgga
agctacatctgcaaatgccacgaggggtttgacctccaatatgtcaatggcaaataccag
tgcatagatgtgaatgagtgcctgtcctcccagcataagtgcagtgcctttgccgcctgc
tataacacaccaggctcatataaatgcaaatgtaagggaggattcaggggaacaggcttt
gactgcaaacccataccgaaggtcaacatagatccataccttccctttaaaaacaacaaa
cccaacaacacaaataaaattccggattccgatagtaaaagaaaattcactaccccacat
tcaccgataacaagtaaaaaacctgcaactactcctgcaaagccagccactactatcacc
acgaaagtaatccgtcctgcagccctcacaacgaaacaaatggagttgactcccctgcct
accaccagcccaccggaggtcagtactgtggataacaggatacagaaggaagtcactccg
aaacagagaggggatgtccacattcctcggaggccaaacgggaacaacataattggaaaa
attgacattgagttggggaacacggcagaagatgaggagcaggtcaaggatgattcagat
gttcttattcacagctgtaattttgaccatggtctgtgtggatggatgagaaacaccgaa
ggggatttgcactgggagaccatcacaagttcctcaggtggcaagtacttaaccattcca
gacattgggggtaaacgaggtggcagagtggcactgctgatcctgcctttaacagagctg
gaatatgaaagtgacctgtgcctttcattcagccacaaactcttgggccacaatgctggc
accctgcaggtgtacgtgaagaggaatggagcacttggtccagcagtgtggggacgaaca
agtgggaatggctggaggcaaacacagatcacactgtcgggggctagccttcagagtgtc
atatttaaaggtgaaagaggcaaggagaggatgggtgaagttggcctggatgacattaac
ttgaggagaggcacttgctctgataaacatctgcgaagacattaa
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